RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 LINC00322Q6ZN03 302 aaPredicted RBP-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 Q6ZS92 163 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 CLVS1Q8IUQ0 354 aaPredicted RBP-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 BOD1L2Q8IYS8 172 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 LINC00471Q8N535 108 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 UBL4BQ8N7F7 174 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 C3orf56Q8N813 242 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 PFN4Q8NHR9 129 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 HAVCR2Q8TDQ0 301 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 C11orf40Q8WZ69 217 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 KLK6Q92876 244 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 TMEM106AQ96A25 262 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 SMIM12Q96EX1 92 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 ZC2HC1AQ96GY0 325 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 TSPAN32Q96QS1 320 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 TIPINQ9BVW5 301 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 DCSTAMPQ9H295 470 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 SPACA1Q9HBV2 294 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 XAGE1AQ9HD64 81 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 ASCL3Q9NQ33 180 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 GPR84Q9NQS5 396 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 EURLQ9NYK6 297 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 TAS2R7Q9NYW3 318 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 IL36BQ9NZH7 164 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 PXMP4Q9Y6I8 212 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 HECW1Q76N89 1606 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 KIF15Q9NS87 1388 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 UBR5O95071 2799 aaPredicted RBP-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 LPAP08519 4548 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 MAP3K19Q56UN5 1328 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 TET1Q8NFU7 2136 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 ASCC3Q8N3C0 2202 aaKnown RBP-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 RIMS2Q9UQ26 1411 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 KIAA1549Q9HCM3 1950 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 FLNCQ14315 2725 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 WNK2Q9Y3S1 2297 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 TRBV6-4A0A1B0GX49 114 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 C5orf49A4QMS7 147 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 FABP5P3A8MUU1 101 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 KCNK1O00180 336 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 LIN7AO14910 233 aaPredicted RBP-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 CCL16O15467 120 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 ATP6V1G2O95670 118 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 SPINK1P00995 79 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 IGKV1-5P01602 117 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 HTR1AP08908 422 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 NFYAP23511 347 aaPredicted RBP-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 MAP2K4P45985 399 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 FOXA3P55318 350 aaPredicted RBP-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 MAP3K7CLP57077 242 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 QRFPP83859 136 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 ZNHIT3Q15649 155 aaPredicted RBP-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 IBA57Q5T440 356 aaKnown RBP-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 GLIPR1L1Q6UWM5 242 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 PHF13Q86YI8 300 aaPredicted RBP-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 PLPP5Q8NEB5 264 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 OR52R1Q8NGF1 315 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 OR4D11Q8NGI4 311 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 OR5A1Q8NGJ0 315 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 STOML3Q8TAV4 291 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 OPTNQ96CV9 577 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 ULBP3Q9BZM4 244 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 NDEL1Q9GZM8 345 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 DERL2Q9GZP9 239 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 METTL9Q9H1A3 318 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 MS4A6AQ9H2W1 248 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 PSTPIP2Q9H939 334 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 EFCAB1Q9HAE3 211 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 RASL12Q9NYN1 266 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 TAS2R4Q9NYW5 299 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 TMEM14CQ9P0S9 112 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 EPDR1Q9UM22 224 aa-0.37□□□□□ -2.47
SNHG3-203ENST00000447507 SPTBN4Q9H254 2564 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 HECTD4Q9Y4D8 3996 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 A0A0J9YY10 115 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 A0A1B0GW54 56 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 A0A1B0GX78 115 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 ACOX3O15254 700 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 SULT1B1O43704 296 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 LY6G6CO95867 125 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 PRM2P04554 102 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 SRP19P09132 144 aaKnown RBP-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 FGF6P10767 208 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 CXCR4P61073 352 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 GUK1Q16774 197 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 DNAL1Q4LDG9 190 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 Q5BKY6 102 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 RBM48Q5RL73 367 aaKnown RBP-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 AADACL3Q5VUY0 350 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 FAM45BPQ6NSW5 357 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 OR4E2Q8NGC2 313 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 OR52E4Q8NGH9 312 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 LRRC20Q8TCA0 184 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 RASSF5Q8WWW0 418 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 PLAC4Q8WY50 150 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 GINS4Q9BRT9 223 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 DERL1Q9BUN8 251 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 HES4Q9HCC6 221 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 RABL2AQ9UBK7 228 aaPredicted RBP-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 CKLFQ9UBR5 152 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms