RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 SHISA2Q6UWI4 295 aa8.17□□□□□ -1.1
NUP98-205ENST00000397007 TMEM14EPQ6UXP3 125 aa8.17□□□□□ -1.1
NUP98-205ENST00000397007 ZNF695Q8IW36 515 aa8.17□□□□□ -1.1
NUP98-205ENST00000397007 C12orf45Q8N5I9 185 aaPredicted RBP8.17□□□□□ -1.1
NUP98-205ENST00000397007 COQ8AQ8NI60 647 aa8.17□□□□□ -1.1
NUP98-205ENST00000397007 ENKURQ8TC29 256 aa8.17□□□□□ -1.1
NUP98-205ENST00000397007 VN1R17PQ8TDU5 208 aa8.17□□□□□ -1.1
NUP98-205ENST00000397007 CITED2Q99967 270 aaPredicted RBP8.17□□□□□ -1.1
NUP98-205ENST00000397007 PARP11Q9NR21 331 aa8.17□□□□□ -1.1
NUP98-205ENST00000397007 LINC00854A0A1B0GVQ3 168 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 MBPP02686 304 aaPredicted RBP8.16□□□□□ -1.1
NUP98-205ENST00000397007 INPP1P49441 399 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 ERVK-16P61578 105 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 CXorf66Q5JRM2 361 aaPredicted RBP8.16□□□□□ -1.1
NUP98-205ENST00000397007 HAPLN4Q86UW8 402 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 STAB1Q9NY15 2570 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 DNAH7Q8WXX0 4024 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 FNDC4Q9H6D8 234 aaPredicted RBP8.16□□□□□ -1.1
NUP98-205ENST00000397007 LINC00527Q9UJ94 153 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 TRAV14DV4A0A0A6YYC5 116 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 A0A1W2PN81 502 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 H0YIZ8 118 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 CXCL3P19876 107 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 CHRNA7P36544 502 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 SMIM8Q96KF7 97 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 OR4C12Q96R67 309 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 CLCC1Q96S66 551 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 RNF126Q9BV68 326 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 MGAT4CQ9UBM8 478 aa8.16□□□□□ -1.1
NUP98-205ENST00000397007 TSSC4Q9Y5U2 329 aaPredicted RBP8.16□□□□□ -1.1
NUP98-205ENST00000397007 COL6A5A8TX70 2615 aa8.15□□□□□ -1.1
NUP98-205ENST00000397007 KPRPQ5T749 579 aaPredicted RBP8.15□□□□□ -1.1
NUP98-205ENST00000397007 PLET1Q6UQ28 207 aa8.15□□□□□ -1.1
NUP98-205ENST00000397007 RAX2Q96IS3 184 aa8.15□□□□□ -1.1
NUP98-205ENST00000397007 USMG5Q96IX5 58 aa8.15□□□□□ -1.1
NUP98-205ENST00000397007 MRPL36Q9P0J6 103 aaKnown RBP8.15□□□□□ -1.1
NUP98-205ENST00000397007 GNB1P62873 340 aa8.15□□□□□ -1.1
NUP98-205ENST00000397007 TRIM16LQ309B1 348 aa8.15□□□□□ -1.1
NUP98-205ENST00000397007 C2orf50Q96LR7 162 aa8.15□□□□□ -1.1
NUP98-205ENST00000397007 FNDC10F2Z333 226 aa8.15□□□□□ -1.11
NUP98-205ENST00000397007 K7EPK0 472 aa8.15□□□□□ -1.11
NUP98-205ENST00000397007 NXPH3O95157 252 aa8.15□□□□□ -1.11
NUP98-205ENST00000397007 CRYBA1P05813 215 aa8.15□□□□□ -1.11
NUP98-205ENST00000397007 LGALS1P09382 135 aaKnown RBP8.15□□□□□ -1.11
NUP98-205ENST00000397007 HIST1H1BP16401 226 aaKnown RBP8.15□□□□□ -1.11
NUP98-205ENST00000397007 LINC00482Q8N8I6 264 aa8.15□□□□□ -1.11
NUP98-205ENST00000397007 NECAP1Q8NC96 275 aa8.15□□□□□ -1.11
NUP98-205ENST00000397007 WSB1Q9Y6I7 421 aa8.15□□□□□ -1.11
NUP98-205ENST00000397007 IGKV1D-37A0A075B6S9 117 aa8.14□□□□□ -1.11
NUP98-205ENST00000397007 NDUFB8O95169 186 aa8.14□□□□□ -1.11
NUP98-205ENST00000397007 UNQ5815/PRO19632Q6UWF5 114 aa8.14□□□□□ -1.11
NUP98-205ENST00000397007 ZNF329Q86UD4 541 aa8.14□□□□□ -1.11
NUP98-205ENST00000397007 LY86O95711 162 aa8.14□□□□□ -1.11
NUP98-205ENST00000397007 TMEM267Q0VDI3 215 aaPredicted RBP8.14□□□□□ -1.11
NUP98-205ENST00000397007 C4orf46Q504U0 113 aa8.14□□□□□ -1.11
NUP98-205ENST00000397007 HUWE1Q7Z6Z7 4374 aaKnown RBP8.14□□□□□ -1.11
NUP98-205ENST00000397007 DEDDO75618 318 aa8.14□□□□□ -1.11
NUP98-205ENST00000397007 VAMP1P23763 118 aa8.14□□□□□ -1.11
NUP98-205ENST00000397007 TMEM116Q8NCL8 245 aa8.14□□□□□ -1.11
NUP98-205ENST00000397007 OR1L6Q8NGR2 347 aa8.14□□□□□ -1.11
NUP98-205ENST00000397007 OR4A16Q8NH70 328 aa8.14□□□□□ -1.11
NUP98-205ENST00000397007 TXN2Q99757 166 aa8.14□□□□□ -1.11
NUP98-205ENST00000397007 BMPR1BO00238 502 aa8.13□□□□□ -1.11
NUP98-205ENST00000397007 TSC22D2O75157 780 aa8.13□□□□□ -1.11
NUP98-205ENST00000397007 HIST2H2BDQ6DRA6 164 aa8.13□□□□□ -1.11
NUP98-205ENST00000397007 RNASEH2CQ8TDP1 164 aaKnown RBP8.13□□□□□ -1.11
NUP98-205ENST00000397007 COMMD5Q9GZQ3 224 aa8.13□□□□□ -1.11
NUP98-205ENST00000397007 RRAS2P62070 204 aaPredicted RBP8.13□□□□□ -1.11
NUP98-205ENST00000397007 KLF5Q13887 457 aaPredicted RBP8.13□□□□□ -1.11
NUP98-205ENST00000397007 ADAMTSL5Q6ZMM2 481 aa8.13□□□□□ -1.11
NUP98-205ENST00000397007 LCNL1Q6ZST4 164 aa8.13□□□□□ -1.11
NUP98-205ENST00000397007 GRPEL2Q8TAA5 225 aa8.13□□□□□ -1.11
NUP98-205ENST00000397007 SIGLEC8Q9NYZ4 499 aa8.13□□□□□ -1.11
NUP98-205ENST00000397007 A8MWP6 167 aa8.13□□□□□ -1.11
NUP98-205ENST00000397007 ADMP35318 185 aa8.13□□□□□ -1.11
NUP98-205ENST00000397007 HTR2BP41595 481 aa8.13□□□□□ -1.11
NUP98-205ENST00000397007 SLC35B1P78383 322 aa8.13□□□□□ -1.11
NUP98-205ENST00000397007 THAP8Q8NA92 274 aa8.13□□□□□ -1.11
NUP98-205ENST00000397007 MEGF8Q7Z7M0 2845 aa8.13□□□□□ -1.11
NUP98-205ENST00000397007 DYNC2H1Q8NCM8 4307 aaKnown RBP8.12□□□□□ -1.11
NUP98-205ENST00000397007 MFSD2BA6NFX1 497 aa8.12□□□□□ -1.11
NUP98-205ENST00000397007 TSPAN15O95858 294 aa8.12□□□□□ -1.11
NUP98-205ENST00000397007 C8orf88P0DMB2 117 aa8.12□□□□□ -1.11
NUP98-205ENST00000397007 RAB25P57735 213 aa8.12□□□□□ -1.11
NUP98-205ENST00000397007 REC114Q7Z4M0 266 aa8.12□□□□□ -1.11
NUP98-205ENST00000397007 DTD1Q8TEA8 209 aa8.12□□□□□ -1.11
NUP98-205ENST00000397007 CASTOR1Q8WTX7 329 aa8.12□□□□□ -1.11
NUP98-205ENST00000397007 U3KQ87 197 aa8.12□□□□□ -1.11
NUP98-205ENST00000397007 CCSO14618 274 aa8.12□□□□□ -1.11
NUP98-205ENST00000397007 SYNGR2O43760 224 aa8.12□□□□□ -1.11
NUP98-205ENST00000397007 DHFRP00374 187 aa8.12□□□□□ -1.11
NUP98-205ENST00000397007 TRBV12-3P01733 135 aa8.12□□□□□ -1.11
NUP98-205ENST00000397007 FAM209BQ5JX69 171 aa8.12□□□□□ -1.11
NUP98-205ENST00000397007 RRNAD1Q96FB5 475 aaKnown RBP8.12□□□□□ -1.11
NUP98-205ENST00000397007 GPN1Q9HCN4 374 aaPredicted RBP8.12□□□□□ -1.11
NUP98-205ENST00000397007 LSM4Q9Y4Z0 139 aaKnown RBP8.12□□□□□ -1.11
NUP98-205ENST00000397007 TRBV7-1A0A0A6YYK4 115 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 LGALS9O00182 355 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 SNAPC5O75971 98 aa8.11□□□□□ -1.11
NUP98-205ENST00000397007 PRH1P02810 166 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms