RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 C12orf4Q9NQ89 552 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 AK3Q9UIJ7 227 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 RABL2BQ9UNT1 228 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 MRPS16Q9Y3D3 137 aaKnown RBP4.35□□□□□ -1.71
SDCBP-203ENST00000424270 TNFRSF18Q9Y5U5 241 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 A0A0J9YY99 117 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 A0A1W2PPK0 400 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 TCRBV5S2A0A599 114 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 ZAR1LA6NP61 321 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 LYRM9A8MSI8 78 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 TRDCB7Z8K6 153 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 E9PI62 339 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 SIVA1O15304 175 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 TMEM127O75204 238 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 HRASP01112 189 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 CTSGP08311 255 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 CD36P16671 472 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 SRMP19623 302 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 NPPCP23582 126 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 ZNF880Q6PDB4 577 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 PQLC1Q8N2U9 271 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 GDPD1Q8N9F7 314 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 CLRN3Q8NCR9 226 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 OR4B1Q8NGF8 309 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 SLC25A46Q96AG3 418 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 MISP3Q96FF7 219 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 OR10C1Q96KK4 312 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 TMEM59Q9BXS4 323 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 DPH3P1Q9H4G8 78 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 FAM30AQ9NZY2 134 aa4.34□□□□□ -1.71
SDCBP-203ENST00000424270 TRAV9-2A0A087WT02 112 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 TRAV26-1A0A087WT03 109 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 TRAV3A0A0B4J244 114 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 IGKV1-6A0A0C4DH72 117 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 A0A0U1RQV1 116 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 IGLC7A0M8Q6 106 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 SNTNA6NMZ2 147 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 FABP7O15540 132 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 P2RY1P47900 373 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 HOXA1P49639 335 aaPredicted RBP4.33□□□□□ -1.72
SDCBP-203ENST00000424270 DAPP51397 102 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 GTF2A1P52655 376 aaPredicted RBP4.33□□□□□ -1.72
SDCBP-203ENST00000424270 MFAP4P55083 255 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 TAS2R43P59537 309 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 ESRGQ1W209 222 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 IGSF11Q5DX21 431 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 OR10K2Q6IF99 312 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 TOMM20LQ6UXN7 152 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 CMTM1Q8IZ96 169 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 SYS1Q8N2H4 156 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 OR10W1Q8NGF6 305 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 OR4A4PQ8NGN8 299 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 NTN5Q8WTR8 489 aaPredicted RBP4.33□□□□□ -1.72
SDCBP-203ENST00000424270 C5orf30Q96GV9 206 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 METTL26Q96S19 204 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 ATP6V0BQ99437 205 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 CMSS1Q9BQ75 279 aaKnown RBP4.33□□□□□ -1.72
SDCBP-203ENST00000424270 AIFM2Q9BRQ8 373 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 UPK3BQ9BT76 320 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 QTRT1Q9BXR0 403 aaKnown RBP4.33□□□□□ -1.72
SDCBP-203ENST00000424270 VSIRQ9H7M9 311 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 SPATA2Q9UM82 520 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 LRP2P98164 4655 aa4.33□□□□□ -1.72
SDCBP-203ENST00000424270 TRAV8-7A0A075B6U6 113 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 CBY3A6NI87 242 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 H3BMM0 161 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 IGHV3-48P01763 117 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 SERPINE2P07093 398 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 TRAPPC2P0DI81 140 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 TRAPPC2BP0DI82 140 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 IGFBP3P17936 291 aaPredicted RBP4.32□□□□□ -1.72
SDCBP-203ENST00000424270 RAB6AP20340 208 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 HTR2CP28335 458 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 PRDX6P30041 224 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 SCAND1P57086 179 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 EFNB1P98172 346 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 ST3GAL4Q11206 333 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 FCN2Q15485 313 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 KLK9Q2XQG4 91 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 CGB2Q6NT52 195 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 ZNF773Q6PK81 442 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 PUSL1Q8N0Z8 303 aaKnown RBP4.32□□□□□ -1.72
SDCBP-203ENST00000424270 DMBX1Q8NFW5 382 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 PINX1Q96BK5 328 aaKnown RBP4.32□□□□□ -1.72
SDCBP-203ENST00000424270 CCDC124Q96CT7 223 aaKnown RBP4.32□□□□□ -1.72
SDCBP-203ENST00000424270 NXF2Q9GZY0 626 aaKnown RBP4.32□□□□□ -1.72
SDCBP-203ENST00000424270 KLK9Q9UKQ9 250 aa4.32□□□□□ -1.72
SDCBP-203ENST00000424270 LRP1Q07954 4544 aaKnown RBP4.32□□□□□ -1.72
SDCBP-203ENST00000424270 TRBV6-6A0A0A6YYG2 114 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 DBX1A6NMT0 343 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 ZNF705GA8MUZ8 300 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-203ENST00000424270 UBBP0CG47 229 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 HLA-DRB4P13762 266 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 HTN1P15515 57 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 CELP19835 753 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 M6PRP20645 277 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 AP2S1P53680 142 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-203ENST00000424270 KCTD21Q4G0X4 260 aa4.31□□□□□ -1.72
SDCBP-203ENST00000424270 RPL22L1Q6P5R6 122 aaKnown RBP4.31□□□□□ -1.72
SDCBP-203ENST00000424270 HSD17B13Q7Z5P4 300 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms