RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 SHPKQ9UHJ6 478 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 TMEM56-RWDD3S4R434 201 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 ABCA1O95477 2261 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 TLN2Q9Y4G6 2542 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 MPTX1A8MV57 137 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 B4DSR2 109 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 H0Y980 276 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 BUB1B-PAK6H3BSN5 160 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 RAMP3O60896 148 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 CDS2O95674 445 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 ARG1P05089 322 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 HLA-GP17693 338 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 RAB4AP20338 218 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 C4BPBP20851 252 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 PAX6P26367 422 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 RAB13P51153 203 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 ZNF137PP52743 207 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 PRRX1P54821 245 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 H2BFSP57053 126 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 TMEM249Q2WGJ8 235 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 Q5BKY6 102 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 OR2B11Q5JQS5 317 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 PXDC1Q5TGL8 231 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 ZNF66Q6ZN08 573 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 ERASQ7Z444 233 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 STHQ8IWL8 128 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 LRTM2Q8N967 370 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 THAP8Q8NA92 274 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 OR10X1Q8NGY0 326 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 TCTEX1D2Q8WW35 142 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 LHX4Q969G2 390 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 OR10C1Q96KK4 312 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 PHB2Q99623 299 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 HSD17B10Q99714 261 aaKnown RBP2.84□□□□□ -1.96
MCF2-202ENST00000370573 NABP2Q9BQ15 211 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 TPPP3Q9BW30 176 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 MRPL20Q9BYC9 149 aaKnown RBP2.84□□□□□ -1.96
MCF2-202ENST00000370573 HEXA-AS1Q9H8Q6 139 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 HIF1ANQ9NWT6 349 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 KCNIP3Q9Y2W7 256 aa2.84□□□□□ -1.96
MCF2-202ENST00000370573 SOX21Q9Y651 276 aaPredicted RBP2.84□□□□□ -1.96
MCF2-202ENST00000370573 ZNF469Q96JG9 3925 aaPredicted RBP2.84□□□□□ -1.96
MCF2-202ENST00000370573 SVEP1Q4LDE5 3571 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 IGHV3OR16-10A0A075B7F0 116 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 A0A0G2JRQ6 117 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 CENPVL3A0A0U1RRI6 287 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 SMLR1H3BR10 107 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 GOSR2O14653 212 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 RBMXL2O75526 392 aaKnown RBP2.83□□□□□ -1.96
MCF2-202ENST00000370573 OR2A4O95047 310 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 S1PR2O95136 353 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 IGKV1-5P01602 117 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 C1QBP02746 253 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 RPA2P15927 270 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 ZP3P21754 424 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 S100PP25815 95 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 THBS3P49746 956 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 UBE2E1P51965 193 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 PROK1P58294 105 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 ZNF816Q0VGE8 651 aaPredicted RBP2.83□□□□□ -1.96
MCF2-202ENST00000370573 IL15RAQ13261 267 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 IZUMO4Q1ZYL8 232 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 KLF17Q5JT82 389 aaPredicted RBP2.83□□□□□ -1.96
MCF2-202ENST00000370573 TPTE2P1Q5T6R2 138 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 Q75L30 129 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 SPAG16Q8N0X2 631 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 LGI3Q8N145 548 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 EIF4E3Q8N5X7 224 aaKnown RBP2.83□□□□□ -1.96
MCF2-202ENST00000370573 COQ8AQ8NI60 647 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 GPR146Q96CH1 333 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 SEC22AQ96IW7 307 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 HYLS1Q96M11 299 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 OR2A7Q96R45 310 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 S1PR3Q99500 378 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 CHIAQ9BZP6 476 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 ZNF436Q9C0F3 470 aaPredicted RBP2.83□□□□□ -1.96
MCF2-202ENST00000370573 Q9H8V8 135 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 IGHV3-72A0A0B4J1Y9 119 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 IGHV1-3A0A0C4DH29 117 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 A0A1W2PPI3 338 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 SRRM4A7MD48 611 aaKnown RBP2.83□□□□□ -1.96
MCF2-202ENST00000370573 RNF212BA8MTL3 300 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 G3V3Q6 166 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 H0YJW9 148 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 CCL24O00175 119 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 IFNA7P01567 189 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 SERPINE2P07093 398 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 P0C879 139 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 IGHV4-38-2P0DP08 117 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 ANXA3P12429 323 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 HTR1DP28221 377 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 S100GP29377 79 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 SRSF4Q08170 494 aaKnown RBP2.83□□□□□ -1.96
MCF2-202ENST00000370573 GAGE2BQ13066 116 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 CATR1Q13166 79 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 GAGE2EQ4V326 116 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 NMSQ5H8A3 153 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 CLLU1Q5K131 121 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 RUSC1-AS1Q66K80 236 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 CYB5R2Q6BCY4 276 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms