RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 CCL17Q92583 94 aa10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 SGK494Q96LW2 274 aa10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 GNB4Q9HAV0 340 aa10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 IDI2-AS1Q9NZ38 188 aa10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 FAM90A9PA6NNJ1 464 aa10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 TNXAQ16473 311 aa10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 OR52E5Q8NH55 327 aa10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 LAMTOR2Q9Y2Q5 125 aa10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 ZNF324O75467 553 aaPredicted RBP10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 IGHV3-48P01763 117 aa10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 PTPRSQ13332 1948 aa10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 ATP5IP56385 69 aaPredicted RBP10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 NHLH1Q02575 133 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 VWA1Q6PCB0 445 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 YTHDF2Q9Y5A9 579 aaKnown RBP10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 C9JCJ5 164 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 HES1Q14469 280 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 LEMD1Q68G75 181 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 Q6ZPA2 131 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 SLC25A10Q9UBX3 287 aaPredicted RBP10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 METRNQ9UJH8 293 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 ABCA1O95477 2261 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 LEPROTL1O95214 131 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 FAM53AQ6NSI3 398 aaPredicted RBP10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 NPIPB3Q92617 1050 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 YPEL4Q96NS1 127 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 OR8B2Q96RD0 313 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 IFI27L2Q9H2X8 130 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 OR5AL1P0C617 328 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 APELAP0DMC3 54 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 KRTCAP3Q53RY4 240 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 OR4F17Q8NGA8 305 aa10.58□□□□□ -0.72
DNMT3A-202ENST00000321117 CACNA1GO43497 2377 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 C9orf172C9J069 976 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 GFRA3O60609 400 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 BTF3P20290 206 aaKnown RBP10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 MMDQ15546 238 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 KRTAP27-1Q3LI81 207 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 FAM201AQ5SY85 155 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 TMEM108Q6UXF1 575 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 TMEM208Q9BTX3 173 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 TRAV3A0A0B4J244 114 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 IZUMO1RA6ND01 250 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 CA7P43166 264 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 CCL8P80075 99 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 HSPB8Q9UJY1 196 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 IGHV3-21A0A0B4J1V1 117 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 HYPMO75409 117 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 ZNF114Q8NC26 417 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 PRR7Q8TB68 274 aa10.57□□□□□ -0.72
DNMT3A-202ENST00000321117 IGHV2OR16-5A0A0B4J2B6 119 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 FOXA3P55318 350 aaPredicted RBP10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 TBR1Q16650 682 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 OR10J3Q5JRS4 329 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 SSX8Q7RTT4 187 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 CENPVQ7Z7K6 275 aaPredicted RBP10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 FAM122AQ96E09 287 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 ASCL3Q9NQ33 180 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 SAA2-SAA4A0A096LPE2 208 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 LOC102724200A0A096LPH7 203 aaPredicted RBP10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 PRRG2O14669 202 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 SAA2P0DJI9 122 aaPredicted RBP10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 WDR86Q86TI4 376 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 ODF3L1Q8IXM7 274 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 TNFRSF19Q9NS68 423 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 KBTBD11-OT1A0A1B0GTJ5 212 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 A0A1W2PRE2 83 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 FOXH1O75593 365 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 RIGQ13278 110 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 TMEM177Q53S58 311 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 PGLYRP4Q96LB8 373 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 C20orf144Q9BQM9 153 aa10.56□□□□□ -0.72
DNMT3A-202ENST00000321117 HCP5Q6MZN7 132 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 DMRTC2Q8IXT2 367 aaPredicted RBP10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 GRAMD2BQ96HH9 432 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 TMEM70Q9BUB7 260 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 SPRR3Q9UBC9 169 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 PEX7O00628 323 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 CA1P00915 261 aaPredicted RBP10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 ERVK11-1P61568 191 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 RELBQ01201 579 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 SLC25A34Q6PIV7 304 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 TMEM105Q8N8V8 129 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 CDX2Q99626 313 aaPredicted RBP10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 TMEM265A0A087WTH1 108 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 TEX50A0A1B0GTY4 177 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 LGALS4P56470 323 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 C1orf162Q8NEQ5 155 aaPredicted RBP10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 ZNF714Q96N38 554 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 AAMDCQ9H7C9 122 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 RNF24Q9Y225 148 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 LY96Q9Y6Y9 160 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 AHRRA9YTQ3 701 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 NKX2-8O15522 239 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 MLNRO43193 412 aa10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 SS18L1O75177 396 aaPredicted RBP10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 YPEL3P61236 119 aaPredicted RBP10.55□□□□□ -0.72
DNMT3A-202ENST00000321117 EML6Q6ZMW3 1958 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms