RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 COLCA2A8K830 154 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 SAP30O75446 220 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 TMEM187Q14656 261 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 RBPMS2Q6ZRY4 209 aaKnown RBP6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 CBLN2Q8IUK8 224 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 MRPL30Q8TCC3 161 aaKnown RBP6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 RASL11BQ9BPW5 248 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 C1RLQ9NZP8 487 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 JPT1Q9UK76 154 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 IGKV1D-13A0A0B4J2D9 117 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 OR2C1O95371 312 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 SFTA3P0C7M3 94 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 IGKV1-13P0DP09 117 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 OR2T6Q8NHC8 308 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 BLNKQ8WV28 456 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 ZNF586Q9NXT0 402 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 DENND4AQ7Z401 1863 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 LOC105371242A0A075B767 164 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 DUXBA0A1W2PPF3 345 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 CSN1S1P47710 185 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 LYZP61626 148 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 ECSCRQ19T08 205 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 RTBDNQ9BSG5 229 aaPredicted RBP6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 THYN1Q9P016 225 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 C5orf42Q9H799 3197 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 LAMA3Q16787 3333 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 RBFOX2O43251 390 aaKnown RBP eCLIP6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 SNAI2O43623 268 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 DEDDO75618 318 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 IGHV1-46P01743 117 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 IGHV3-48P01763 117 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 GNLYP22749 145 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 HTR1DP28221 377 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 UCP3P55916 312 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 PAX5Q02548 391 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 OR9G1Q8NH87 305 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 GINS3Q9BRX5 216 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 ATG101Q9BSB4 218 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 TRAV26-1A0A087WT03 109 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 E9PQ18 207 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 F12P00748 615 aaPredicted RBP6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 ESDP10768 282 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 CEACAM8P31997 349 aaPredicted RBP6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 TMEM42Q69YG0 159 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 PERPQ96FX8 193 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 GNG7O60262 68 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 RPL27AP46776 148 aaKnown RBP6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 RHOBP62745 196 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 LCN2P80188 198 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 FAM166AQ6J272 317 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 WDR31Q8NA23 367 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 OR1B1Q8NGR6 318 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 RBKSQ9H477 322 aa6.79□□□□□ -1.32
TMEM39A-202ENST00000438581 ZNF785A8K8V0 405 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 C17orf98A8MV24 154 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 PSPNO60542 156 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 ZNF737O75373 536 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 OR2A4O95047 310 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 OR2A7Q96R45 310 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 TIMM9Q9Y5J7 89 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 IGKV3-7A0A075B6H7 116 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 ZNF503-AS2A6NEH8 195 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 CLDN34H7C241 214 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 SRSF10O75494 262 aaKnown RBP6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 TSPAN13O95857 204 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 LGALS7P47929 136 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 TCL1AP56279 114 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 RPL8P62917 257 aaKnown RBP6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 ZNF660Q6AZW8 331 aaPredicted RBP6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 FOXL2NBQ6ZUU3 175 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 OR4B1Q8NGF8 309 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 GALNT14Q96FL9 552 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 WASHC3Q9Y3C0 194 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 ZNF106Q9H2Y7 1883 aaKnown RBP6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 KIR2DL5BA0A0G2JN68 375 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 KIR2DL5BA0A0G2JPC4 375 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 CT45A10P0DMU9 189 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 ZNF345Q14585 488 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 ZNF429Q86V71 674 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 KIR2DL5AQ8N109 375 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 NEUROG1Q92886 237 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 CCL19Q99731 98 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 MEGF9Q9H1U4 602 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 MRPL16Q9NX20 251 aaKnown RBP6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 CEP192Q8TEP8 1941 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 DPRXA6NFQ7 191 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 MSGN1A6NI15 193 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 LY6HO94772 140 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 DVL1P1P54792 670 aaPredicted RBP6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 DHRS11Q6UWP2 260 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 HS3ST6Q96QI5 342 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 CABLES2Q9BTV7 478 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 CLEC7AQ9BXN2 247 aa6.78□□□□□ -1.32
TMEM39A-202ENST00000438581 PRRC2CQ9Y520 2896 aaKnown RBP6.77□□□□□ -1.32
TMEM39A-202ENST00000438581 KIAA1549LQ6ZVL6 1849 aa6.77□□□□□ -1.33
TMEM39A-202ENST00000438581 DKK1O94907 266 aa6.77□□□□□ -1.33
TMEM39A-202ENST00000438581 REG1AP05451 166 aa6.77□□□□□ -1.33
TMEM39A-202ENST00000438581 RPL29P47914 159 aaKnown RBP6.77□□□□□ -1.33
TMEM39A-202ENST00000438581 RSPO1Q2MKA7 263 aaPredicted RBP6.77□□□□□ -1.33
TMEM39A-202ENST00000438581 IGFL3Q6UXB1 125 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms