RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MAGT1Q9H0U3 335 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 TMEM133Q9H2Q1 129 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 LINC00574Q9H8X3 128 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 ENY2Q9NPA8 101 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 FBXL17Q9UF56 701 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 NUP50Q9UKX7 468 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 U3KQ87 197 aa3.03□□□□□ -1.92
HMGB3P20-201ENST00000417997 CELSR3Q9NYQ7 3312 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 LOC105371242A0A075B767 164 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGHV2-26A0A0B4J1V2 119 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 FAM24AA6NFZ4 105 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 H3BP45 60 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 J3QKU1 62 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 M0R1W7 72 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 NDUFS8O00217 210 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 SYNGR2O43760 224 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 ATP6V1G1O75348 118 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 PITX3O75364 302 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 FCN3O75636 299 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 DFFBO76075 338 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 TSHBP01222 138 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 IFNA17P01571 189 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGKV1-39P01597 117 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGHV2-5P01817 119 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGKV1D-39P04432 117 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 ARG1P05089 322 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 CLEC3BP05452 202 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 CEACAM3P40198 252 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 REG1BP48304 166 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 ARHGDIBP52566 201 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 DLX6P56179 175 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 LCN2P80188 198 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 EWSR1Q01844 656 aaKnown RBP eCLIP3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 BAXQ07812 192 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 TMEM267Q0VDI3 215 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 EIF4EBP1Q13541 118 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 ZNF266Q14584 549 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 HLA-DRB5Q30154 266 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 VMA21Q3ZAQ7 101 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 GPR157Q5UAW9 335 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 EIF5AL1Q6IS14 154 aaKnown RBP3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 ALKAL2Q6UX46 152 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 ZNF841Q6ZN19 808 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 ZNF833PQ6ZTB9 187 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 MOB3BQ86TA1 216 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 PDPNQ86YL7 162 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 PNKDQ8N490 385 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 LINC00311Q8N616 119 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 KIR3DL3Q8N743 410 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 C8orf31Q8N9H6 132 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 ZNF383Q8NA42 475 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 TMEM116Q8NCL8 245 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 ZNF680Q8NEM1 530 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR1S2Q8NGQ3 325 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 CLDND2Q8NHS1 167 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 VSTM2AQ8TAG5 236 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 CIB3Q96Q77 187 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 NABP2Q9BQ15 211 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 AGMATQ9BSE5 352 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 MRPL20Q9BYC9 149 aaKnown RBP3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 RBKSQ9H477 322 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 HEXA-AS1Q9H8Q6 139 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 SIRT7Q9NRC8 400 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 COA4Q9NYJ1 87 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 PSENENQ9NZ42 101 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 ZNRD1Q9P1U0 126 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 CACFD1Q9UGQ2 172 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 WASHC3Q9Y3C0 194 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 COL6A6A6NMZ7 2263 aa3.02□□□□□ -1.93
HMGB3P20-201ENST00000417997 CADP27708 2225 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 DIDO1Q9BTC0 2240 aaKnown RBP3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 MGAQ8IWI9 3026 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGHV2-70DA0A0C4DH43 119 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 A0A1W2PRD5 423 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 A0A1W2PRF3 423 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 A0A1W2PRM7 423 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGSF23A1L1A6 192 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 C15orf61A6NNL5 157 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 A8MXK9 166 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 LEUTXA8MZ59 168 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 H0YJW9 148 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 CHST1O43916 411 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 CRLF1O75462 422 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 CST7O76096 145 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 CFDP00746 253 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 IFNA5P01569 189 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 GAPDHP04406 335 aaKnown RBP3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR8U8P0C7N1 319 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR9G9P0C7N8 305 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGHV4-38-2P0DP08 117 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 SLC25A16P16260 332 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 HTR1DP28221 377 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 MC5RP33032 325 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 DYNLT3P51808 116 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 ZNF137PP52743 207 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 TAS2R30P59541 319 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 SPCS3P61009 180 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 ARF6P62330 175 aa3.01□□□□□ -1.93
HMGB3P20-201ENST00000417997 HBG1P69891 147 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms