RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 C11orf53Q8IXP5 236 aa19.78■□□□□ 0.76
CSNK1E-203ENST00000396832 HINT2Q9BX68 163 aa19.78■□□□□ 0.76
CSNK1E-203ENST00000396832 INTS1Q8N201 2190 aaKnown RBP19.77■□□□□ 0.76
CSNK1E-203ENST00000396832 APCSP02743 223 aa19.77■□□□□ 0.76
CSNK1E-203ENST00000396832 MRPL49Q13405 166 aaKnown RBP19.77■□□□□ 0.76
CSNK1E-203ENST00000396832 STPG3Q8N7X2 389 aa19.77■□□□□ 0.76
CSNK1E-203ENST00000396832 WDR31Q8NA23 367 aa19.77■□□□□ 0.76
CSNK1E-203ENST00000396832 OR4A16Q8NH70 328 aa19.77■□□□□ 0.76
CSNK1E-203ENST00000396832 IGLC7A0M8Q6 106 aa19.77■□□□□ 0.75
CSNK1E-203ENST00000396832 TMPRSS3P57727 454 aa19.77■□□□□ 0.75
CSNK1E-203ENST00000396832 ACP7Q6ZNF0 438 aa19.77■□□□□ 0.75
CSNK1E-203ENST00000396832 HSD17B10Q99714 261 aaKnown RBP19.77■□□□□ 0.75
CSNK1E-203ENST00000396832 NPVFQ9HCQ7 196 aa19.77■□□□□ 0.75
CSNK1E-203ENST00000396832 TIMM8AO60220 97 aaPredicted RBP19.76■□□□□ 0.75
CSNK1E-203ENST00000396832 LOXL4Q96JB6 756 aa19.76■□□□□ 0.75
CSNK1E-203ENST00000396832 HES4Q9HCC6 221 aa19.76■□□□□ 0.75
CSNK1E-203ENST00000396832 OSTCQ9NRP0 149 aa19.76■□□□□ 0.75
CSNK1E-203ENST00000396832 LSM4Q9Y4Z0 139 aaKnown RBP19.76■□□□□ 0.75
CSNK1E-203ENST00000396832 CEP250Q9BV73 2442 aa19.76■□□□□ 0.75
CSNK1E-203ENST00000396832 IGHV1-69-2A0A0G2JMI3 117 aa19.76■□□□□ 0.75
CSNK1E-203ENST00000396832 SP1P08047 785 aa19.76■□□□□ 0.75
CSNK1E-203ENST00000396832 AREGP15514 252 aa19.76■□□□□ 0.75
CSNK1E-203ENST00000396832 OR4F17Q8NGA8 305 aa19.76■□□□□ 0.75
CSNK1E-203ENST00000396832 ROS1P08922 2347 aa19.75■□□□□ 0.75
CSNK1E-203ENST00000396832 IGHV3OR15-7A0A075B7D8 119 aa19.75■□□□□ 0.75
CSNK1E-203ENST00000396832 TRAV9-2A0A087WT02 112 aa19.75■□□□□ 0.75
CSNK1E-203ENST00000396832 VDAC2P45880 294 aaPredicted RBP19.75■□□□□ 0.75
CSNK1E-203ENST00000396832 WDR82Q6UXN9 313 aa19.75■□□□□ 0.75
CSNK1E-203ENST00000396832 PNKDQ8N490 385 aa19.75■□□□□ 0.75
CSNK1E-203ENST00000396832 SERTAD4Q9NUC0 356 aa19.75■□□□□ 0.75
CSNK1E-203ENST00000396832 GFRA3O60609 400 aa19.75■□□□□ 0.75
CSNK1E-203ENST00000396832 SELENOVP59797 346 aa19.75■□□□□ 0.75
CSNK1E-203ENST00000396832 TIGITQ495A1 244 aa19.75■□□□□ 0.75
CSNK1E-203ENST00000396832 Q56UQ5 140 aa19.75■□□□□ 0.75
CSNK1E-203ENST00000396832 VAMP3Q15836 100 aa19.74■□□□□ 0.75
CSNK1E-203ENST00000396832 SLC35E4Q6ICL7 350 aa19.74■□□□□ 0.75
CSNK1E-203ENST00000396832 LAMTOR5O43504 91 aa19.74■□□□□ 0.75
CSNK1E-203ENST00000396832 IGLL1P15814 213 aa19.74■□□□□ 0.75
CSNK1E-203ENST00000396832 TNXAQ16473 311 aa19.74■□□□□ 0.75
CSNK1E-203ENST00000396832 C18orf32Q8TCD1 76 aa19.74■□□□□ 0.75
CSNK1E-203ENST00000396832 IL19Q9UHD0 177 aa19.74■□□□□ 0.75
CSNK1E-203ENST00000396832 M0QZ24 198 aa19.73■□□□□ 0.75
CSNK1E-203ENST00000396832 SLAQ13239 276 aa19.73■□□□□ 0.75
CSNK1E-203ENST00000396832 MIR17HGQ75NE6 70 aa19.73■□□□□ 0.75
CSNK1E-203ENST00000396832 ERASQ7Z444 233 aa19.73■□□□□ 0.75
CSNK1E-203ENST00000396832 MUC15Q8N387 334 aa19.73■□□□□ 0.75
CSNK1E-203ENST00000396832 GSX1Q9H4S2 264 aaPredicted RBP19.73■□□□□ 0.75
CSNK1E-203ENST00000396832 PCNX2A6NKB5 2137 aa19.73■□□□□ 0.75
CSNK1E-203ENST00000396832 IQCF6A8MYZ5 107 aa19.73■□□□□ 0.75
CSNK1E-203ENST00000396832 DUTP33316 252 aaKnown RBP19.73■□□□□ 0.75
CSNK1E-203ENST00000396832 PSG5Q15238 335 aa19.73■□□□□ 0.75
CSNK1E-203ENST00000396832 AARDQ4LEZ3 155 aa19.73■□□□□ 0.75
CSNK1E-203ENST00000396832 TEPPQ6URK8 271 aa19.73■□□□□ 0.75
CSNK1E-203ENST00000396832 USF1P22415 310 aaPredicted RBP19.72■□□□□ 0.75
CSNK1E-203ENST00000396832 RELBQ01201 579 aa19.72■□□□□ 0.75
CSNK1E-203ENST00000396832 CD177Q8N6Q3 437 aa19.72■□□□□ 0.75
CSNK1E-203ENST00000396832 TRGV5A0A0B4J1U4 118 aa19.72■□□□□ 0.75
CSNK1E-203ENST00000396832 SMIM27A0A1W2PRY6 76 aa19.72■□□□□ 0.75
CSNK1E-203ENST00000396832 ISLRO14498 428 aa19.72■□□□□ 0.75
CSNK1E-203ENST00000396832 MGST1P10620 155 aaKnown RBP19.72■□□□□ 0.75
CSNK1E-203ENST00000396832 IBA57Q5T440 356 aaKnown RBP19.72■□□□□ 0.75
CSNK1E-203ENST00000396832 EBLN2Q6P2I7 272 aa19.72■□□□□ 0.75
CSNK1E-203ENST00000396832 MRPL27Q9P0M9 148 aaKnown RBP19.72■□□□□ 0.75
CSNK1E-203ENST00000396832 LRRC29Q8WV35 223 aa19.72■□□□□ 0.75
CSNK1E-203ENST00000396832 DUSP13Q9UII6 198 aa19.72■□□□□ 0.75
CSNK1E-203ENST00000396832 RNF24Q9Y225 148 aa19.72■□□□□ 0.75
CSNK1E-203ENST00000396832 EP300Q09472 2414 aaPredicted RBP19.71■□□□□ 0.75
CSNK1E-203ENST00000396832 TRAV30A0A087WSZ9 112 aa19.71■□□□□ 0.75
CSNK1E-203ENST00000396832 FAM181BA6NEQ2 426 aa19.71■□□□□ 0.75
CSNK1E-203ENST00000396832 SPINT2O43291 252 aa19.71■□□□□ 0.75
CSNK1E-203ENST00000396832 HSBP1O75506 76 aa19.71■□□□□ 0.75
CSNK1E-203ENST00000396832 CA1P00915 261 aaPredicted RBP19.71■□□□□ 0.75
CSNK1E-203ENST00000396832 ZNF134P52741 427 aa19.71■□□□□ 0.75
CSNK1E-203ENST00000396832 MOB3BQ86TA1 216 aa19.71■□□□□ 0.75
CSNK1E-203ENST00000396832 ZNF331Q9NQX6 463 aaPredicted RBP19.71■□□□□ 0.75
CSNK1E-203ENST00000396832 DMXL2Q8TDJ6 3036 aa19.71■□□□□ 0.75
CSNK1E-203ENST00000396832 C1orf229Q6ZS94 237 aaPredicted RBP19.71■□□□□ 0.75
CSNK1E-203ENST00000396832 ZNRF1Q8ND25 227 aa19.71■□□□□ 0.75
CSNK1E-203ENST00000396832 A0A1W2PN81 502 aa19.7■□□□□ 0.74
CSNK1E-203ENST00000396832 AHRRA9YTQ3 701 aa19.7■□□□□ 0.74
CSNK1E-203ENST00000396832 H0YJW9 148 aa19.7■□□□□ 0.74
CSNK1E-203ENST00000396832 TRIB1Q96RU8 372 aa19.7■□□□□ 0.74
CSNK1E-203ENST00000396832 M0R2Z0 102 aa19.7■□□□□ 0.74
CSNK1E-203ENST00000396832 LINC00869P0C866 280 aa19.7■□□□□ 0.74
CSNK1E-203ENST00000396832 GATA2P23769 480 aaPredicted RBP19.7■□□□□ 0.74
CSNK1E-203ENST00000396832 PRR31Q5SQ13 230 aa19.7■□□□□ 0.74
CSNK1E-203ENST00000396832 TMEM140Q9NV12 185 aa19.7■□□□□ 0.74
CSNK1E-203ENST00000396832 PLCE1Q9P212 2302 aa19.7■□□□□ 0.74
CSNK1E-203ENST00000396832 CBY3A6NI87 242 aa19.69■□□□□ 0.74
CSNK1E-203ENST00000396832 KLRC4-KLRK1H3BQV0 150 aa19.69■□□□□ 0.74
CSNK1E-203ENST00000396832 FAM216AQ8WUB2 273 aa19.69■□□□□ 0.74
CSNK1E-203ENST00000396832 GCM1Q9NP62 436 aa19.69■□□□□ 0.74
CSNK1E-203ENST00000396832 TECRQ9NZ01 308 aaKnown RBP19.69■□□□□ 0.74
CSNK1E-203ENST00000396832 IZUMO1RA6ND01 250 aa19.69■□□□□ 0.74
CSNK1E-203ENST00000396832 IGLV2-8P01709 118 aa19.69■□□□□ 0.74
CSNK1E-203ENST00000396832 RAB31Q13636 194 aa19.69■□□□□ 0.74
CSNK1E-203ENST00000396832 OR52E5Q8NH55 327 aa19.69■□□□□ 0.74
CSNK1E-203ENST00000396832 KLF13Q9Y2Y9 288 aaPredicted RBP19.69■□□□□ 0.74
CSNK1E-203ENST00000396832 PPBPP02775 128 aa19.68■□□□□ 0.74
CSNK1E-203ENST00000396832 FAM201AQ5SY85 155 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms