RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 OR8B2Q96RD0 313 aa9.87□□□□□ -0.83
HDAC6-230ENST00000488543 MRPL20Q9BYC9 149 aaKnown RBP9.87□□□□□ -0.83
HDAC6-230ENST00000488543 AURKAIP1Q9NWT8 199 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-230ENST00000488543 NAV2Q8IVL1 2488 aa9.86□□□□□ -0.83
HDAC6-230ENST00000488543 TRAV3A0A0B4J244 114 aa9.86□□□□□ -0.83
HDAC6-230ENST00000488543 FABP4P15090 132 aa9.86□□□□□ -0.83
HDAC6-230ENST00000488543 LHX4Q969G2 390 aa9.86□□□□□ -0.83
HDAC6-230ENST00000488543 ST6GALNAC6Q969X2 333 aa9.86□□□□□ -0.83
HDAC6-230ENST00000488543 RHOVQ96L33 236 aa9.86□□□□□ -0.83
HDAC6-230ENST00000488543 TCEAL7Q9BRU2 100 aa9.86□□□□□ -0.83
HDAC6-230ENST00000488543 ELOVL1Q9BW60 279 aa9.86□□□□□ -0.83
HDAC6-230ENST00000488543 TNCP24821 2201 aa9.86□□□□□ -0.83
HDAC6-230ENST00000488543 CD81P60033 236 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 RELBQ01201 579 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 POU2AF1Q16633 256 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 TMEM41BQ5BJD5 291 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 TMEM14EPQ6UXP3 125 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 LY6G5BQ8NDX9 201 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 TMEM133Q9H2Q1 129 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 PATZ1Q9HBE1 687 aaKnown RBP9.85□□□□□ -0.83
HDAC6-230ENST00000488543 SDF2L1Q9HCN8 221 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 TMEM140Q9NV12 185 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 C22orf46C9J442 243 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 NDUFS6O75380 124 aaKnown RBP9.85□□□□□ -0.83
HDAC6-230ENST00000488543 RBMXL2O75526 392 aaKnown RBP9.85□□□□□ -0.83
HDAC6-230ENST00000488543 S100PP25815 95 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 S100A2P29034 98 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 ZNF137PP52743 207 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 ERVK-16P61578 105 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 HBG1P69891 147 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 HBG2P69892 147 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 DIAPH2-AS1Q14236 149 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 GCSAMLQ5JQS6 135 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 HIST3H2BBQ8N257 126 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 OR9G1Q8NH87 305 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 SMIM7Q9BQ49 75 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 SLC35D1Q9NTN3 355 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 GAR1Q9NY12 217 aaKnown RBP9.85□□□□□ -0.83
HDAC6-230ENST00000488543 HECTD1Q9ULT8 2610 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 ITPR2Q14571 2701 aa9.85□□□□□ -0.83
HDAC6-230ENST00000488543 TRAV1-1A0A0B4J248 108 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 ZFP36P26651 326 aaKnown RBP9.84□□□□□ -0.83
HDAC6-230ENST00000488543 PRSS8Q16651 343 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 FAM71F2Q6NXP2 309 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 WDR73Q6P4I2 378 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 C16orf82Q7Z2V1 217 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 ABHD12Q8N2K0 398 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 MBD3L1Q8WWY6 194 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 SLC39A9Q9NUM3 307 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 PPIAL4CA0A0B4J2A2 164 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 IGKV1-16P04430 117 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 IL6RP08887 468 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-230ENST00000488543 PPIAL4GP0DN37 164 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 FGF7P21781 194 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 GNB2P62879 340 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 PDLIM3Q53GG5 364 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-230ENST00000488543 OR4A47Q6IF82 309 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 DPPA3Q6W0C5 159 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 OR10X1Q8NGY0 326 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 DTD1Q8TEA8 209 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 NABP2Q9BQ15 211 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 PRO1933Q9H354 126 aa9.84□□□□□ -0.83
HDAC6-230ENST00000488543 SRRM4A7MD48 611 aaKnown RBP9.83□□□□□ -0.84
HDAC6-230ENST00000488543 PMS2P5A8MQ11 134 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 H0YJW9 148 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 SOX15O60248 233 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 RBP4P02753 201 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 REG1BP48304 166 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 OR5AN1Q8NGI8 311 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 OR13D1Q8NGV5 346 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 SIRT7Q9NRC8 400 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 VAX2Q9UIW0 290 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 ZFHX3Q15911 3703 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 CXorf65A6NEN9 183 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 CLDN34H7C241 214 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 PPP1R2P9O14990 202 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 RTL8BQ17RB0 113 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 FFAR4Q5NUL3 377 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 OR4F5Q8NH21 305 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 OR52E5Q8NH55 327 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 OR4A16Q8NH70 328 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 TMEM186Q96B77 213 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 OR4F4Q96R69 305 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 PFDN5Q99471 154 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 PSMG3Q9BT73 122 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-230ENST00000488543 SSBP3Q9BWW4 388 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-230ENST00000488543 ZANQ9Y493 2812 aa9.83□□□□□ -0.84
HDAC6-230ENST00000488543 IGHV2-26A0A0B4J1V2 119 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 C15orf61A6NNL5 157 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 IGLV1-47P01700 117 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 PDLIM4P50479 330 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 SPCS3P61009 180 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 LMO4P61968 165 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 GAMTQ14353 236 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 FAM168AQ92567 244 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 IGHV4-30-2A0A087WSY4 118 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 PGPEP1LA6NFU8 196 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 HRASP01112 189 aa9.82□□□□□ -0.84
HDAC6-230ENST00000488543 VDAC2P45880 294 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-230ENST00000488543 UBE2G2P60604 165 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms