RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 MDFIQ99750 246 aa12.94□□□□□ -0.34
CTDSPL-204ENST00000435525 CGB1A6NKQ9 187 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 FAM223BA6NKX1 122 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 NUDT19A8MXV4 375 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 CCSO14618 274 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 NXPH3O95157 252 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 SCGB1D2O95969 90 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 REG1AP05451 166 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 CD28P10747 220 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 HTR2BP41595 481 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 ATP5IP56385 69 aaPredicted RBP12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 CD83Q01151 205 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 WT1-ASQ06250 92 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 FAM209BQ5JX69 171 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 SLC25A24Q6NUK1 477 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 NDUFA11Q86Y39 141 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 FAM223AQ8IWN6 122 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 RNF152Q8N8N0 203 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 C11orf44Q8N8P7 122 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 NECAP1Q8NC96 275 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 OR1P1Q8NH06 330 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 RBKSQ9H477 322 aa12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 F11RQ9Y624 299 aaKnown RBP12.93□□□□□ -0.34
CTDSPL-204ENST00000435525 A0A1B0GW64 132 aa12.92□□□□□ -0.34
CTDSPL-204ENST00000435525 CORTO00230 105 aa12.92□□□□□ -0.34
CTDSPL-204ENST00000435525 SYNGR2O43760 224 aa12.92□□□□□ -0.34
CTDSPL-204ENST00000435525 ATP5G2Q06055 141 aa12.92□□□□□ -0.34
CTDSPL-204ENST00000435525 C10orf99Q6UWK7 81 aa12.92□□□□□ -0.34
CTDSPL-204ENST00000435525 OR10C1Q96KK4 312 aa12.92□□□□□ -0.34
CTDSPL-204ENST00000435525 CITED1Q99966 193 aa12.92□□□□□ -0.34
CTDSPL-204ENST00000435525 MGAT4CQ9UBM8 478 aa12.92□□□□□ -0.34
CTDSPL-204ENST00000435525 U3KQ87 197 aa12.92□□□□□ -0.34
CTDSPL-204ENST00000435525 SOX15O60248 233 aa12.91□□□□□ -0.34
CTDSPL-204ENST00000435525 IFNA10P01566 189 aa12.91□□□□□ -0.34
CTDSPL-204ENST00000435525 RLN2P04090 185 aa12.91□□□□□ -0.34
CTDSPL-204ENST00000435525 RPLP1P05386 114 aaKnown RBP12.91□□□□□ -0.34
CTDSPL-204ENST00000435525 PVALBP20472 110 aaPredicted RBP12.91□□□□□ -0.34
CTDSPL-204ENST00000435525 RPL23AP62750 156 aaKnown RBP12.91□□□□□ -0.34
CTDSPL-204ENST00000435525 RHOGP84095 191 aa12.91□□□□□ -0.34
CTDSPL-204ENST00000435525 ID3Q02535 119 aa12.91□□□□□ -0.34
CTDSPL-204ENST00000435525 ZNF114Q8NC26 417 aa12.91□□□□□ -0.34
CTDSPL-204ENST00000435525 OR4D5Q8NGN0 318 aa12.91□□□□□ -0.34
CTDSPL-204ENST00000435525 SPATA3Q8NHX4 192 aa12.91□□□□□ -0.34
CTDSPL-204ENST00000435525 UBE2E2Q96LR5 201 aa12.91□□□□□ -0.34
CTDSPL-204ENST00000435525 CITED2Q99967 270 aaPredicted RBP12.91□□□□□ -0.34
CTDSPL-204ENST00000435525 FBXL7Q9UJT9 491 aa12.91□□□□□ -0.34
CTDSPL-204ENST00000435525 MPTX1A8MV57 137 aa12.9□□□□□ -0.34
CTDSPL-204ENST00000435525 L7N2F9 121 aa12.9□□□□□ -0.34
CTDSPL-204ENST00000435525 CDX1P47902 265 aaPredicted RBP12.9□□□□□ -0.34
CTDSPL-204ENST00000435525 RAB11AP62491 216 aa12.9□□□□□ -0.34
CTDSPL-204ENST00000435525 VAMP2P63027 116 aa12.9□□□□□ -0.34
CTDSPL-204ENST00000435525 SLC24A4Q8NFF2 622 aa12.9□□□□□ -0.34
CTDSPL-204ENST00000435525 CXorf58Q96LI9 332 aa12.9□□□□□ -0.34
CTDSPL-204ENST00000435525 RAB40CQ96S21 281 aa12.9□□□□□ -0.34
CTDSPL-204ENST00000435525 P2RX4Q99571 388 aa12.9□□□□□ -0.34
CTDSPL-204ENST00000435525 MAGT1Q9H0U3 335 aa12.9□□□□□ -0.34
CTDSPL-204ENST00000435525 KLK15Q9H2R5 256 aa12.9□□□□□ -0.34
CTDSPL-204ENST00000435525 M0QZ24 198 aa12.89□□□□□ -0.35
CTDSPL-204ENST00000435525 OR2J3O76001 311 aa12.89□□□□□ -0.35
CTDSPL-204ENST00000435525 PRH1P02810 166 aa12.89□□□□□ -0.35
CTDSPL-204ENST00000435525 PET100P0DJ07 73 aa12.89□□□□□ -0.35
CTDSPL-204ENST00000435525 NPY1RP25929 384 aa12.89□□□□□ -0.35
CTDSPL-204ENST00000435525 S100A10P60903 97 aa12.89□□□□□ -0.35
CTDSPL-204ENST00000435525 EXOSC2Q13868 293 aaKnown RBP12.89□□□□□ -0.35
CTDSPL-204ENST00000435525 C2orf68Q2NKX9 166 aa12.89□□□□□ -0.35
CTDSPL-204ENST00000435525 NSUN5P1Q3KNT7 163 aa12.89□□□□□ -0.35
CTDSPL-204ENST00000435525 ZNF491Q8N8L2 437 aa12.89□□□□□ -0.35
CTDSPL-204ENST00000435525 KLHL30-AS1Q8NEE0 82 aa12.89□□□□□ -0.35
CTDSPL-204ENST00000435525 ASB13Q8WXK3 278 aa12.89□□□□□ -0.35
CTDSPL-204ENST00000435525 EEF1AKMT3Q96AZ1 226 aa12.89□□□□□ -0.35
CTDSPL-204ENST00000435525 MISP3Q96FF7 219 aa12.89□□□□□ -0.35
CTDSPL-204ENST00000435525 NMES1Q9C002 83 aa12.89□□□□□ -0.35
CTDSPL-204ENST00000435525 ZFHX3Q15911 3703 aa12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 IGLV11-55A0A075B6I3 123 aa12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 TRBV9A0A0B4J1U6 114 aa12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 RPS10-NUDT3A0A1W2PQS6 291 aa12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 A0A1W2PRX2 142 aa12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 SSSCA1O60232 199 aa12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 SCGB2A1O75556 95 aa12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 IAPPP10997 89 aa12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 RRAS2P62070 204 aaPredicted RBP12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 POLR2GP62487 172 aaKnown RBP eCLIP12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 C2orf83Q53S99 150 aa12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 TCTEX1D4Q5JR98 221 aa12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 LCNL1Q6ZST4 164 aa12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 OR4F17Q8NGA8 305 aa12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 MYOZ3Q8TDC0 251 aa12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 C4orf3Q8WVX3 66 aa12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 OR4F4Q96R69 305 aa12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 GAR1Q9NY12 217 aaKnown RBP12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 PAIP2BQ9ULR5 123 aaKnown RBP12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 STRAPQ9Y3F4 350 aaKnown RBP12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 LSM5Q9Y4Y9 91 aaKnown RBP12.88□□□□□ -0.35
CTDSPL-204ENST00000435525 TRBV7-1A0A0A6YYK4 115 aa12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 SIX6O95475 246 aa12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 MBPP02686 304 aaPredicted RBP12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 IFNA4P05014 189 aa12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 OR8U8P0C7N1 319 aa12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 RNASE2P10153 161 aaKnown RBP12.87□□□□□ -0.35
CTDSPL-204ENST00000435525 TAS2R30P59541 319 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms