RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 COX5AP20674 150 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 FGF7P21781 194 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 IGHV1-2P23083 117 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 GPX4P36969 197 aaPredicted RBP4□□□□□ -1.77
CKS1B-201ENST00000308987 SRP14P37108 136 aaKnown RBP4□□□□□ -1.77
CKS1B-201ENST00000308987 PDLIM4P50479 330 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 FAM3BP58499 235 aaPredicted RBP4□□□□□ -1.77
CKS1B-201ENST00000308987 RAB4BP61018 213 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 ERVK11-1P61568 191 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 LCN2P80188 198 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 MEF2BQ02080 365 aaPredicted RBP4□□□□□ -1.77
CKS1B-201ENST00000308987 SLC38A11Q08AI6 406 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 CATR1Q13166 79 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 ZNF146Q15072 292 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 ZNF726P1Q15940 193 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 SSX2Q16385 188 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 GABRA6Q16445 453 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 VWC2Q2TAL6 325 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 BSXQ3C1V8 233 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 ACOT6Q3I5F7 207 aaPredicted RBP4□□□□□ -1.77
CKS1B-201ENST00000308987 AARDQ4LEZ3 155 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 ZNF585BQ52M93 769 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 FAM120AOSQ5T036 256 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 NCR3LG1Q68D85 454 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 ZNF343Q6P1L6 599 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 OR51G1Q8NGK1 321 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 OR51H1Q8NH63 302 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 RNASE11Q8TAA1 199 aaKnown RBP4□□□□□ -1.77
CKS1B-201ENST00000308987 TMEM170AQ8WVE7 144 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 FRZBQ92765 325 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 LHX4Q969G2 390 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 OR5B12Q96R08 314 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 OR4C12Q96R67 309 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 SMIM7Q9BQ49 75 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 RTL8AQ9BWD3 113 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 GPR61Q9BZJ8 451 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 MAP1LC3BQ9GZQ8 125 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 ZNF665Q9H7R5 613 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 CTNNBIP1Q9NSA3 81 aaPredicted RBP4□□□□□ -1.77
CKS1B-201ENST00000308987 KCNIP1Q9NZI2 227 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 CACNG5Q9UF02 275 aa4□□□□□ -1.77
CKS1B-201ENST00000308987 TRAV9-1A0A075B6T8 112 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 TMEM210A6NLX4 147 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 ZFP92A6NM28 416 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 PPP5D1E7EU14 171 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 C17orf112F2Z3M2 114 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 F6UZH7 168 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 RAB29O14966 203 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 SYNGR1O43759 233 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 PDE6DO43924 150 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 MPDU1O75352 247 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 HRASP01112 189 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 IGHV3-9P01782 118 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 HLA-HP01893 362 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 PGA5P0DJD9 388 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 SRD5A1P18405 259 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 MDKP21741 143 aaPredicted RBP3.99□□□□□ -1.77
CKS1B-201ENST00000308987 DDTP30046 118 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 IL2RGP31785 369 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 CEBPGP53567 150 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 RPL23P62829 140 aaKnown RBP3.99□□□□□ -1.77
CKS1B-201ENST00000308987 GNB2P62879 340 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 PAX5Q02548 391 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 TNFRSF9Q07011 255 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 ARL16Q0P5N6 197 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 TMEM267Q0VDI3 215 aaPredicted RBP3.99□□□□□ -1.77
CKS1B-201ENST00000308987 HNF4GQ14541 408 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 CD300EQ496F6 205 aaPredicted RBP3.99□□□□□ -1.77
CKS1B-201ENST00000308987 CYB5R2Q6BCY4 276 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 KCNIP4Q6PIL6 250 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 TRAT1Q6PIZ9 186 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 FIP1L1Q6UN15 594 aaKnown RBP3.99□□□□□ -1.77
CKS1B-201ENST00000308987 LCN15Q6UWW0 184 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 ZNF66Q6ZN08 573 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 Q6ZT83 130 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 MRPL52Q86TS9 123 aaKnown RBP3.99□□□□□ -1.77
CKS1B-201ENST00000308987 HAPLN4Q86UW8 402 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 FGFRL1Q8N441 504 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 RPP25LQ8N5L8 163 aaKnown RBP3.99□□□□□ -1.77
CKS1B-201ENST00000308987 ZNF645Q8N7E2 425 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 OR1P1Q8NH06 330 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 OR4X1Q8NH49 305 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 DPF1Q92782 380 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 BCL2L2Q92843 193 aaPredicted RBP3.99□□□□□ -1.77
CKS1B-201ENST00000308987 RAB1CQ92928 201 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 APH1AQ96BI3 265 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 PACRGQ96M98 296 aaPredicted RBP3.99□□□□□ -1.77
CKS1B-201ENST00000308987 HIST1H2BLQ99880 126 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 C2orf88Q9BSF0 95 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 RSG1Q9BU20 258 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 CBLN4Q9NTU7 201 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 SLC25A15Q9Y619 301 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 RFNGQ9Y644 331 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 URGCP-MRPS24S4R325 110 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 RYR3Q15413 4870 aa3.99□□□□□ -1.77
CKS1B-201ENST00000308987 TMEM30CPA0ZSE6 113 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 OOEPA6NGQ2 149 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 LRRC30A6NM36 301 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 LINC00473A8K010 186 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 PMS2P5A8MQ11 134 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms