RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 UXS1Q8NBZ7 420 aa10.99□□□□□ -0.65
VPS25-201ENST00000253794 OR1P1Q8NH06 330 aa10.99□□□□□ -0.65
VPS25-201ENST00000253794 C2orf50Q96LR7 162 aa10.99□□□□□ -0.65
VPS25-201ENST00000253794 FANCD2OSQ96PS1 177 aa10.99□□□□□ -0.65
VPS25-201ENST00000253794 KLK15Q9H2R5 256 aa10.99□□□□□ -0.65
VPS25-201ENST00000253794 FAM223BA6NKX1 122 aa10.98□□□□□ -0.65
VPS25-201ENST00000253794 MED6O75586 246 aa10.98□□□□□ -0.65
VPS25-201ENST00000253794 RPLP1P05386 114 aaKnown RBP10.98□□□□□ -0.65
VPS25-201ENST00000253794 NKX2-1P43699 371 aaPredicted RBP10.98□□□□□ -0.65
VPS25-201ENST00000253794 CDX1P47902 265 aaPredicted RBP10.98□□□□□ -0.65
VPS25-201ENST00000253794 ATP5IP56385 69 aaPredicted RBP10.98□□□□□ -0.65
VPS25-201ENST00000253794 TMEM65Q6PI78 240 aa10.98□□□□□ -0.65
VPS25-201ENST00000253794 SHISA2Q6UWI4 295 aa10.98□□□□□ -0.65
VPS25-201ENST00000253794 FAM223AQ8IWN6 122 aa10.98□□□□□ -0.65
VPS25-201ENST00000253794 ZNF491Q8N8L2 437 aa10.98□□□□□ -0.65
VPS25-201ENST00000253794 SPATA3Q8NHX4 192 aa10.98□□□□□ -0.65
VPS25-201ENST00000253794 DTD1Q8TEA8 209 aa10.98□□□□□ -0.65
VPS25-201ENST00000253794 UBE2E2Q96LR5 201 aa10.98□□□□□ -0.65
VPS25-201ENST00000253794 P2RX4Q99571 388 aa10.98□□□□□ -0.65
VPS25-201ENST00000253794 CITED2Q99967 270 aaPredicted RBP10.98□□□□□ -0.65
VPS25-201ENST00000253794 RBKSQ9H477 322 aa10.98□□□□□ -0.65
VPS25-201ENST00000253794 DMRT1Q9Y5R6 373 aa10.98□□□□□ -0.65
VPS25-201ENST00000253794 TSSC4Q9Y5U2 329 aaPredicted RBP10.98□□□□□ -0.65
VPS25-201ENST00000253794 C13orf42A0A1B0GVH6 325 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 C5orf51A6NDU8 294 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 CEBPZOSA8MTT3 80 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 ADARB2-AS1A8MUL3 147 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 GOSR2O14653 212 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 CYB5BO43169 146 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 SYNGR2O43760 224 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 REG1AP05451 166 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 RNASE2P10153 161 aaKnown RBP10.97□□□□□ -0.65
VPS25-201ENST00000253794 PF4V1P10720 104 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 HTR2BP41595 481 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 MFAP2P55001 183 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 H2BFSP57053 126 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 RPL23AP62750 156 aaKnown RBP10.97□□□□□ -0.65
VPS25-201ENST00000253794 CYCSP99999 105 aaKnown RBP10.97□□□□□ -0.65
VPS25-201ENST00000253794 RUNX1Q01196 453 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 SPINK9Q5DT21 86 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 NDUFA11Q86Y39 141 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 C3orf56Q8N813 242 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 NECAP1Q8NC96 275 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 USMG5Q96IX5 58 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 CIB3Q96Q77 187 aaPredicted RBP10.97□□□□□ -0.65
VPS25-201ENST00000253794 NMES1Q9C002 83 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 ENY2Q9NPA8 101 aa10.97□□□□□ -0.65
VPS25-201ENST00000253794 DNHD1Q96M86 4753 aa10.96□□□□□ -0.65
VPS25-201ENST00000253794 A0A0G2JLM5 398 aa10.96□□□□□ -0.65
VPS25-201ENST00000253794 TCRBV4S1A1TA0A5B7 111 aa10.96□□□□□ -0.65
VPS25-201ENST00000253794 MBPP02686 304 aaPredicted RBP10.96□□□□□ -0.65
VPS25-201ENST00000253794 TRGV3P03979 118 aa10.96□□□□□ -0.65
VPS25-201ENST00000253794 C2orf83Q53S99 150 aa10.96□□□□□ -0.65
VPS25-201ENST00000253794 Q6ZNX1 250 aa10.96□□□□□ -0.65
VPS25-201ENST00000253794 C19orf35Q6ZS72 473 aa10.96□□□□□ -0.65
VPS25-201ENST00000253794 ASB13Q8WXK3 278 aa10.96□□□□□ -0.65
VPS25-201ENST00000253794 HIPK2Q9H2X6 1198 aa10.96□□□□□ -0.65
VPS25-201ENST00000253794 HEYLQ9NQ87 328 aaPredicted RBP10.96□□□□□ -0.65
VPS25-201ENST00000253794 U3KQ87 197 aa10.96□□□□□ -0.65
VPS25-201ENST00000253794 FAM25EA8MYX2 175 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 NXPH3O95157 252 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 PRH1P02810 166 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 DEFA4P12838 97 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 SNCAP37840 140 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 SUB1P53999 127 aaKnown RBP eCLIP10.95□□□□□ -0.66
VPS25-201ENST00000253794 TPPP2P59282 170 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 TAS2R30P59541 319 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 RRAS2P62070 204 aaPredicted RBP10.95□□□□□ -0.66
VPS25-201ENST00000253794 RHOGP84095 191 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 LCNL1Q6ZST4 164 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 SLC24A4Q8NFF2 622 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 TMEM170AQ8WVE7 144 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 C4orf3Q8WVX3 66 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 MS4A10Q96PG2 267 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 ATP6V0BQ99437 205 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 MED28Q9H204 178 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 C11orf1Q9H5F2 150 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 THYN1Q9P016 225 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 GSKIPQ9P0R6 139 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 MGAT4CQ9UBM8 478 aa10.95□□□□□ -0.66
VPS25-201ENST00000253794 RCL1Q9Y2P8 373 aaKnown RBP10.95□□□□□ -0.66
VPS25-201ENST00000253794 I3L521 148 aa10.94□□□□□ -0.66
VPS25-201ENST00000253794 CORTO00230 105 aa10.94□□□□□ -0.66
VPS25-201ENST00000253794 CXCL3P19876 107 aa10.94□□□□□ -0.66
VPS25-201ENST00000253794 POLR2GP62487 172 aaKnown RBP eCLIP10.94□□□□□ -0.66
VPS25-201ENST00000253794 FCN2Q15485 313 aa10.94□□□□□ -0.66
VPS25-201ENST00000253794 FAM209BQ5JX69 171 aa10.94□□□□□ -0.66
VPS25-201ENST00000253794 NOXA1Q86UR1 476 aa10.94□□□□□ -0.66
VPS25-201ENST00000253794 C11orf44Q8N8P7 122 aa10.94□□□□□ -0.66
VPS25-201ENST00000253794 OR11H7Q8NGC8 314 aa10.94□□□□□ -0.66
VPS25-201ENST00000253794 VN1R17PQ8TDU5 208 aa10.94□□□□□ -0.66
VPS25-201ENST00000253794 SMIM8Q96KF7 97 aa10.94□□□□□ -0.66
VPS25-201ENST00000253794 RAB40CQ96S21 281 aa10.94□□□□□ -0.66
VPS25-201ENST00000253794 MAGT1Q9H0U3 335 aa10.94□□□□□ -0.66
VPS25-201ENST00000253794 ZNF355PQ9NSJ1 428 aa10.94□□□□□ -0.66
VPS25-201ENST00000253794 I3L2K1 104 aa10.93□□□□□ -0.66
VPS25-201ENST00000253794 K7EIM0 57 aa10.93□□□□□ -0.66
VPS25-201ENST00000253794 K7EPK0 472 aa10.93□□□□□ -0.66
VPS25-201ENST00000253794 OR2J3O76001 311 aa10.93□□□□□ -0.66
VPS25-201ENST00000253794 NDUFB8O95169 186 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms