RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 NUP160Q12769 1436 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 KIF24Q5T7B8 1368 aa1.2□□□□□ -2.22
LMNB1-207ENST00000494185 OTOFQ9HC10 1997 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 GPR179Q6PRD1 2367 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 A0A0J9YY10 115 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 A0A1B0GX78 115 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 OR2J2O76002 312 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 ZNF682O95780 498 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 SOD1P00441 154 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 SERPINA7P05543 415 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 SMIM10L2AP0DMW4 78 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 SMIM10L2BP0DMW5 78 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 COX4I1P13073 169 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 CPMP14384 443 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 ZNF25P17030 456 aaPredicted RBP1.19□□□□□ -2.22
LMNB1-207ENST00000494185 OGNP20774 298 aaKnown RBP1.19□□□□□ -2.22
LMNB1-207ENST00000494185 RPL35P42766 123 aaKnown RBP1.19□□□□□ -2.22
LMNB1-207ENST00000494185 CSN1S1P47710 185 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 SRP9P49458 86 aaKnown RBP1.19□□□□□ -2.22
LMNB1-207ENST00000494185 RPS20P60866 119 aaKnown RBP1.19□□□□□ -2.22
LMNB1-207ENST00000494185 C12orf74Q32Q52 190 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 IBA57Q5T440 356 aaKnown RBP1.19□□□□□ -2.22
LMNB1-207ENST00000494185 TRIQKQ629K1 86 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 HAGHLQ6PII5 290 aaPredicted RBP1.19□□□□□ -2.22
LMNB1-207ENST00000494185 SSX8Q7RTT4 187 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 GRINAQ7Z429 371 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 ANGPTL5Q86XS5 388 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 ST6GALNAC3Q8NDV1 305 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 OR10D4PQ8NGN7 298 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 OR4K15Q8NH41 348 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 ZNF675Q8TD23 568 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 GNPDA2Q8TDQ7 276 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 KLK6Q92876 244 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 TVP23CQ96ET8 276 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 ERMAPQ96PL5 475 aaPredicted RBP1.19□□□□□ -2.22
LMNB1-207ENST00000494185 PFDN5Q99471 154 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 ZNF471Q9BX82 626 aaPredicted RBP1.19□□□□□ -2.22
LMNB1-207ENST00000494185 RNASE7Q9H1E1 156 aaKnown RBP1.19□□□□□ -2.22
LMNB1-207ENST00000494185 MIXL1Q9H2W2 232 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 RNF122Q9H9V4 155 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 EFCAB1Q9HAE3 211 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 CISHQ9NSE2 258 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 UQCC1Q9NVA1 299 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 C14orf105Q9NVL8 296 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 FBXL12Q9NXK8 326 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 GSKIPQ9P0R6 139 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 OPTCQ9UBM4 332 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 MCTS1Q9ULC4 181 aaKnown RBP1.19□□□□□ -2.22
LMNB1-207ENST00000494185 PYCARDQ9ULZ3 195 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 HSPE1-MOB4S4R3N1 261 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 KDM5BQ9UGL1 1544 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 RTL1A6NKG5 1358 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 ROBO3Q96MS0 1386 aa1.19□□□□□ -2.22
LMNB1-207ENST00000494185 CAMSAP1Q5T5Y3 1602 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 NEO1Q92859 1461 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.18□□□□□ -2.22
LMNB1-207ENST00000494185 SOGA1O94964 1423 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 A0A087WX48 190 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 A0A0J9YW62 118 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 A0A1B0GV72 72 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 EXOC1LA0A1B0GW35 172 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 A0A1W2PNM2 257 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 A0A1W2PQD3 144 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 PRORSD1PA6NEY8 169 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 G3V3Q6 166 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 I3L521 148 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 PIRO00625 290 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 IGF2P01344 180 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 IFNA1P01562 189 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 IFNA10P01566 189 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 C1QBP02746 253 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 C1QCP02747 245 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 PRM2P04554 102 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 IFNA4P05014 189 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 C8GP07360 202 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 ZNF728P0DKX0 622 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 CCL5P13501 91 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 GPX2P18283 190 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 PPIBP23284 216 aaKnown RBP1.18□□□□□ -2.22
LMNB1-207ENST00000494185 PSMD8P48556 350 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 EIF2B2P49770 351 aaKnown RBP1.18□□□□□ -2.22
LMNB1-207ENST00000494185 RBP2P50120 134 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 TAS2R41P59536 307 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 CDC42P60953 191 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 HIST1H4AP62805 103 aaKnown RBP1.18□□□□□ -2.22
LMNB1-207ENST00000494185 HBA1P69905 142 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 RPL18Q07020 188 aaKnown RBP1.18□□□□□ -2.22
LMNB1-207ENST00000494185 PYDC2Q56P42 97 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 RPL22L1Q6P5R6 122 aaKnown RBP1.18□□□□□ -2.22
LMNB1-207ENST00000494185 SCIMPQ6UWF3 145 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 C2orf91Q6ZV80 131 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 SLC35F6Q8N357 371 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 SMIM20Q8N5G0 67 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 RNASE11Q8TAA1 199 aaKnown RBP1.18□□□□□ -2.22
LMNB1-207ENST00000494185 SLC7A6Q92536 515 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 TOMM6Q96B49 74 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 C2orf50Q96LR7 162 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 MIEN1Q9BRT3 115 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 CCDC90BQ9GZT6 254 aa1.18□□□□□ -2.22
LMNB1-207ENST00000494185 TPT1P8Q9HAU6 139 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms