RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 GALNT14Q96FL9 552 aa12.62□□□□□ -0.39
C11orf88-201ENST00000332814 FANCD2OSQ96PS1 177 aa12.62□□□□□ -0.39
C11orf88-201ENST00000332814 ELOVL1Q9BW60 279 aa12.62□□□□□ -0.39
C11orf88-201ENST00000332814 PTTG2Q9NZH5 202 aa12.62□□□□□ -0.39
C11orf88-201ENST00000332814 PKD1L1Q8TDX9 2849 aa12.62□□□□□ -0.39
C11orf88-201ENST00000332814 VWFP04275 2813 aa12.61□□□□□ -0.39
C11orf88-201ENST00000332814 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.61□□□□□ -0.39
C11orf88-201ENST00000332814 SAP30O75446 220 aa12.61□□□□□ -0.39
C11orf88-201ENST00000332814 NDUFB8O95169 186 aa12.61□□□□□ -0.39
C11orf88-201ENST00000332814 HOXA1P49639 335 aaPredicted RBP12.61□□□□□ -0.39
C11orf88-201ENST00000332814 INSL3P51460 131 aa12.61□□□□□ -0.39
C11orf88-201ENST00000332814 CCR6P51684 374 aa12.61□□□□□ -0.39
C11orf88-201ENST00000332814 TMEM187Q14656 261 aa12.61□□□□□ -0.39
C11orf88-201ENST00000332814 LGI3Q8N145 548 aa12.61□□□□□ -0.39
C11orf88-201ENST00000332814 OR4C12Q96R67 309 aa12.61□□□□□ -0.39
C11orf88-201ENST00000332814 SDHCQ99643 169 aaPredicted RBP12.61□□□□□ -0.39
C11orf88-201ENST00000332814 F11RQ9Y624 299 aaKnown RBP12.61□□□□□ -0.39
C11orf88-201ENST00000332814 TMEM56-RWDD3S4R434 201 aa12.61□□□□□ -0.39
C11orf88-201ENST00000332814 ST8SIA3O43173 380 aa12.6□□□□□ -0.39
C11orf88-201ENST00000332814 TRBV12-3P01733 135 aa12.6□□□□□ -0.39
C11orf88-201ENST00000332814 IGHV3-23P01764 117 aa12.6□□□□□ -0.39
C11orf88-201ENST00000332814 PRB2P02812 416 aaPredicted RBP12.6□□□□□ -0.39
C11orf88-201ENST00000332814 P0C879 139 aa12.6□□□□□ -0.39
C11orf88-201ENST00000332814 LHFPL5Q8TAF8 219 aa12.6□□□□□ -0.39
C11orf88-201ENST00000332814 CCDC32Q9BV29 185 aa12.6□□□□□ -0.39
C11orf88-201ENST00000332814 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.6□□□□□ -0.39
C11orf88-201ENST00000332814 PRR13Q9NZ81 148 aa12.6□□□□□ -0.39
C11orf88-201ENST00000332814 S4R3C0 116 aa12.6□□□□□ -0.39
C11orf88-201ENST00000332814 TRBV7-1A0A0A6YYK4 115 aa12.59□□□□□ -0.39
C11orf88-201ENST00000332814 A0A0B4J293 547 aa12.59□□□□□ -0.39
C11orf88-201ENST00000332814 A0A0G2JRQ6 117 aa12.59□□□□□ -0.39
C11orf88-201ENST00000332814 ARL3P36405 182 aa12.59□□□□□ -0.39
C11orf88-201ENST00000332814 SNCAP37840 140 aa12.59□□□□□ -0.39
C11orf88-201ENST00000332814 SYNJ2BPP57105 145 aa12.59□□□□□ -0.39
C11orf88-201ENST00000332814 SPINK9Q5DT21 86 aa12.59□□□□□ -0.39
C11orf88-201ENST00000332814 CLEC19AQ6UXS0 136 aa12.59□□□□□ -0.39
C11orf88-201ENST00000332814 OR2C3Q8N628 320 aa12.59□□□□□ -0.39
C11orf88-201ENST00000332814 CACNG5Q9UF02 275 aa12.59□□□□□ -0.39
C11orf88-201ENST00000332814 CACFD1Q9UGQ2 172 aa12.59□□□□□ -0.39
C11orf88-201ENST00000332814 A0A0B4J2A0 478 aa12.58□□□□□ -0.4
C11orf88-201ENST00000332814 MFSD2BA6NFX1 497 aa12.58□□□□□ -0.4
C11orf88-201ENST00000332814 PPP5D1E7EU14 171 aa12.58□□□□□ -0.4
C11orf88-201ENST00000332814 GGCTO75223 188 aaKnown RBP12.58□□□□□ -0.4
C11orf88-201ENST00000332814 NDUFB6O95139 128 aa12.58□□□□□ -0.4
C11orf88-201ENST00000332814 SULT1A3P0DMM9 295 aa12.58□□□□□ -0.4
C11orf88-201ENST00000332814 SULT1A4P0DMN0 295 aa12.58□□□□□ -0.4
C11orf88-201ENST00000332814 SUB1P53999 127 aaKnown RBP eCLIP12.58□□□□□ -0.4
C11orf88-201ENST00000332814 SUPT4H1P63272 117 aaKnown RBP12.58□□□□□ -0.4
C11orf88-201ENST00000332814 EGFEM1PQ0D2K5 195 aa12.58□□□□□ -0.4
C11orf88-201ENST00000332814 KLK9Q2XQG4 91 aa12.58□□□□□ -0.4
C11orf88-201ENST00000332814 OR1P1Q8NH06 330 aa12.58□□□□□ -0.4
C11orf88-201ENST00000332814 VN1R17PQ8TDU5 208 aa12.58□□□□□ -0.4
C11orf88-201ENST00000332814 GPR146Q96CH1 333 aa12.58□□□□□ -0.4
C11orf88-201ENST00000332814 CCDC140Q96MF4 163 aa12.58□□□□□ -0.4
C11orf88-201ENST00000332814 AURKAIP1Q9NWT8 199 aaPredicted RBP12.58□□□□□ -0.4
C11orf88-201ENST00000332814 PEMTQ9UBM1 199 aa12.58□□□□□ -0.4
C11orf88-201ENST00000332814 SHPKQ9UHJ6 478 aa12.58□□□□□ -0.4
C11orf88-201ENST00000332814 KLK9Q9UKQ9 250 aa12.58□□□□□ -0.4
C11orf88-201ENST00000332814 TNCP24821 2201 aa12.57□□□□□ -0.4
C11orf88-201ENST00000332814 DUXBA0A1W2PPF3 345 aa12.57□□□□□ -0.4
C11orf88-201ENST00000332814 BMPR1BO00238 502 aa12.57□□□□□ -0.4
C11orf88-201ENST00000332814 WIPF1O43516 503 aa12.57□□□□□ -0.4
C11orf88-201ENST00000332814 SPCS3P61009 180 aa12.57□□□□□ -0.4
C11orf88-201ENST00000332814 UBE2MP61081 183 aaKnown RBP12.57□□□□□ -0.4
C11orf88-201ENST00000332814 KLF5Q13887 457 aaPredicted RBP12.57□□□□□ -0.4
C11orf88-201ENST00000332814 PDLIM3Q53GG5 364 aaPredicted RBP12.57□□□□□ -0.4
C11orf88-201ENST00000332814 ACSM6Q6P461 480 aa12.57□□□□□ -0.4
C11orf88-201ENST00000332814 ZNF114Q8NC26 417 aa12.57□□□□□ -0.4
C11orf88-201ENST00000332814 OR9G4Q8NGQ1 327 aa12.57□□□□□ -0.4
C11orf88-201ENST00000332814 MRAPQ8TCY5 172 aa12.57□□□□□ -0.4
C11orf88-201ENST00000332814 MISP3Q96FF7 219 aa12.57□□□□□ -0.4
C11orf88-201ENST00000332814 WDR12Q9GZL7 423 aaKnown RBP12.57□□□□□ -0.4
C11orf88-201ENST00000332814 CEBPZOSA8MTT3 80 aa12.56□□□□□ -0.4
C11orf88-201ENST00000332814 LYRM1O43325 122 aa12.56□□□□□ -0.4
C11orf88-201ENST00000332814 SFT2D2O95562 160 aa12.56□□□□□ -0.4
C11orf88-201ENST00000332814 GPR183P32249 361 aa12.56□□□□□ -0.4
C11orf88-201ENST00000332814 PPP1R1AQ13522 171 aa12.56□□□□□ -0.4
C11orf88-201ENST00000332814 ZNF846Q147U1 533 aa12.56□□□□□ -0.4
C11orf88-201ENST00000332814 LCE2DQ5TA82 110 aaPredicted RBP12.56□□□□□ -0.4
C11orf88-201ENST00000332814 PINX1Q96BK5 328 aaKnown RBP12.56□□□□□ -0.4
C11orf88-201ENST00000332814 C21orf62Q9NYP8 219 aa12.56□□□□□ -0.4
C11orf88-201ENST00000332814 DMRT1Q9Y5R6 373 aa12.56□□□□□ -0.4
C11orf88-201ENST00000332814 IGHV3-21A0A0B4J1V1 117 aa12.55□□□□□ -0.4
C11orf88-201ENST00000332814 LY86O95711 162 aa12.55□□□□□ -0.4
C11orf88-201ENST00000332814 HLA-AP01891 365 aaKnown RBP12.55□□□□□ -0.4
C11orf88-201ENST00000332814 CLEC3BP05452 202 aa12.55□□□□□ -0.4
C11orf88-201ENST00000332814 KRTAP10-11P60412 298 aa12.55□□□□□ -0.4
C11orf88-201ENST00000332814 SMCO1Q147U7 214 aa12.55□□□□□ -0.4
C11orf88-201ENST00000332814 FAM106AQ4KMX7 169 aa12.55□□□□□ -0.4
C11orf88-201ENST00000332814 Q56UQ5 140 aa12.55□□□□□ -0.4
C11orf88-201ENST00000332814 PLET1Q6UQ28 207 aa12.55□□□□□ -0.4
C11orf88-201ENST00000332814 Q6ZRM9 215 aa12.55□□□□□ -0.4
C11orf88-201ENST00000332814 LYZL2Q7Z4W2 148 aa12.55□□□□□ -0.4
C11orf88-201ENST00000332814 UBAC2Q8NBM4 344 aa12.55□□□□□ -0.4
C11orf88-201ENST00000332814 OR52E5Q8NH55 327 aa12.55□□□□□ -0.4
C11orf88-201ENST00000332814 OR1S1Q8NH92 325 aa12.55□□□□□ -0.4
C11orf88-201ENST00000332814 ZNF502Q8TBZ5 544 aa12.55□□□□□ -0.4
C11orf88-201ENST00000332814 HEYLQ9NQ87 328 aaPredicted RBP12.55□□□□□ -0.4
C11orf88-201ENST00000332814 CMYA5Q8N3K9 4069 aa12.55□□□□□ -0.4
C11orf88-201ENST00000332814 INS-IGF2F8WCM5 200 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms