RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 OVOL3O00110 214 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 ACTL6BO94805 426 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 PRSS8Q16651 343 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 MLANAQ16655 118 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 MMD2Q8IY49 270 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 KCNIP2Q9NS61 270 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 TACC2O95359 2948 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 SEC14L6B5MCN3 397 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 TIMM23O14925 209 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 CRYGBP07316 175 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 B2MP61769 119 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 LCN2P80188 198 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 PMS2P11Q13670 270 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 TNXAQ16473 311 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 HCP5Q6MZN7 132 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 VMO1Q7Z5L0 202 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 BPESC1Q9GZL8 116 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 METTL1Q9UBP6 276 aaKnown RBP12.1□□□□□ -0.47
SNX2-201ENST00000379516 SIGLEC9Q9Y336 463 aa12.1□□□□□ -0.47
SNX2-201ENST00000379516 C7orf77A4D0Y5 90 aa12.09□□□□□ -0.47
SNX2-201ENST00000379516 ATF4P18848 351 aaPredicted RBP12.09□□□□□ -0.47
SNX2-201ENST00000379516 CEACAM3P40198 252 aa12.09□□□□□ -0.47
SNX2-201ENST00000379516 SUB1P53999 127 aaKnown RBP eCLIP12.09□□□□□ -0.472e-11■■■■■ 65
SNX2-201ENST00000379516 CD69Q07108 199 aa12.09□□□□□ -0.47
SNX2-201ENST00000379516 GAMTQ14353 236 aa12.09□□□□□ -0.47
SNX2-201ENST00000379516 C1orf122Q6ZSJ8 110 aa12.09□□□□□ -0.47
SNX2-201ENST00000379516 TMEM144Q7Z5S9 345 aa12.09□□□□□ -0.47
SNX2-201ENST00000379516 LHFPL4Q7Z7J7 247 aa12.09□□□□□ -0.47
SNX2-201ENST00000379516 STPG3Q8N7X2 389 aa12.09□□□□□ -0.47
SNX2-201ENST00000379516 P2RX4Q99571 388 aa12.09□□□□□ -0.47
SNX2-201ENST00000379516 ODF3BA8MYP8 253 aa12.08□□□□□ -0.47
SNX2-201ENST00000379516 H3BQ15 152 aa12.08□□□□□ -0.47
SNX2-201ENST00000379516 REG1AP05451 166 aa12.08□□□□□ -0.47
SNX2-201ENST00000379516 RNF224P0DH78 156 aa12.08□□□□□ -0.47
SNX2-201ENST00000379516 RPL29P47914 159 aaKnown RBP12.08□□□□□ -0.47
SNX2-201ENST00000379516 PSMB3P49720 205 aa12.08□□□□□ -0.47
SNX2-201ENST00000379516 GNB1P62873 340 aa12.08□□□□□ -0.47
SNX2-201ENST00000379516 SLC35E3Q7Z769 313 aa12.08□□□□□ -0.47
SNX2-201ENST00000379516 PPP1R27Q86WC6 154 aa12.08□□□□□ -0.47
SNX2-201ENST00000379516 KIR3DL3Q8N743 410 aa12.08□□□□□ -0.47
SNX2-201ENST00000379516 CACNA1BQ00975 2339 aa12.08□□□□□ -0.48
SNX2-201ENST00000379516 PAX6P26367 422 aa12.08□□□□□ -0.48
SNX2-201ENST00000379516 RPL27AP46776 148 aaKnown RBP12.08□□□□□ -0.48
SNX2-201ENST00000379516 GATAD1Q8WUU5 269 aa12.08□□□□□ -0.48
SNX2-201ENST00000379516 BBC3Q96PG8 261 aaPredicted RBP12.08□□□□□ -0.48
SNX2-201ENST00000379516 RNF5Q99942 180 aa12.08□□□□□ -0.48
SNX2-201ENST00000379516 FBXL15Q9H469 300 aa12.08□□□□□ -0.48
SNX2-201ENST00000379516 ARHGAP32A7KAX9 2087 aa12.08□□□□□ -0.48
SNX2-201ENST00000379516 USP24Q9UPU5 2620 aa12.08□□□□□ -0.48
SNX2-201ENST00000379516 VENTXO95231 258 aa12.07□□□□□ -0.48
SNX2-201ENST00000379516 IGHV4-39P01824 125 aa12.07□□□□□ -0.48
SNX2-201ENST00000379516 GPX4P36969 197 aaPredicted RBP12.07□□□□□ -0.48
SNX2-201ENST00000379516 PLGLAQ15195 96 aa12.07□□□□□ -0.48
SNX2-201ENST00000379516 SLC16A13Q7RTY0 426 aa12.07□□□□□ -0.48
SNX2-201ENST00000379516 IGFBPL1Q8WX77 278 aa12.07□□□□□ -0.48
SNX2-201ENST00000379516 CACNG8Q8WXS5 425 aa12.07□□□□□ -0.48
SNX2-201ENST00000379516 NIPSNAP3BQ9BS92 247 aa12.07□□□□□ -0.48
SNX2-201ENST00000379516 MANBALQ9NQG1 85 aa12.07□□□□□ -0.48
SNX2-201ENST00000379516 SMCO4Q9NRQ5 59 aa12.07□□□□□ -0.48
SNX2-201ENST00000379516 IGKV1OR2-108A0A075B7D4 117 aa12.07□□□□□ -0.48
SNX2-201ENST00000379516 MAS1LP35410 378 aa12.07□□□□□ -0.48
SNX2-201ENST00000379516 COMPP49747 757 aaPredicted RBP12.07□□□□□ -0.48
SNX2-201ENST00000379516 MEF2BQ02080 365 aaPredicted RBP12.07□□□□□ -0.48
SNX2-201ENST00000379516 RHEBQ15382 184 aa12.07□□□□□ -0.48
SNX2-201ENST00000379516 FAM90A2PQ658T7 463 aa12.07□□□□□ -0.48
SNX2-201ENST00000379516 MRPL41Q8IXM3 137 aaKnown RBP12.07□□□□□ -0.48
SNX2-201ENST00000379516 OR2T6Q8NHC8 308 aa12.07□□□□□ -0.48
SNX2-201ENST00000379516 RNASEH2CQ8TDP1 164 aaKnown RBP12.07□□□□□ -0.48
SNX2-201ENST00000379516 SLC35E1Q96K37 410 aa12.07□□□□□ -0.48
SNX2-201ENST00000379516 IGLC7A0M8Q6 106 aa12.06□□□□□ -0.48
SNX2-201ENST00000379516 GOSR1O95249 250 aa12.06□□□□□ -0.48
SNX2-201ENST00000379516 APELAP0DMC3 54 aa12.06□□□□□ -0.48
SNX2-201ENST00000379516 CD81P60033 236 aa12.06□□□□□ -0.48
SNX2-201ENST00000379516 LMO4P61968 165 aa12.06□□□□□ -0.48
SNX2-201ENST00000379516 PRR20EP86478 221 aa12.06□□□□□ -0.48
SNX2-201ENST00000379516 PRR20CP86479 221 aa12.06□□□□□ -0.48
SNX2-201ENST00000379516 PRR20DP86480 221 aa12.06□□□□□ -0.48
SNX2-201ENST00000379516 PRR20BP86481 221 aa12.06□□□□□ -0.48
SNX2-201ENST00000379516 PRR20AP86496 221 aa12.06□□□□□ -0.48
SNX2-201ENST00000379516 ABHD5Q8WTS1 349 aa12.06□□□□□ -0.48
SNX2-201ENST00000379516 CFHR4Q92496 578 aa12.06□□□□□ -0.48
SNX2-201ENST00000379516 ACY3Q96HD9 319 aa12.06□□□□□ -0.48
SNX2-201ENST00000379516 CCL19Q99731 98 aa12.06□□□□□ -0.48
SNX2-201ENST00000379516 SLC45A2Q9UMX9 530 aa12.06□□□□□ -0.48
SNX2-201ENST00000379516 IGHV2-70DA0A0C4DH43 119 aa12.05□□□□□ -0.48
SNX2-201ENST00000379516 PAGE4O60829 102 aa12.05□□□□□ -0.48
SNX2-201ENST00000379516 LINC00869P0C866 280 aa12.05□□□□□ -0.48
SNX2-201ENST00000379516 HOXB4P17483 251 aaPredicted RBP12.05□□□□□ -0.48
SNX2-201ENST00000379516 CD24P25063 80 aa12.05□□□□□ -0.48
SNX2-201ENST00000379516 OR10J1P30954 320 aa12.05□□□□□ -0.48
SNX2-201ENST00000379516 TAGLN2P37802 199 aaKnown RBP12.05□□□□□ -0.48
SNX2-201ENST00000379516 PDLIM4P50479 330 aa12.05□□□□□ -0.48
SNX2-201ENST00000379516 PAX2Q02962 417 aa12.05□□□□□ -0.48
SNX2-201ENST00000379516 MMDQ15546 238 aa12.05□□□□□ -0.48
SNX2-201ENST00000379516 SSX2Q16385 188 aa12.05□□□□□ -0.48
SNX2-201ENST00000379516 STAG3L2P0CL84 134 aa12.05□□□□□ -0.48
SNX2-201ENST00000379516 STAG3L3P0CL85 134 aa12.05□□□□□ -0.48
SNX2-201ENST00000379516 AREGP15514 252 aa12.05□□□□□ -0.48
SNX2-201ENST00000379516 GATA2P23769 480 aaPredicted RBP12.05□□□□□ -0.48
SNX2-201ENST00000379516 LGALS4P56470 323 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms