RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 LRTM2Q8N967 370 aa11.64□□□□□ -0.55
SF3B2-202ENST00000524475 OR52E5Q8NH55 327 aa11.64□□□□□ -0.55
SF3B2-202ENST00000524475 PEF1Q9UBV8 284 aaKnown RBP11.64□□□□□ -0.55
SF3B2-202ENST00000524475 SHPKQ9UHJ6 478 aa11.64□□□□□ -0.55
SF3B2-202ENST00000524475 FBXL7Q9UJT9 491 aa11.64□□□□□ -0.55
SF3B2-202ENST00000524475 F11RQ9Y624 299 aaKnown RBP11.64□□□□□ -0.55
SF3B2-202ENST00000524475 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.63□□□□□ -0.55
SF3B2-202ENST00000524475 LYRM1O43325 122 aa11.63□□□□□ -0.55
SF3B2-202ENST00000524475 REG1AP05451 166 aa11.63□□□□□ -0.55
SF3B2-202ENST00000524475 IGLL1P15814 213 aa11.63□□□□□ -0.55
SF3B2-202ENST00000524475 ZNF846Q147U1 533 aa11.63□□□□□ -0.55
SF3B2-202ENST00000524475 OXLD1Q5BKU9 147 aa11.63□□□□□ -0.55
SF3B2-202ENST00000524475 C19orf35Q6ZS72 473 aa11.63□□□□□ -0.55
SF3B2-202ENST00000524475 OR2C3Q8N628 320 aa11.63□□□□□ -0.55
SF3B2-202ENST00000524475 SLC35G3Q8N808 338 aa11.63□□□□□ -0.55
SF3B2-202ENST00000524475 OR1P1Q8NH06 330 aa11.63□□□□□ -0.55
SF3B2-202ENST00000524475 RNASE11Q8TAA1 199 aaKnown RBP11.63□□□□□ -0.55
SF3B2-202ENST00000524475 CXorf58Q96LI9 332 aa11.63□□□□□ -0.55
SF3B2-202ENST00000524475 ATP6V0BQ99437 205 aa11.63□□□□□ -0.55
SF3B2-202ENST00000524475 PLEKHA3Q9HB20 300 aa11.63□□□□□ -0.55
SF3B2-202ENST00000524475 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.63□□□□□ -0.55
SF3B2-202ENST00000524475 DMRT1Q9Y5R6 373 aa11.63□□□□□ -0.55
SF3B2-202ENST00000524475 PRKDCP78527 4128 aaKnown RBP11.62□□□□□ -0.55
SF3B2-202ENST00000524475 ST8SIA3O43173 380 aa11.62□□□□□ -0.55
SF3B2-202ENST00000524475 SFT2D2O95562 160 aa11.62□□□□□ -0.55
SF3B2-202ENST00000524475 HOXD3P31249 432 aaPredicted RBP11.62□□□□□ -0.55
SF3B2-202ENST00000524475 INSL3P51460 131 aa11.62□□□□□ -0.55
SF3B2-202ENST00000524475 IZUMO4Q1ZYL8 232 aa11.62□□□□□ -0.55
SF3B2-202ENST00000524475 NMSQ5H8A3 153 aa11.62□□□□□ -0.55
SF3B2-202ENST00000524475 Q6ZRM9 215 aa11.62□□□□□ -0.55
SF3B2-202ENST00000524475 VN1R17PQ8TDU5 208 aa11.62□□□□□ -0.55
SF3B2-202ENST00000524475 PDCD10Q9BUL8 212 aa11.62□□□□□ -0.55
SF3B2-202ENST00000524475 HINT2Q9BX68 163 aa11.62□□□□□ -0.55
SF3B2-202ENST00000524475 TRBV7-1A0A0A6YYK4 115 aa11.61□□□□□ -0.55
SF3B2-202ENST00000524475 OVOL1O14753 267 aa11.61□□□□□ -0.55
SF3B2-202ENST00000524475 NDUFB8O95169 186 aa11.61□□□□□ -0.55
SF3B2-202ENST00000524475 MECP2P51608 486 aaKnown RBP11.61□□□□□ -0.55
SF3B2-202ENST00000524475 SLURP1P55000 103 aa11.61□□□□□ -0.55
SF3B2-202ENST00000524475 RAB25P57735 213 aa11.61□□□□□ -0.55
SF3B2-202ENST00000524475 SPCS3P61009 180 aa11.61□□□□□ -0.55
SF3B2-202ENST00000524475 ERHP84090 104 aaKnown RBP11.61□□□□□ -0.55
SF3B2-202ENST00000524475 DEFA5Q01523 94 aa11.61□□□□□ -0.55
SF3B2-202ENST00000524475 EGFEM1PQ0D2K5 195 aa11.61□□□□□ -0.55
SF3B2-202ENST00000524475 PPP1R1AQ13522 171 aa11.61□□□□□ -0.55
SF3B2-202ENST00000524475 C9orf66Q5T8R8 295 aa11.61□□□□□ -0.55
SF3B2-202ENST00000524475 DCUN1D4Q92564 292 aa11.61□□□□□ -0.55
SF3B2-202ENST00000524475 DLX4Q92988 240 aaPredicted RBP11.61□□□□□ -0.55
SF3B2-202ENST00000524475 EEF1AKMT3Q96AZ1 226 aa11.61□□□□□ -0.55
SF3B2-202ENST00000524475 GPR146Q96CH1 333 aa11.61□□□□□ -0.55
SF3B2-202ENST00000524475 ZMAT5Q9UDW3 170 aaKnown RBP11.61□□□□□ -0.55
SF3B2-202ENST00000524475 CACNG5Q9UF02 275 aa11.61□□□□□ -0.55
SF3B2-202ENST00000524475 LINC00854A0A1B0GVQ3 168 aa11.6□□□□□ -0.55
SF3B2-202ENST00000524475 IFNA17P01571 189 aa11.6□□□□□ -0.55
SF3B2-202ENST00000524475 SULT1A3P0DMM9 295 aa11.6□□□□□ -0.55
SF3B2-202ENST00000524475 SULT1A4P0DMN0 295 aa11.6□□□□□ -0.55
SF3B2-202ENST00000524475 SLC25A6P12236 298 aa11.6□□□□□ -0.55
SF3B2-202ENST00000524475 VAMP1P23763 118 aa11.6□□□□□ -0.55
SF3B2-202ENST00000524475 MFAP2P55001 183 aa11.6□□□□□ -0.55
SF3B2-202ENST00000524475 KLF5Q13887 457 aaPredicted RBP11.6□□□□□ -0.55
SF3B2-202ENST00000524475 PVRIGQ6DKI7 326 aa11.6□□□□□ -0.55
SF3B2-202ENST00000524475 CCDC140Q96MF4 163 aa11.6□□□□□ -0.55
SF3B2-202ENST00000524475 A0A1B0GU03 582 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 ANKRD34BA5PLL1 514 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 SEC14L6B5MCN3 397 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 BMPR1BO00238 502 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 UPK1BO75841 260 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 TRBV12-3P01733 135 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 ASAH1Q13510 395 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 SMCO1Q147U7 214 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 BSXQ3C1V8 233 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 ANKRD55Q3KP44 614 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 SLC25A24Q6NUK1 477 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 REC114Q7Z4M0 266 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 LYZL2Q7Z4W2 148 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 C1QL4Q86Z23 238 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 ZNF502Q8TBZ5 544 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 TMED3Q9Y3Q3 217 aa11.59□□□□□ -0.55
SF3B2-202ENST00000524475 C9orf170A2RU37 121 aa11.58□□□□□ -0.56
SF3B2-202ENST00000524475 MFSD2BA6NFX1 497 aa11.58□□□□□ -0.56
SF3B2-202ENST00000524475 GGCTO75223 188 aaKnown RBP11.58□□□□□ -0.56
SF3B2-202ENST00000524475 FCGR2BP31994 310 aaPredicted RBP11.58□□□□□ -0.56
SF3B2-202ENST00000524475 DHRS2Q13268 280 aa11.58□□□□□ -0.56
SF3B2-202ENST00000524475 RPEL1Q2QD12 228 aa11.58□□□□□ -0.56
SF3B2-202ENST00000524475 ACSM6Q6P461 480 aa11.58□□□□□ -0.56
SF3B2-202ENST00000524475 C20orf85Q9H1P6 137 aa11.58□□□□□ -0.56
SF3B2-202ENST00000524475 PRR13Q9NZ81 148 aa11.58□□□□□ -0.56
SF3B2-202ENST00000524475 TBC1D24Q9ULP9 559 aa11.58□□□□□ -0.56
SF3B2-202ENST00000524475 FLVCR2Q9UPI3 526 aa11.58□□□□□ -0.56
SF3B2-202ENST00000524475 K7EIM0 57 aa11.57□□□□□ -0.56
SF3B2-202ENST00000524475 CORTO00230 105 aa11.57□□□□□ -0.56
SF3B2-202ENST00000524475 PITX3O75364 302 aa11.57□□□□□ -0.56
SF3B2-202ENST00000524475 HLA-AP01891 365 aaKnown RBP11.57□□□□□ -0.56
SF3B2-202ENST00000524475 TCRBP04435 133 aa11.57□□□□□ -0.56
SF3B2-202ENST00000524475 OR4E1P0C645 316 aa11.57□□□□□ -0.56
SF3B2-202ENST00000524475 SNCAP37840 140 aa11.57□□□□□ -0.56
SF3B2-202ENST00000524475 HOXA1P49639 335 aaPredicted RBP11.57□□□□□ -0.56
SF3B2-202ENST00000524475 SUB1P53999 127 aaKnown RBP eCLIP11.57□□□□□ -0.56
SF3B2-202ENST00000524475 DEFA6Q01524 100 aa11.57□□□□□ -0.56
SF3B2-202ENST00000524475 TATDN3Q17R31 274 aa11.57□□□□□ -0.56
SF3B2-202ENST00000524475 MZT2BQ6NZ67 158 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms