RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 NDUFB8O95169 186 aa11.31□□□□□ -0.6
CHD1-202ENST00000414220 SNCAP37840 140 aa11.31□□□□□ -0.6
CHD1-202ENST00000414220 SUB1P53999 127 aaKnown RBP eCLIP11.31□□□□□ -0.6
CHD1-202ENST00000414220 KLF5Q13887 457 aaPredicted RBP11.31□□□□□ -0.6
CHD1-202ENST00000414220 RBMS2Q15434 407 aaKnown RBP11.31□□□□□ -0.6
CHD1-202ENST00000414220 TMEM268Q5VZI3 342 aa11.31□□□□□ -0.6
CHD1-202ENST00000414220 ACSM6Q6P461 480 aa11.31□□□□□ -0.6
CHD1-202ENST00000414220 TMED4Q7Z7H5 227 aa11.31□□□□□ -0.6
CHD1-202ENST00000414220 VN1R17PQ8TDU5 208 aa11.31□□□□□ -0.6
CHD1-202ENST00000414220 GLYATL2Q8WU03 294 aa11.31□□□□□ -0.6
CHD1-202ENST00000414220 C7orf50Q9BRJ6 194 aaKnown RBP11.31□□□□□ -0.6
CHD1-202ENST00000414220 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.31□□□□□ -0.6
CHD1-202ENST00000414220 AURKAIP1Q9NWT8 199 aaPredicted RBP11.31□□□□□ -0.6
CHD1-202ENST00000414220 F11RQ9Y624 299 aaKnown RBP11.31□□□□□ -0.6
CHD1-202ENST00000414220 IGKV1-5P01602 117 aa11.3□□□□□ -0.6
CHD1-202ENST00000414220 PRB2P02812 416 aaPredicted RBP11.3□□□□□ -0.6
CHD1-202ENST00000414220 ARL3P36405 182 aa11.3□□□□□ -0.6
CHD1-202ENST00000414220 SYNJ2BPP57105 145 aa11.3□□□□□ -0.6
CHD1-202ENST00000414220 WT1-ASQ06250 92 aa11.3□□□□□ -0.6
CHD1-202ENST00000414220 CNPY1Q3B7I2 92 aa11.3□□□□□ -0.6
CHD1-202ENST00000414220 FAM106AQ4KMX7 169 aa11.3□□□□□ -0.6
CHD1-202ENST00000414220 TMEM128Q5BJH2 165 aa11.3□□□□□ -0.6
CHD1-202ENST00000414220 CLEC19AQ6UXS0 136 aa11.3□□□□□ -0.6
CHD1-202ENST00000414220 LGI3Q8N145 548 aa11.3□□□□□ -0.6
CHD1-202ENST00000414220 OR9G4Q8NGQ1 327 aa11.3□□□□□ -0.6
CHD1-202ENST00000414220 OR1P1Q8NH06 330 aa11.3□□□□□ -0.6
CHD1-202ENST00000414220 GAR1Q9NY12 217 aaKnown RBP11.3□□□□□ -0.6
CHD1-202ENST00000414220 TMEM56-RWDD3S4R434 201 aa11.3□□□□□ -0.6
CHD1-202ENST00000414220 HOXA1P49639 335 aaPredicted RBP11.29□□□□□ -0.6
CHD1-202ENST00000414220 BAK1Q16611 211 aa11.29□□□□□ -0.6
CHD1-202ENST00000414220 DEFB121Q5J5C9 76 aa11.29□□□□□ -0.6
CHD1-202ENST00000414220 C19orf35Q6ZS72 473 aa11.29□□□□□ -0.6
CHD1-202ENST00000414220 SELENOHQ8IZQ5 122 aaKnown RBP11.29□□□□□ -0.6
CHD1-202ENST00000414220 OR2C3Q8N628 320 aa11.29□□□□□ -0.6
CHD1-202ENST00000414220 S100ZQ8WXG8 99 aa11.29□□□□□ -0.6
CHD1-202ENST00000414220 ATP6V0BQ99437 205 aa11.29□□□□□ -0.6
CHD1-202ENST00000414220 BATF3Q9NR55 127 aa11.29□□□□□ -0.6
CHD1-202ENST00000414220 A0A0B4J293 547 aa11.28□□□□□ -0.6
CHD1-202ENST00000414220 DBX1A6NMT0 343 aa11.28□□□□□ -0.6
CHD1-202ENST00000414220 ST8SIA3O43173 380 aa11.28□□□□□ -0.6
CHD1-202ENST00000414220 LY86O95711 162 aa11.28□□□□□ -0.6
CHD1-202ENST00000414220 IGHV3-23P01764 117 aa11.28□□□□□ -0.6
CHD1-202ENST00000414220 CLEC3BP05452 202 aa11.28□□□□□ -0.6
CHD1-202ENST00000414220 TMEM187Q14656 261 aa11.28□□□□□ -0.6
CHD1-202ENST00000414220 PLET1Q6UQ28 207 aa11.28□□□□□ -0.6
CHD1-202ENST00000414220 CENPSQ8N2Z9 138 aa11.28□□□□□ -0.6
CHD1-202ENST00000414220 OR52E5Q8NH55 327 aa11.28□□□□□ -0.6
CHD1-202ENST00000414220 TMEM230Q96A57 120 aa11.28□□□□□ -0.6
CHD1-202ENST00000414220 ZNF256Q9Y2P7 627 aaPredicted RBP11.28□□□□□ -0.6
CHD1-202ENST00000414220 A0A0B4J2A0 478 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 LINC00854A0A1B0GVQ3 168 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 DUXBA0A1W2PPF3 345 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 CORTO00230 105 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 BMPR1BO00238 502 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 TRBV12-3P01733 135 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 P0C879 139 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 SULT1A3P0DMM9 295 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 SULT1A4P0DMN0 295 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 VAMP1P23763 118 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 KRTAP10-11P60412 298 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 SPCS3P61009 180 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 UBE2MP61081 183 aaKnown RBP11.27□□□□□ -0.61
CHD1-202ENST00000414220 IZUMO4Q1ZYL8 232 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 GPHB5Q86YW7 130 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 ZNF114Q8NC26 417 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 ZNF502Q8TBZ5 544 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 MISP3Q96FF7 219 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 PALMDQ9NP74 551 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 C21orf62Q9NYP8 219 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 SHPKQ9UHJ6 478 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 S4R3C0 116 aa11.27□□□□□ -0.61
CHD1-202ENST00000414220 MFSD2BA6NFX1 497 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 A6NHS1 94 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 PPP5D1E7EU14 171 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 INS-IGF2F8WCM5 200 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 OR2C1O95371 312 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 IL7P13232 177 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 CCR6P51684 374 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 Q56UQ5 140 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 SPSB3Q6PJ21 355 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 NOXA1Q86UR1 476 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 GPR146Q96CH1 333 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 BSCL2Q96G97 398 aaPredicted RBP11.26□□□□□ -0.61
CHD1-202ENST00000414220 CCDC140Q96MF4 163 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 CCDC32Q9BV29 185 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 HIPK2Q9H2X6 1198 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 SIGLEC8Q9NYZ4 499 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 CACNG5Q9UF02 275 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 NOTCH1P46531 2555 aa11.26□□□□□ -0.61
CHD1-202ENST00000414220 CMYA5Q8N3K9 4069 aa11.25□□□□□ -0.61
CHD1-202ENST00000414220 ZNF320A2RRD8 509 aa11.25□□□□□ -0.61
CHD1-202ENST00000414220 CEBPZOSA8MTT3 80 aa11.25□□□□□ -0.61
CHD1-202ENST00000414220 LGALS9O00182 355 aa11.25□□□□□ -0.61
CHD1-202ENST00000414220 TGOLN2O43493 480 aa11.25□□□□□ -0.61
CHD1-202ENST00000414220 SCGB2A1O75556 95 aa11.25□□□□□ -0.61
CHD1-202ENST00000414220 GPR183P32249 361 aa11.25□□□□□ -0.61
CHD1-202ENST00000414220 MFAP4P55083 255 aa11.25□□□□□ -0.61
CHD1-202ENST00000414220 UBAC2Q8NBM4 344 aa11.25□□□□□ -0.61
CHD1-202ENST00000414220 LHFPL5Q8TAF8 219 aa11.25□□□□□ -0.61
CHD1-202ENST00000414220 SCARB1Q8WTV0 552 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms