RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 MT-CO2P00403 227 aa14.15□□□□□ -0.14
PTPRA-205ENST00000399903 FOXA3P55318 350 aaPredicted RBP14.15□□□□□ -0.14
PTPRA-205ENST00000399903 OR2D3Q8NGH3 330 aa14.15□□□□□ -0.14
PTPRA-205ENST00000399903 NEUROG1Q92886 237 aa14.15□□□□□ -0.14
PTPRA-205ENST00000399903 SGK494Q96LW2 274 aa14.15□□□□□ -0.14
PTPRA-205ENST00000399903 NAA38Q9BRA0 125 aaKnown RBP14.15□□□□□ -0.14
PTPRA-205ENST00000399903 AKAP13Q12802 2813 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 CYC1P08574 325 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 UBE2G1P62253 170 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 CX3CL1P78423 397 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 OR10J3Q5JRS4 329 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 Q8NFD4 153 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 SPSB4Q96A44 273 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 SF3B5Q9BWJ5 86 aaKnown RBP14.14□□□□□ -0.15
PTPRA-205ENST00000399903 TTTY12Q9BZ98 90 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 MT-ND6P03923 174 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 AMY1AP04745 511 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 EDDM3AQ14507 147 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 TRAT1Q6PIZ9 186 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 C19orf35Q6ZS72 473 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 TMEM251Q8N6I4 163 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 BOKQ9UMX3 212 aaPredicted RBP14.14□□□□□ -0.15
PTPRA-205ENST00000399903 TNCP24821 2201 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 DMXL2Q8TDJ6 3036 aa14.14□□□□□ -0.15
PTPRA-205ENST00000399903 SPAARA0A1B0GVQ0 90 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 FAM181BA6NEQ2 426 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 C12orf77C9JDV5 145 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 SSTR5P35346 364 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 EFNB3Q15768 340 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 Q8N7P7 452 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 STPG3Q8N7X2 389 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 FAM168AQ92567 244 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 LINC00479Q96M42 142 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 SPRY4Q9C004 299 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 ZNF355PQ9NSJ1 428 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 ATMQ13315 3056 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 ROS1P08922 2347 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 SAP30O75446 220 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 HBZP02008 142 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 APOA2P02652 100 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 RHOBP62745 196 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 GABRA6Q16445 453 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 CLEC2AQ6UVW9 174 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 C18orf32Q8TCD1 76 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 GSX1Q9H4S2 264 aaPredicted RBP14.13□□□□□ -0.15
PTPRA-205ENST00000399903 MUC6Q6W4X9 2439 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 SMG1Q96Q15 3661 aaKnown RBP14.13□□□□□ -0.15
PTPRA-205ENST00000399903 OR4C46A6NHA9 309 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 KCNE4Q8WWG9 221 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 DCTN5Q9BTE1 182 aa14.13□□□□□ -0.15
PTPRA-205ENST00000399903 OR5B21A6NL26 309 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 WNT9BO14905 357 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 HLA-DQA1P01909 254 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 NPY1RP25929 384 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 UQCRFS1P47985 274 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 ZNF718Q3SXZ3 478 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 ZNF497Q6ZNH5 498 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 ZNF826PQ6ZT77 177 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 TRBV9A0A0B4J1U6 114 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 TRAV3A0A0B4J244 114 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 M0R1X1 148 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 CELA3BP08861 270 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 BRWD1-AS2P59051 145 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 Q6P435 159 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 ARFGEF3Q5TH69 2177 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 KMT2EQ8IZD2 1858 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 DEFB124Q8NES8 71 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 CORO2AQ92828 525 aa14.12□□□□□ -0.15
PTPRA-205ENST00000399903 CADP27708 2225 aa14.11□□□□□ -0.15
PTPRA-205ENST00000399903 A0A087X0K7 114 aa14.11□□□□□ -0.15
PTPRA-205ENST00000399903 GAGE12BA1L429 117 aa14.11□□□□□ -0.15
PTPRA-205ENST00000399903 PSPNO60542 156 aa14.11□□□□□ -0.15
PTPRA-205ENST00000399903 OPRK1P41145 380 aa14.11□□□□□ -0.15
PTPRA-205ENST00000399903 OR4F17Q8NGA8 305 aa14.11□□□□□ -0.15
PTPRA-205ENST00000399903 ZNF292O60281 2723 aa14.11□□□□□ -0.15
PTPRA-205ENST00000399903 CUL9Q8IWT3 2517 aa14.11□□□□□ -0.15
PTPRA-205ENST00000399903 TOX4O94842 621 aa14.11□□□□□ -0.15
PTPRA-205ENST00000399903 MOB1BQ7L9L4 216 aa14.11□□□□□ -0.15
PTPRA-205ENST00000399903 FAM173AQ9BQD7 235 aa14.11□□□□□ -0.15
PTPRA-205ENST00000399903 CEP295Q9C0D2 2601 aa14.11□□□□□ -0.15
PTPRA-205ENST00000399903 AHRRA9YTQ3 701 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 IGFBP2P18065 325 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 MEOX1P50221 254 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 PLA2G2CQ5R387 149 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 SPATA12Q7Z6I5 190 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 SCCPDHQ8NBX0 429 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 RAB1CQ92928 201 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 CSTL1Q9H114 145 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 HCFC1P51610 2035 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 TRAV9-1A0A075B6T8 112 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 K7ERU9 68 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 GOSR1O95249 250 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 CLDN18P56856 261 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 RNFT1Q5M7Z0 435 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 LINC00173Q6ZV60 143 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 MUC15Q8N387 334 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 OR5B3Q8NH48 314 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 ACACAQ13085 2346 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 HSBP1L1C9JCN9 74 aa14.1□□□□□ -0.15
PTPRA-205ENST00000399903 TMEM238C9JI98 176 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 190.9 ms