RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 TMEM56-RWDD3S4R434 201 aa3.33□□□□□ -1.88
NPM1-212ENST00000524204 RFX7Q2KHR2 1363 aa3.33□□□□□ -1.88
NPM1-212ENST00000524204 CHD8Q9HCK8 2581 aa3.33□□□□□ -1.88
NPM1-212ENST00000524204 ARAP2Q8WZ64 1704 aa3.33□□□□□ -1.88
NPM1-212ENST00000524204 ECM29Q5VYK3 1845 aa3.33□□□□□ -1.88
NPM1-212ENST00000524204 RIF1Q5UIP0 2472 aaKnown RBP3.32□□□□□ -1.88
NPM1-212ENST00000524204 IGHV1-3A0A0C4DH29 117 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 IGSF23A1L1A6 192 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 PRORSD1PA6NEY8 169 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 EFCAB10A6NFE3 127 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 OR5H14A6NHG9 310 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 LEUTXA8MZ59 168 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 SLC17A3O00476 420 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 KPNA4O00629 521 aaPredicted RBP3.32□□□□□ -1.88
NPM1-212ENST00000524204 ARPC5O15511 151 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 ZNF207O43670 478 aaKnown RBP3.32□□□□□ -1.88
NPM1-212ENST00000524204 C1QBP02746 253 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 PPBPP02775 128 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 CPMP14384 443 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 ATP6V0CP27449 155 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 RPS20P60866 119 aaKnown RBP3.32□□□□□ -1.88
NPM1-212ENST00000524204 DEFA6Q01524 100 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 SURF2Q15527 256 aaPredicted RBP3.32□□□□□ -1.88
NPM1-212ENST00000524204 C12orf74Q32Q52 190 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 CCDC153Q494R4 210 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 CCDC58Q4VC31 144 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 ZNF678Q5SXM1 525 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 C9orf64Q5T6V5 341 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 LINC01560Q8TB33 94 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 SLC25A46Q96AG3 418 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 PEBP4Q96S96 227 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 TSC22D3Q99576 134 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 SHANK2-AS3Q9BTD1 123 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 TMEM138Q9NPI0 162 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 TNFRSF19Q9NS68 423 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 GSKIPQ9P0R6 139 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 TAAR3PQ9P1P4 343 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 COQ4Q9Y3A0 265 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 DLG5Q8TDM6 1919 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 MYO9BQ13459 2157 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 SPTBN4Q9H254 2564 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 EPG5Q9HCE0 2579 aa3.32□□□□□ -1.88
NPM1-212ENST00000524204 BRWD1Q9NSI6 2320 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 IGHV3OR15-7A0A075B7D8 119 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 TRBV6-6A0A0A6YYG2 114 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 IZUMO1RA6ND01 250 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 COX7A2LO14548 114 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 FSTL3O95633 263 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 RBP1P09455 135 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 CD7P09564 240 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 CD28P10747 220 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 PTHLHP12272 177 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 PPIBP23284 216 aaKnown RBP3.31□□□□□ -1.88
NPM1-212ENST00000524204 OPRM1P35372 400 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 OPRK1P41145 380 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 RPS10P46783 165 aaKnown RBP3.31□□□□□ -1.88
NPM1-212ENST00000524204 PSG7Q13046 419 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 PDGFRLQ15198 375 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 RHEBQ15382 184 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 CST6Q15828 149 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 RNF212Q495C1 297 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 SPINK14Q6IE38 97 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 Q6ZS49 121 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 Q8N7P7 452 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 GPR119Q8TDV5 335 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 RAB2BQ8WUD1 216 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 ITLN2Q8WWU7 325 aaPredicted RBP3.31□□□□□ -1.88
NPM1-212ENST00000524204 MAL2Q969L2 176 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 MALSU1Q96EH3 234 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 RMND5BQ96G75 393 aaPredicted RBP3.31□□□□□ -1.88
NPM1-212ENST00000524204 NDFIP1Q9BT67 221 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 RSPO3Q9BXY4 272 aaPredicted RBP3.31□□□□□ -1.88
NPM1-212ENST00000524204 ZNF355PQ9NSJ1 428 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 MED29Q9NX70 200 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 OR52A1Q9UKL2 312 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 MRPS16Q9Y3D3 137 aaKnown RBP3.31□□□□□ -1.88
NPM1-212ENST00000524204 XIRP2A4UGR9 3374 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 CHD7Q9P2D1 2997 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 TPRP12270 2363 aaKnown RBP3.31□□□□□ -1.88
NPM1-212ENST00000524204 ZNF318Q5VUA4 2279 aa3.31□□□□□ -1.88
NPM1-212ENST00000524204 MGAMO43451 1857 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 PLXNB2O15031 1838 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 DDX60LQ5H9U9 1706 aaKnown RBP3.3□□□□□ -1.88
NPM1-212ENST00000524204 CACNA1BQ00975 2339 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 DNAH12Q6ZR08 3092 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 IGHV3-21A0A0B4J1V1 117 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 IGHV3-43A0A0B4J1X8 118 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 ARL5CA6NH57 179 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 PHOX2AO14813 284 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 MED6O75586 246 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 NRASP01111 189 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 HRASP01112 189 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 KRASP01116 189 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 APOA2P02652 100 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 ELK1P19419 428 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 GLRXP35754 106 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 SRP9P49458 86 aaKnown RBP3.3□□□□□ -1.88
NPM1-212ENST00000524204 DAPP51397 102 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 AKR1C2P52895 323 aa3.3□□□□□ -1.88
NPM1-212ENST00000524204 TAS2R45P59539 299 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms