RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 REG4Q9BYZ8 158 aa13.91□□□□□ -0.18
PHRF1-201ENST00000264555 CCL20P78556 96 aa13.9□□□□□ -0.18
PHRF1-201ENST00000264555 MIR17HGQ75NE6 70 aa13.9□□□□□ -0.18
PHRF1-201ENST00000264555 DOCK9Q9BZ29 2069 aa13.9□□□□□ -0.18
PHRF1-201ENST00000264555 IGKV1D-33P01593 117 aa13.9□□□□□ -0.18
PHRF1-201ENST00000264555 IGKV1-33P01594 117 aa13.9□□□□□ -0.18
PHRF1-201ENST00000264555 ATP5G2Q06055 141 aa13.9□□□□□ -0.18
PHRF1-201ENST00000264555 WDR83OSQ9Y284 106 aa13.9□□□□□ -0.18
PHRF1-201ENST00000264555 WFDC3Q8IUB2 231 aa13.9□□□□□ -0.18
PHRF1-201ENST00000264555 OR10J6PQ8NGY7 276 aa13.9□□□□□ -0.18
PHRF1-201ENST00000264555 RPUSD1Q9UJJ7 312 aaKnown RBP13.9□□□□□ -0.18
PHRF1-201ENST00000264555 ANAPC10Q9UM13 185 aa13.9□□□□□ -0.18
PHRF1-201ENST00000264555 LOC105371267A0A1B0GV96 52 aa13.9□□□□□ -0.18
PHRF1-201ENST00000264555 RPS20P60866 119 aaKnown RBP13.9□□□□□ -0.18
PHRF1-201ENST00000264555 PRCDQ00LT1 54 aa13.9□□□□□ -0.18
PHRF1-201ENST00000264555 GOLT1AQ6ZVE7 132 aa13.9□□□□□ -0.18
PHRF1-201ENST00000264555 SGK494Q96LW2 274 aa13.9□□□□□ -0.18
PHRF1-201ENST00000264555 SPTBN2O15020 2390 aa13.9□□□□□ -0.19
PHRF1-201ENST00000264555 IGKV1-5P01602 117 aa13.89□□□□□ -0.19
PHRF1-201ENST00000264555 MAS1LP35410 378 aa13.89□□□□□ -0.19
PHRF1-201ENST00000264555 PHF3Q92576 2039 aaKnown RBP13.89□□□□□ -0.19
PHRF1-201ENST00000264555 FAM169BQ8N8A8 192 aa13.89□□□□□ -0.19
PHRF1-201ENST00000264555 EEF1AKMT3Q96AZ1 226 aa13.89□□□□□ -0.19
PHRF1-201ENST00000264555 IL36BQ9NZH7 164 aa13.89□□□□□ -0.19
PHRF1-201ENST00000264555 SRSF6Q13247 344 aaKnown RBP13.89□□□□□ -0.19
PHRF1-201ENST00000264555 Q6ZS92 163 aa13.89□□□□□ -0.19
PHRF1-201ENST00000264555 OR4C5Q8NGB2 326 aa13.89□□□□□ -0.19
PHRF1-201ENST00000264555 SRSF12Q8WXF0 261 aaKnown RBP13.89□□□□□ -0.19
PHRF1-201ENST00000264555 RAXQ9Y2V3 346 aa13.89□□□□□ -0.19
PHRF1-201ENST00000264555 IGKV3-15P01624 115 aa13.89□□□□□ -0.19
PHRF1-201ENST00000264555 SRIP30626 198 aa13.89□□□□□ -0.19
PHRF1-201ENST00000264555 TMEM183AQ8IXX5 376 aa13.89□□□□□ -0.19
PHRF1-201ENST00000264555 CCL19Q99731 98 aa13.89□□□□□ -0.19
PHRF1-201ENST00000264555 RPL23P62829 140 aaKnown RBP13.88□□□□□ -0.19
PHRF1-201ENST00000264555 RELQ04864 619 aaPredicted RBP13.88□□□□□ -0.19
PHRF1-201ENST00000264555 C5orf24Q7Z6I8 188 aa13.88□□□□□ -0.19
PHRF1-201ENST00000264555 OR8A1Q8NGG7 326 aa13.88□□□□□ -0.19
PHRF1-201ENST00000264555 GATA2P23769 480 aaPredicted RBP13.88□□□□□ -0.19
PHRF1-201ENST00000264555 TBR1Q16650 682 aa13.88□□□□□ -0.19
PHRF1-201ENST00000264555 SLC25A33Q9BSK2 321 aa13.88□□□□□ -0.19
PHRF1-201ENST00000264555 CBLN4Q9NTU7 201 aa13.88□□□□□ -0.19
PHRF1-201ENST00000264555 DENND4CQ5VZ89 1909 aa13.88□□□□□ -0.19
PHRF1-201ENST00000264555 ZNF738Q8NE65 137 aa13.88□□□□□ -0.19
PHRF1-201ENST00000264555 PEX7O00628 323 aa13.87□□□□□ -0.19
PHRF1-201ENST00000264555 METRNQ9UJH8 293 aa13.87□□□□□ -0.19
PHRF1-201ENST00000264555 RIF1Q5UIP0 2472 aaKnown RBP13.87□□□□□ -0.19
PHRF1-201ENST00000264555 TRAV1-1A0A0B4J248 108 aa13.87□□□□□ -0.19
PHRF1-201ENST00000264555 MLNRO43193 412 aa13.87□□□□□ -0.19
PHRF1-201ENST00000264555 MGPP08493 103 aa13.87□□□□□ -0.19
PHRF1-201ENST00000264555 A0A1B0GW64 132 aa13.87□□□□□ -0.19
PHRF1-201ENST00000264555 NPPCP23582 126 aa13.87□□□□□ -0.19
PHRF1-201ENST00000264555 MYOZ3Q8TDC0 251 aa13.87□□□□□ -0.19
PHRF1-201ENST00000264555 TNFRSF14Q92956 283 aa13.87□□□□□ -0.19
PHRF1-201ENST00000264555 LOC389332A0A1B0GUA5 103 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 CBLN1P23435 193 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 NUP37Q8NFH4 326 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 VSIRQ9H7M9 311 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 SELLP14151 372 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 HERPUD1Q15011 391 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 KIAA1644Q3SXP7 199 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 TEX45Q8NA69 505 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 CD99P14209 185 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 PLA2G2CQ5R387 149 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 COQ2Q96H96 371 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 FOXA2Q9Y261 457 aaPredicted RBP13.86□□□□□ -0.19
PHRF1-201ENST00000264555 TCAPO15273 167 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 CKS2P33552 79 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 CD69Q07108 199 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 HEPN1Q6WQI6 88 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 ZMAT5Q9UDW3 170 aaKnown RBP13.86□□□□□ -0.19
PHRF1-201ENST00000264555 ZNF257Q9Y2Q1 563 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 TRAV9-1A0A075B6T8 112 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 GRIFINA4D1Z8 144 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 TAS2R60P59551 318 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 SAPCD1Q5SSQ6 148 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 TMEM14EPQ6UXP3 125 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 C20orf204Q6ZNR8 217 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 ARPC1AQ92747 370 aa13.86□□□□□ -0.19
PHRF1-201ENST00000264555 SLC17A3O00476 420 aa13.85□□□□□ -0.19
PHRF1-201ENST00000264555 WNT10AQ9GZT5 417 aa13.85□□□□□ -0.19
PHRF1-201ENST00000264555 C21orf62Q9NYP8 219 aa13.85□□□□□ -0.19
PHRF1-201ENST00000264555 PMCHL1Q16048 86 aa13.85□□□□□ -0.19
PHRF1-201ENST00000264555 LY6EQ16553 131 aa13.85□□□□□ -0.19
PHRF1-201ENST00000264555 TM4SF20Q53R12 229 aa13.85□□□□□ -0.19
PHRF1-201ENST00000264555 OR4B1Q8NGF8 309 aa13.85□□□□□ -0.19
PHRF1-201ENST00000264555 ICE1Q9Y2F5 2266 aa13.85□□□□□ -0.19
PHRF1-201ENST00000264555 RELBQ01201 579 aa13.85□□□□□ -0.19
PHRF1-201ENST00000264555 FAM106AQ4KMX7 169 aa13.85□□□□□ -0.19
PHRF1-201ENST00000264555 PPP1R27Q86WC6 154 aa13.85□□□□□ -0.19
PHRF1-201ENST00000264555 DYNLRB2Q8TF09 96 aa13.85□□□□□ -0.19
PHRF1-201ENST00000264555 CGB1A6NKQ9 187 aa13.85□□□□□ -0.19
PHRF1-201ENST00000264555 NBR2O15453 112 aa13.85□□□□□ -0.19
PHRF1-201ENST00000264555 RSPO1Q2MKA7 263 aaPredicted RBP13.85□□□□□ -0.19
PHRF1-201ENST00000264555 WFIKKN1Q96NZ8 548 aa13.85□□□□□ -0.19
PHRF1-201ENST00000264555 KIAA1671Q9BY89 1806 aa13.84□□□□□ -0.19
PHRF1-201ENST00000264555 DLX6P56179 175 aa13.84□□□□□ -0.19
PHRF1-201ENST00000264555 COTL1Q14019 142 aa13.84□□□□□ -0.19
PHRF1-201ENST00000264555 HS3ST6Q96QI5 342 aa13.84□□□□□ -0.19
PHRF1-201ENST00000264555 FBXL7Q9UJT9 491 aa13.84□□□□□ -0.19
PHRF1-201ENST00000264555 HBBP68871 147 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms