RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 TSKUQ8WUA8 353 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 IFI27L1Q96BM0 104 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 TNRC6BQ9UPQ9 1833 aaKnown RBP4.16□□□□□ -1.74
CSMD3-201ENST00000297405 A0A0A6YYC8 382 aaPredicted RBP4.16□□□□□ -1.74
CSMD3-201ENST00000297405 I3L1I5 382 aaPredicted RBP4.16□□□□□ -1.74
CSMD3-201ENST00000297405 APOBEC3AP31941 199 aaPredicted RBP4.16□□□□□ -1.74
CSMD3-201ENST00000297405 SEC13P55735 322 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 MORN2Q502X0 79 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 GOLT1AQ6ZVE7 132 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 WNT10AQ9GZT5 417 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 C5orf66Q9H5L9 145 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 LOC105371242A0A075B767 164 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 PPIAL4CA0A0B4J2A2 164 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 TRBV5-5A0A0J9YX44 114 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 FOXH1O75593 365 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 PPIAL4GP0DN37 164 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 FGF12P61328 243 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 RTN4RL2Q86UN3 420 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 TRBV5-3A0A0A0MS03 114 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 C1QAP02745 245 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 KLK2P20151 261 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 CXCL5P42830 114 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 LYZL2Q7Z4W2 148 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 SSMEM1Q8WWF3 244 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 LEPROTO15243 131 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 SLAQ13239 276 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 FAM90A2PQ658T7 463 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 OR11H6Q8NGC7 330 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 HES7Q9BYE0 225 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 MRM2Q9UI43 246 aaKnown RBP4.16□□□□□ -1.74
CSMD3-201ENST00000297405 EPDR1Q9UM22 224 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 CEP295Q9C0D2 2601 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 TM4SF20Q53R12 229 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 OR4C3Q8NH37 302 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 ZNF688P0C7X2 276 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 P2RY2P41231 377 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 RND2P52198 227 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 MBNL2Q5VZF2 373 aaKnown RBP4.15□□□□□ -1.74
CSMD3-201ENST00000297405 ZNF841Q6ZN19 808 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 GCSAMQ8N6F7 178 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 IGFLR1Q9H665 355 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 REG1BP48304 166 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 COL10A1Q03692 680 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 UNQ9370/PRO34162Q6UXP9 181 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 FGF11Q92914 225 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 SLC25A38Q96DW6 304 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 SIGLEC8Q9NYZ4 499 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 MOSP00540 346 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 IL11P20809 199 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 LINC01551Q86U37 167 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 LHX9Q9NQ69 397 aa4.15□□□□□ -1.74
CSMD3-201ENST00000297405 TM4SF5O14894 197 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 GPX1P07203 203 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 AZU1P20160 251 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 UCP1P25874 307 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 KLRD1Q13241 179 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 TP53INP2Q8IXH6 220 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 GLMPQ8WWB7 406 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 C1QTNF4Q9BXJ3 329 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 WTIPA6NIX2 430 aaPredicted RBP4.15□□□□□ -1.75
CSMD3-201ENST00000297405 PDE6GP18545 87 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 TMEM52BQ4KMG9 183 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 KRTCAP3Q53RY4 240 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 UNQ5815/PRO19632Q6UWF5 114 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 ABHD14AQ9BUJ0 271 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 ONECUT1Q9UBC0 465 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 PEX7O00628 323 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 TIMP1P01033 207 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 SBK3P0C264 359 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 SHISA9B4DS77 424 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 SYS1-DBNDD2H3BUS1 97 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 APOHP02749 345 aaPredicted RBP4.15□□□□□ -1.75
CSMD3-201ENST00000297405 MRPS11P82912 194 aaKnown RBP4.15□□□□□ -1.75
CSMD3-201ENST00000297405 VHLLQ6RSH7 139 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 BCDIN3DQ7Z5W3 292 aaKnown RBP4.15□□□□□ -1.75
CSMD3-201ENST00000297405 GDF15Q99988 308 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 hCG_38984A0A1B0GV85 526 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 SYNGR3O43761 229 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 FAM106CPP0CH98 169 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 VSIG10L2P0DP72 767 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 RUNX3Q13761 415 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 FAM106AQ4KMX7 169 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 IER5LQ5T953 404 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 ADAMTSL5Q6ZMM2 481 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 J3QT63 122 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 K7EP34 96 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 RTP5Q14D33 572 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 FAM90A1Q86YD7 464 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 SLC25A39Q9BZJ4 359 aaPredicted RBP4.15□□□□□ -1.75
CSMD3-201ENST00000297405 INSIG2Q9Y5U4 225 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 WNT6Q9Y6F9 365 aa4.15□□□□□ -1.75
CSMD3-201ENST00000297405 LYPD1Q8N2G4 141 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 KLK6Q92876 244 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 CX3CL1P78423 397 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 KIRREL2Q6UWL6 708 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 GRIFINA4D1Z8 144 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 F12P00748 615 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-201ENST00000297405 ALKBH6Q3KRA9 238 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 DTX2Q86UW9 622 aa4.14□□□□□ -1.75
CSMD3-201ENST00000297405 PPIL1Q9Y3C6 166 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms