RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 LCN12Q6JVE5 192 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 DEFB124Q8NES8 71 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 OR4C5Q8NGB2 326 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 LRFN3Q9BTN0 628 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 TPPP3Q9BW30 176 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 GGTLC1Q9BX51 225 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 DCAF16Q9NXF7 216 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 FAM215AQ9Y5M1 114 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 F2RL2O00254 374 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 ADH4P08319 380 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 CCKARP32238 428 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 CT45A1Q5HYN5 189 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 RNASEKQ6P5S7 137 aaKnown RBP8.31□□□□□ -1.08
COPB1-201ENST00000249923 LHFPL4Q7Z7J7 247 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 MOGAT3Q86VF5 341 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 CT45A3Q8NHU0 189 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 LSM4Q9Y4Z0 139 aaKnown RBP8.31□□□□□ -1.08
COPB1-201ENST00000249923 PLXNB1O43157 2135 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 SNAI2O43623 268 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 APELAP0DMC3 54 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 HOXC12P31275 282 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 ZNF83P51522 516 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 BHLHA15Q7RTS1 189 aaPredicted RBP8.31□□□□□ -1.08
COPB1-201ENST00000249923 TCTEX1D1Q8N7M0 179 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 FAM216AQ8WUB2 273 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 TMEM140Q9NV12 185 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 ACACAQ13085 2346 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 DLEU1O43261 78 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 SPINT2O43291 252 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 YPEL1O60688 119 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 GGCTO75223 188 aaKnown RBP8.3□□□□□ -1.08
COPB1-201ENST00000249923 FCN3O75636 299 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 FTH1P19P0C7X4 201 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 TDGF1P3P51864 188 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 ACTL10Q5JWF8 245 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 YPEL2Q96QA6 119 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 MCRIP2Q9BUT9 160 aaKnown RBP8.3□□□□□ -1.08
COPB1-201ENST00000249923 SEPSECSQ9HD40 501 aaKnown RBP8.3□□□□□ -1.08
COPB1-201ENST00000249923 NOTCH3Q9UM47 2321 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 CUL9Q8IWT3 2517 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 SAA2-SAA4A0A096LPE2 208 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 K7EM74 188 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 HSBP1O75506 76 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 SAA2P0DJI9 122 aaPredicted RBP8.3□□□□□ -1.08
COPB1-201ENST00000249923 TMPRSS3P57727 454 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 UNQ5815/PRO19632Q6UWF5 114 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 MOB3BQ86TA1 216 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 ZCCHC14Q8WYQ9 949 aaKnown RBP8.3□□□□□ -1.08
COPB1-201ENST00000249923 JPT1Q9UK76 154 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 YTHDF2Q9Y5A9 579 aaKnown RBP8.3□□□□□ -1.08
COPB1-201ENST00000249923 PLAUP00749 431 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 CSN3P07498 182 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 OR5G3P0C626 314 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 PAX1P15863 534 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 COA6Q5JTJ3 125 aaKnown RBP8.3□□□□□ -1.08
COPB1-201ENST00000249923 TMEM144Q7Z5S9 345 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 ZNF596Q8TC21 504 aa8.3□□□□□ -1.08
COPB1-201ENST00000249923 FOXH1O75593 365 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 CFHR2P36980 270 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 PDLIM4P50479 330 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 HLA-DRB5Q30154 266 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 TRAT1Q6PIZ9 186 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 GBGT1Q8N5D6 347 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 RAB1CQ92928 201 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 ACY3Q96HD9 319 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 SFRP2Q96HF1 295 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 RNASE7Q9H1E1 156 aaKnown RBP8.29□□□□□ -1.08
COPB1-201ENST00000249923 CALYQ9NYX4 217 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 MBD3L4A6NDZ8 208 aaPredicted RBP8.29□□□□□ -1.08
COPB1-201ENST00000249923 MBD3L3A6NE82 208 aaPredicted RBP8.29□□□□□ -1.08
COPB1-201ENST00000249923 MBD3L5A6NJ08 208 aaPredicted RBP8.29□□□□□ -1.08
COPB1-201ENST00000249923 MGST3O14880 152 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 SPRY3O43610 288 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 RAB4AP20338 218 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 SRIP30626 198 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 RPL15P61313 204 aaKnown RBP8.29□□□□□ -1.08
COPB1-201ENST00000249923 ERVK-16P61578 105 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 RPL31P62899 125 aaKnown RBP8.29□□□□□ -1.08
COPB1-201ENST00000249923 PSG5Q15238 335 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 MBD3L2Q8NHZ7 208 aaPredicted RBP8.29□□□□□ -1.08
COPB1-201ENST00000249923 ITLN1Q8WWA0 313 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 ANAPC16Q96DE5 110 aa8.29□□□□□ -1.08
COPB1-201ENST00000249923 TBL2Q9Y4P3 447 aaKnown RBP8.29□□□□□ -1.08
COPB1-201ENST00000249923 YLPM1P49750 1951 aaKnown RBP8.29□□□□□ -1.08
COPB1-201ENST00000249923 TRAV17A0A0B4J275 112 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 H3BTX0 84 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 TMPRSS2O15393 492 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 APOA2P02652 100 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 GPR6P46095 362 aaPredicted RBP8.28□□□□□ -1.08
COPB1-201ENST00000249923 DEFB109BQ30KR1 87 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 PQLC2Q6ZP29 291 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 CISD2Q8N5K1 135 aaKnown RBP8.28□□□□□ -1.08
COPB1-201ENST00000249923 OCC1Q8TAD7 63 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 PMCHL2Q9BQD1 86 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 TMEM106BQ9NUM4 274 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 PROCRQ9UNN8 238 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 TCF19Q9Y242 345 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 IGKV1OR2-108A0A075B7D4 117 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 K7EN84 100 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 M0R1B8 84 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 325.9 ms