RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 PDZD11Q5EBL8 140 aa15.13■□□□□ 0.01
CLK1-205ENST00000434813 FAM71F2Q6NXP2 309 aa15.13■□□□□ 0.01
CLK1-205ENST00000434813 OR10D4PQ8NGN7 298 aa15.13■□□□□ 0.01
CLK1-205ENST00000434813 OR1L8Q8NGR8 309 aa15.13■□□□□ 0.01
CLK1-205ENST00000434813 HARBI1Q96MB7 349 aa15.13■□□□□ 0.01
CLK1-205ENST00000434813 CHODLQ9H9P2 273 aa15.13■□□□□ 0.01
CLK1-205ENST00000434813 SLC45A2Q9UMX9 530 aa15.13■□□□□ 0.01
CLK1-205ENST00000434813 YLPM1P49750 1951 aaKnown RBP15.12■□□□□ 0.01
CLK1-205ENST00000434813 TRBV20OR9-2A0A075B6H5 130 aa15.12■□□□□ 0.01
CLK1-205ENST00000434813 TNFRSF13BO14836 293 aaPredicted RBP15.12■□□□□ 0.01
CLK1-205ENST00000434813 CHRNA7P36544 502 aa15.12■□□□□ 0.01
CLK1-205ENST00000434813 TMEM177Q53S58 311 aa15.12■□□□□ 0.01
CLK1-205ENST00000434813 C8orf31Q8N9H6 132 aa15.12■□□□□ 0.01
CLK1-205ENST00000434813 ZNF114Q8NC26 417 aa15.12■□□□□ 0.01
CLK1-205ENST00000434813 OR5T1Q8NG75 326 aa15.12■□□□□ 0.01
CLK1-205ENST00000434813 IMMP2LQ96T52 175 aa15.12■□□□□ 0.01
CLK1-205ENST00000434813 TMEM106BQ9NUM4 274 aa15.12■□□□□ 0.01
CLK1-205ENST00000434813 ARL2-SNX15V9GYD0 113 aa15.12■□□□□ 0.01
CLK1-205ENST00000434813 TLN1Q9Y490 2541 aaKnown RBP15.12■□□□□ 0.01
CLK1-205ENST00000434813 VSTM5A8MXK1 200 aa15.12■□□□□ 0.01
CLK1-205ENST00000434813 IGHV2-70P01814 119 aa15.12■□□□□ 0.01
CLK1-205ENST00000434813 ACTL10Q5JWF8 245 aa15.12■□□□□ 0.01
CLK1-205ENST00000434813 TMEM183AQ8IXX5 376 aa15.12■□□□□ 0.01
CLK1-205ENST00000434813 ZNF596Q8TC21 504 aa15.12■□□□□ 0.01
CLK1-205ENST00000434813 C11orf52Q96A22 123 aa15.12■□□□□ 0.01
CLK1-205ENST00000434813 ZGRF1Q86YA3 2104 aa15.11■□□□□ 0.01
CLK1-205ENST00000434813 NDUFB3O43676 98 aa15.11■□□□□ 0.01
CLK1-205ENST00000434813 RNASE2P10153 161 aaKnown RBP15.11■□□□□ 0.01
CLK1-205ENST00000434813 LRRC10Q5BKY1 277 aa15.11■□□□□ 0.01
CLK1-205ENST00000434813 COA6Q5JTJ3 125 aaKnown RBP15.11■□□□□ 0.01
CLK1-205ENST00000434813 RNASE6Q93091 150 aaKnown RBP15.11■□□□□ 0.01
CLK1-205ENST00000434813 BTF3L4Q96K17 158 aa15.11■□□□□ 0.01
CLK1-205ENST00000434813 SLC35E1Q96K37 410 aa15.11■□□□□ 0.01
CLK1-205ENST00000434813 VKORC1Q9BQB6 163 aa15.11■□□□□ 0.01
CLK1-205ENST00000434813 INS-IGF2F8WCM5 200 aa15.1■□□□□ 0.01
CLK1-205ENST00000434813 LINC00311Q8N616 119 aa15.1■□□□□ 0.01
CLK1-205ENST00000434813 CCL17Q92583 94 aa15.1■□□□□ 0.01
CLK1-205ENST00000434813 SFRP2Q96HF1 295 aa15.1■□□□□ 0.01
CLK1-205ENST00000434813 FUT9Q9Y231 359 aa15.1■□□□□ 0.01
CLK1-205ENST00000434813 ZZEF1O43149 2961 aa15.1■□□□□ 0.01
CLK1-205ENST00000434813 IGKV1OR2-108A0A075B7D4 117 aa15.1■□□□□ 0.01
CLK1-205ENST00000434813 FABP4P15090 132 aa15.1■□□□□ 0.01
CLK1-205ENST00000434813 RPL8P62917 257 aaKnown RBP15.1■□□□□ 0.01
CLK1-205ENST00000434813 CLEC12BQ2HXU8 276 aa15.1■□□□□ 0.01
CLK1-205ENST00000434813 FAM78BQ5VT40 261 aa15.1■□□□□ 0.01
CLK1-205ENST00000434813 OR4P4Q8NGL7 312 aa15.1■□□□□ 0.01
CLK1-205ENST00000434813 H1FXQ92522 213 aaKnown RBP15.1■□□□□ 0.01
CLK1-205ENST00000434813 NGBQ9NPG2 151 aa15.1■□□□□ 0.01
CLK1-205ENST00000434813 NDUFA4L2Q9NRX3 87 aa15.1■□□□□ 0.01
CLK1-205ENST00000434813 AURKAIP1Q9NWT8 199 aaPredicted RBP15.1■□□□□ 0.01
CLK1-205ENST00000434813 DMRT1Q9Y5R6 373 aa15.1■□□□□ 0.01
CLK1-205ENST00000434813 MDFIC2A0A1B0GVS7 189 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 PGPEP1LA6NFU8 196 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 FOXH1O75593 365 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 CD69Q07108 199 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 GAMTQ14353 236 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 DNLZQ5SXM8 178 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 LYPD2Q6UXB3 125 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 MIR17HGQ75NE6 70 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 MOB3BQ86TA1 216 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 PDPNQ86YL7 162 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 PNKDQ8N490 385 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 OR4A5Q8NH83 315 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 TMEM186Q96B77 213 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 FLYWCH2Q96CP2 140 aaKnown RBP15.09■□□□□ 0.01
CLK1-205ENST00000434813 ACY3Q96HD9 319 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 WFIKKN1Q96NZ8 548 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 HIST1H2BLQ99880 126 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 NABP2Q9BQ15 211 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 COMMD5Q9GZQ3 224 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 CTSZQ9UBR2 303 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 SHISA9B4DS77 424 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 AREGP15514 252 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 USF1P22415 310 aaPredicted RBP15.09■□□□□ 0.01
CLK1-205ENST00000434813 IL3RAP26951 378 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 CHRNB4P30926 498 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 FOXL1Q12952 345 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 DMRTC2Q8IXT2 367 aaPredicted RBP15.09■□□□□ 0.01
CLK1-205ENST00000434813 OR4C13Q8NGP0 309 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 OR10X1Q8NGY0 326 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 OR1P1Q8NH06 330 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 VSTM2AQ8TAG5 236 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 TMEM167AQ8TBQ9 72 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 UHRF2Q96PU4 802 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 DYNLRB1Q9NP97 96 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 KAAG1Q9UBP8 84 aa15.09■□□□□ 0.01
CLK1-205ENST00000434813 LOXP28300 417 aaPredicted RBP15.08■□□□□ 0
CLK1-205ENST00000434813 REG1BP48304 166 aa15.08■□□□□ 0
CLK1-205ENST00000434813 ZNF137PP52743 207 aa15.08■□□□□ 0
CLK1-205ENST00000434813 OR10W1Q8NGF6 305 aa15.08■□□□□ 0
CLK1-205ENST00000434813 PACRGQ96M98 296 aaPredicted RBP15.08■□□□□ 0
CLK1-205ENST00000434813 C19orf24Q9BVV8 132 aa15.08■□□□□ 0
CLK1-205ENST00000434813 A0A087X0M5 115 aa15.07■□□□□ 0
CLK1-205ENST00000434813 A0A1B0GX30 115 aa15.07■□□□□ 0
CLK1-205ENST00000434813 C9JCJ5 164 aa15.07■□□□□ 0
CLK1-205ENST00000434813 DVL1O14640 695 aa15.07■□□□□ 0
CLK1-205ENST00000434813 ACTL6BO94805 426 aa15.07■□□□□ 0
CLK1-205ENST00000434813 OR10J1P30954 320 aa15.07■□□□□ 0
CLK1-205ENST00000434813 DLX6P56179 175 aa15.07■□□□□ 0
CLK1-205ENST00000434813 CACNG8Q8WXS5 425 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms