RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 LAMA1P25391 3075 aa4.42□□□□□ -1.7
VPS41-203ENST00000395969 SHISA9B4DS77 424 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 H3BP45 60 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 K7EM74 188 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 LOXL3P58215 753 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 HERV-K104P61576 105 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 ARL16Q0P5N6 197 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 TCF23Q7RTU1 214 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 HAPLN4Q86UW8 402 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 LHX4Q969G2 390 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 COQ2Q96H96 371 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 WDR61Q9GZS3 305 aaKnown RBP4.41□□□□□ -1.7
VPS41-203ENST00000395969 MRPL27Q9P0M9 148 aaKnown RBP4.41□□□□□ -1.7
VPS41-203ENST00000395969 TRAV9-1A0A075B6T8 112 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 SCGB2A1O75556 95 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 PGLYRP1O75594 196 aaPredicted RBP4.41□□□□□ -1.7
VPS41-203ENST00000395969 NPPCP23582 126 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 F2RP25116 425 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 DLX6P56179 175 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 TMEM267Q0VDI3 215 aaPredicted RBP4.41□□□□□ -1.7
VPS41-203ENST00000395969 C20orf204Q6ZNR8 217 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 ZNF818PQ6ZRF7 136 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 GPHA2Q96T91 129 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 HSD17B10Q99714 261 aaKnown RBP4.41□□□□□ -1.7
VPS41-203ENST00000395969 IGKV1D-17A0A075B6S4 117 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 SAA2-SAA4A0A096LPE2 208 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 IGHV2-26A0A0B4J1V2 119 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 A0A0G2JRQ6 117 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 ANGPTL7O43827 346 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 SPINK4O60575 86 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 REG1AP05451 166 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 GPX1P07203 203 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 CA6P23280 308 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 FFAR4Q5NUL3 377 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 OR4A47Q6IF82 309 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 C11orf71Q6IPW1 123 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 DTX2Q86UW9 622 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 NHLRC2Q8NBF2 726 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 OR10V1Q8NGI7 309 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 SLC39A9Q9NUM3 307 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 CDC42EP3Q9UKI2 254 aa4.41□□□□□ -1.7
VPS41-203ENST00000395969 IGHV1-69-2A0A0G2JMI3 117 aa4.4□□□□□ -1.7
VPS41-203ENST00000395969 CTXND1A0A1B0GTU2 59 aa4.4□□□□□ -1.7
VPS41-203ENST00000395969 DIRC3C9JPN6 131 aa4.4□□□□□ -1.7
VPS41-203ENST00000395969 RHBDL1O75783 438 aa4.4□□□□□ -1.7
VPS41-203ENST00000395969 KRASP01116 189 aa4.4□□□□□ -1.7
VPS41-203ENST00000395969 CRISP2P16562 243 aa4.4□□□□□ -1.7
VPS41-203ENST00000395969 CCNOP22674 350 aa4.4□□□□□ -1.7
VPS41-203ENST00000395969 TSPOP30536 169 aa4.4□□□□□ -1.7
VPS41-203ENST00000395969 OCIAD2Q56VL3 154 aa4.4□□□□□ -1.7
VPS41-203ENST00000395969 PRR27Q6MZM9 219 aa4.4□□□□□ -1.7
VPS41-203ENST00000395969 CD177Q8N6Q3 437 aa4.4□□□□□ -1.7
VPS41-203ENST00000395969 OR4F5Q8NH21 305 aa4.4□□□□□ -1.7
VPS41-203ENST00000395969 TAF15Q92804 592 aaKnown RBP eCLIP4.4□□□□□ -1.7
VPS41-203ENST00000395969 UHRF2Q96PU4 802 aa4.4□□□□□ -1.7
VPS41-203ENST00000395969 OR4F4Q96R69 305 aa4.4□□□□□ -1.7
VPS41-203ENST00000395969 NAA38Q9BRA0 125 aaKnown RBP4.4□□□□□ -1.7
VPS41-203ENST00000395969 CST9LQ9H4G1 147 aa4.4□□□□□ -1.7
VPS41-203ENST00000395969 LIN7CQ9NUP9 197 aaKnown RBP4.4□□□□□ -1.7
VPS41-203ENST00000395969 TRGV8A0A0C4DH27 118 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 IGLC7A0M8Q6 106 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 NDUFS8O00217 210 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 LYZL6O75951 148 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 IGHV1-46P01743 117 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 CRYAAP02489 173 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 EDN2P20800 178 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 PRR31Q5SQ13 230 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 PNKDQ8N490 385 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 KIR3DL3Q8N743 410 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 LY6G5BQ8NDX9 201 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 OR5B3Q8NH48 314 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 OR4A5Q8NH83 315 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 GATAD1Q8WUU5 269 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 SNRNP40Q96DI7 357 aaKnown RBP4.4□□□□□ -1.71
VPS41-203ENST00000395969 ADTRPQ96IZ2 230 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 BET1LQ9NYM9 111 aa4.4□□□□□ -1.71
VPS41-203ENST00000395969 FBLL1A6NHQ2 334 aaKnown RBP4.39□□□□□ -1.71
VPS41-203ENST00000395969 F2Z2F3 143 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 ZNF561-AS1K7EIQ3 104 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 ZNF207O43670 478 aaKnown RBP4.39□□□□□ -1.71
VPS41-203ENST00000395969 PSG2P11465 335 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 EGR1P18146 543 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 PMCHP20382 165 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 S100GP29377 79 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 HBG1P69891 147 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 HBG2P69892 147 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 ACSM6Q6P461 480 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 LHFPL4Q7Z7J7 247 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 OR4F17Q8NGA8 305 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 SGMS2Q8NHU3 365 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 SFRP2Q96HF1 295 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 GCM1Q9NP62 436 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 TIMM8BQ9Y5J9 83 aaPredicted RBP4.39□□□□□ -1.71
VPS41-203ENST00000395969 LINC00312Q9Y6C7 94 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 DPRXA6NFQ7 191 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 C17orf100A8MU93 164 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 PDE6DO43924 150 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 PSPNO60542 156 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 ZNF253O75346 499 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 NTF3P20783 257 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms