RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 AMTP48728 403 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 S100A7AQ86SG5 101 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 OR8I2Q8N0Y5 310 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 Q8NFD4 153 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 ELOVL1Q9BW60 279 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 OR51M1Q9H341 326 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 H3BTX0 84 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 MYOD1P15172 320 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 RAB4AP20338 218 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 MMDQ15546 238 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 HILPDAQ9Y5L2 63 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 ARFGEF3Q5TH69 2177 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 TMEM8BA6NDV4 472 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 HIST1H2BKO60814 126 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 HIST1H2BJP06899 126 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 HIST1H2BOP23527 126 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 HIST1H2BBP33778 126 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 RPL27AP46776 148 aaKnown RBP9.64□□□□□ -0.87
NPHP4-204ENST00000460696 HIST1H2BDP58876 126 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 ERVK11-1P61568 191 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 HIST1H2BCP62807 126 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 HIST2H2BEQ16778 126 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.64□□□□□ -0.87
NPHP4-204ENST00000460696 OR1P1Q8NH06 330 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 RAB1CQ92928 201 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 HIST1H2BHQ93079 126 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 DIRC2Q96SL1 478 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 HIST1H2BNQ99877 126 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 HIST1H2BMQ99879 126 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 PAXXQ9BUH6 204 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 MRPL20Q9BYC9 149 aaKnown RBP9.64□□□□□ -0.87
NPHP4-204ENST00000460696 WDR83OSQ9Y284 106 aa9.64□□□□□ -0.87
NPHP4-204ENST00000460696 C5orf52A6NGY3 159 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 C17orf100A8MU93 164 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 SLC17A3O00476 420 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 CT45A10P0DMU9 189 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 RPL29P47914 159 aaKnown RBP9.63□□□□□ -0.87
NPHP4-204ENST00000460696 OR4C13Q8NGP0 309 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 SRD5A3Q9H8P0 318 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 MGAQ8IWI9 3026 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 GRIFINA4D1Z8 144 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 NPIPB11E5RHQ5 1161 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 KIAA1644Q3SXP7 199 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 GFI1BQ5VTD9 330 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 MBNL2Q5VZF2 373 aaKnown RBP9.63□□□□□ -0.87
NPHP4-204ENST00000460696 DOLPP1Q86YN1 238 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 TMEM106BQ9NUM4 274 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 WASHC3Q9Y3C0 194 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 SMAD7O15105 426 aaKnown RBP9.63□□□□□ -0.87
NPHP4-204ENST00000460696 HOXA5P20719 270 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 GAMTQ14353 236 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 SPRY4Q9C004 299 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 RAB1BQ9H0U4 201 aa9.63□□□□□ -0.87
NPHP4-204ENST00000460696 KRTAP27-1Q3LI81 207 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 C10orf91Q5T1B1 145 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 GSN-AS1Q9NRJ2 163 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 TRAV1-1A0A0B4J248 108 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 LINC00587B1AMM8 73 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 HSBP1L1C9JCN9 74 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 LYNX1G3V0Z9 82 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 LYNX1P0DP58 116 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 Q6ZPA2 131 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 MIR17HGQ75NE6 70 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 SFRP2Q96HF1 295 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.62□□□□□ -0.87
NPHP4-204ENST00000460696 C8orf88P0DMB2 117 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 USF1P22415 310 aaPredicted RBP9.62□□□□□ -0.87
NPHP4-204ENST00000460696 SRP14P37108 136 aaKnown RBP9.62□□□□□ -0.87
NPHP4-204ENST00000460696 GNB2P62879 340 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 Q56UQ5 140 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 TREML4Q6UXN2 200 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 OR8B3Q8NGG8 313 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 OR8B2Q96RD0 313 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 TXNDC17Q9BRA2 123 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 DNAJC4Q9NNZ3 241 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 ZNRD1Q9P1U0 126 aa9.62□□□□□ -0.87
NPHP4-204ENST00000460696 IGHV1-69-2A0A0G2JMI3 117 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 CBLN1P23435 193 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 CSN1S1P47710 185 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 ARF6P62330 175 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 FAM209BQ5JX69 171 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 OR9G1Q8NH87 305 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 A0A1B0GW64 132 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 C15orf61A6NNL5 157 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 UBE2CO00762 179 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 MOSP00540 346 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 SAA1P0DJI8 122 aaPredicted RBP9.61□□□□□ -0.87
NPHP4-204ENST00000460696 MFAP2P55001 183 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 OR5I1Q13606 314 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 RNF2Q99496 336 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 TNFRSF19Q9NS68 423 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 DCAF16Q9NXF7 216 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 FOLR2P14207 255 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 MC5RP33032 325 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 HLA-DRB5Q30154 266 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 FAM90A2PQ658T7 463 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 RNASEKQ6P5S7 137 aaKnown RBP9.61□□□□□ -0.87
NPHP4-204ENST00000460696 HAPLN4Q86UW8 402 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 OR10W1Q8NGF6 305 aa9.61□□□□□ -0.87
NPHP4-204ENST00000460696 DERL1Q9BUN8 251 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms