RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 EBLN2Q6P2I7 272 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 ZNF738Q8NE65 137 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 DIDO1Q9BTC0 2240 aaKnown RBP9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 LOC389332A0A1B0GUA5 103 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 SRRM5B3KS81 715 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 NPPCP23582 126 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 DUTP33316 252 aaKnown RBP9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 RELQ04864 619 aaPredicted RBP9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 TM4SF20Q53R12 229 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 FBXL15Q9H469 300 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 NLRC5Q86WI3 1866 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 ICAM4Q14773 271 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 FAM106AQ4KMX7 169 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 MBD3L1Q8WWY6 194 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 WDR83OSQ9Y284 106 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 KIAA2026Q5HYC2 2103 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 SAA2-SAA4A0A096LPE2 208 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 ETV2O00321 342 aaPredicted RBP9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 SAA2P0DJI9 122 aaPredicted RBP9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 PLAURQ03405 335 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 SRSF4Q08170 494 aaKnown RBP9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 LURAP1LQ8IV03 231 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 PLSCR4Q9NRQ2 329 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 MPDZO75970 2070 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 IGHV1-18A0A0C4DH31 117 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 CBLN1P23435 193 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 HBBP68871 147 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 SRSF9Q13242 221 aaKnown RBP eCLIP9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 C12orf54Q6X4T0 127 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 EEF1AKMT3Q96AZ1 226 aa9.91□□□□□ -0.82
DEPDC1-201ENST00000370966 ATP5G2Q06055 141 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 OR10AG1Q8NH19 301 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 MAP1LC3AQ9H492 121 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 MGAMO43451 1857 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 TRBV6-6A0A0A6YYG2 114 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 ATP5G3P48201 142 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 ATP5J2P56134 94 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 OR52E5Q8NH55 327 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 ATG101Q9BSB4 218 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 ELOVL1Q9BW60 279 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 H3BTX0 84 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 PEX7O00628 323 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 CD5P06127 495 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 SAA1P0DJI8 122 aaPredicted RBP9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 HTN1P15515 57 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 ANOS1P23352 680 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 TIMP3P35625 211 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 DLX1P56177 255 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 RPL23P62829 140 aaKnown RBP9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 SPATA45Q537H7 98 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 SGK494Q96LW2 274 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 SSBP3Q9BWW4 388 aaPredicted RBP9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 CYTL1Q9NRR1 136 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 ZNF407Q9C0G0 2248 aa9.9□□□□□ -0.82
DEPDC1-201ENST00000370966 CACNA1BQ00975 2339 aa9.9□□□□□ -0.83
DEPDC1-201ENST00000370966 GRIFINA4D1Z8 144 aa9.9□□□□□ -0.83
DEPDC1-201ENST00000370966 COX6B1P14854 86 aa9.9□□□□□ -0.83
DEPDC1-201ENST00000370966 DOCK7Q96N67 2140 aa9.9□□□□□ -0.83
DEPDC1-201ENST00000370966 SCO2A0A1W2PP80 73 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 RAMP3O60896 148 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 IL18BPO95998 194 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 CCL3L1P16619 93 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 B3GALT5-AS1P59052 145 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 Q0VFX4 171 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 Q6ZS49 121 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 RNASE6Q93091 150 aaKnown RBP9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 HOXA5P20719 270 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 EAF1Q96JC9 268 aaPredicted RBP9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 SOX21Q9Y651 276 aaPredicted RBP9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 HEATR5AQ86XA9 2040 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 HLA-DRB1P01911 266 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 CX3CL1P78423 397 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 TBR1Q16650 682 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 NMSQ5H8A3 153 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 MBNL2Q5VZF2 373 aaKnown RBP9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 WFDC1Q9HC57 220 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 TRAV1-1A0A0B4J248 108 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 CCL20P78556 96 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 RNFT1Q5M7Z0 435 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 TMEM70Q9BUB7 260 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 RSPO3Q9BXY4 272 aaPredicted RBP9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 C21orf62Q9NYP8 219 aa9.89□□□□□ -0.83
DEPDC1-201ENST00000370966 SRSF3P84103 164 aaKnown RBP9.88□□□□□ -0.83
DEPDC1-201ENST00000370966 MIR17HGQ75NE6 70 aa9.88□□□□□ -0.83
DEPDC1-201ENST00000370966 MDS2Q8NDY4 140 aa9.88□□□□□ -0.83
DEPDC1-201ENST00000370966 C5orf63A6NC05 138 aa9.88□□□□□ -0.83
DEPDC1-201ENST00000370966 DLX6P56179 175 aa9.88□□□□□ -0.83
DEPDC1-201ENST00000370966 PRCDQ00LT1 54 aa9.88□□□□□ -0.83
DEPDC1-201ENST00000370966 ASCL4Q6XD76 172 aa9.88□□□□□ -0.83
DEPDC1-201ENST00000370966 SYT8Q8NBV8 401 aa9.88□□□□□ -0.83
DEPDC1-201ENST00000370966 AP5S1Q9NUS5 200 aa9.88□□□□□ -0.83
DEPDC1-201ENST00000370966 PHLDA3Q9Y5J5 127 aa9.88□□□□□ -0.83
DEPDC1-201ENST00000370966 A0A1W2PRE2 83 aa9.88□□□□□ -0.83
DEPDC1-201ENST00000370966 NMUP48645 174 aa9.88□□□□□ -0.83
DEPDC1-201ENST00000370966 SMAGPQ0VAQ4 97 aa9.88□□□□□ -0.83
DEPDC1-201ENST00000370966 TMEM133Q9H2Q1 129 aa9.88□□□□□ -0.83
DEPDC1-201ENST00000370966 RPUSD1Q9UJJ7 312 aaKnown RBP9.88□□□□□ -0.83
DEPDC1-201ENST00000370966 SIAH2O43255 324 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 CD55P08174 381 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 BTF3P20290 206 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms