RNA–Protein interactions for RNA: ENSMUST00000046207.8

Sf3b6-201, Transcript of Splicing factor 3B subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b6, Length 1,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6-201ENSMUST00000046207 Gm826Q3UQ74 109 aa11.92□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Gm815Q3UWS2 115 aa11.92□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Gm10912Q3UXH0 145 aa11.92□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Dio1Q61153 257 aa11.92□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Ypel2Q65Z95 119 aa11.92□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Kctd9Q80UN1 339 aa11.92□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Enpp5Q9EQG7 477 aa11.92□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Ypel1Q9ESC7 118 aa11.92□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Ramp2Q9WUP0 189 aa11.92□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Ankrd29D3YVV3 309 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Tspan15F7BWT7 294 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Olfr893K7N678 312 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 IfnabL7MTU6 190 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Ins2P01326 110 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Fgf2P15655 154 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Mmp9P41245 730 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Pate4Q09098 99 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Ccl12Q62401 104 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Scgb1c1Q7M742 95 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 AcppQ8CE08 381 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Olfr1457Q8VFK3 317 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Olfr355Q8VFP6 310 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Sntg1Q925E1 517 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Med21Q9CQ39 144 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Tex12Q9CR81 123 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Shisa9Q9CZN4 424 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Aig1Q9D8B1 262 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Znf580Q9DB38 172 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Hsd17b6Q9R092 317 aa11.91□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Gm15293D3YX02 93 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Npffr1E9Q468 432 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Gm6594J3QM43 95 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Gm20918J3QN17 227 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Spsb2O88838 264 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 PrkacaP05132 351 aaKnown RBP11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Il4P07750 140 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Pdcd6P12815 191 aaKnown RBP11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Slc35b1P97858 322 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Rsu1Q01730 277 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Gdf3Q07104 366 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Hddc2Q3SXD3 199 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Cd52Q64389 74 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Fbxw26Q8BI58 466 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Tnfaip8Q921Z5 198 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 CsprsQ99388 208 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Ucn2Q99ML8 113 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Atg12Q9CQY1 141 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 UrahQ9CRB3 118 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 CrygfQ9CXV3 174 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Ebag9Q9D0V7 213 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Stra6lQ9DBN1 621 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Rab9aQ9R0M6 201 aa11.9□□□□□ -0.5
Sf3b6-201ENSMUST00000046207 Ighv1-18A0A0A6YXN4 117 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Ube2ql1A0PJN4 161 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Hacd4A2AKM2 232 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Olfr102B2RT33 308 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Olfr1496B9EHG2 317 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Tnfsf12O54907 249 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 P01812 117 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Saa2P05367 122 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Prkar1bP12849 381 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Gnb1P62874 340 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Ppp1ccP63087 323 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Olfr1362Q5SZZ8 308 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Fbxo27Q6DIA9 280 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Usmg5Q78IK2 58 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Olfr1477Q7TQQ7 315 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Olfr657Q7TRP7 319 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Olfr429Q7TRW1 312 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Lcn10Q810Z1 182 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 St3gal6Q8VIB3 329 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Necap2Q9D1J1 266 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 1700025F22RikQ9D9Y7 111 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 PerpQ9JK95 193 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Hnf4gQ9WUU6 408 aa11.89□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Trav5-4A0A075B652 114 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Gm21854A0A087WNM4 232 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Skint2A7XUX6 400 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 BC035044E0CXF8 138 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Gm10251J3QPM5 127 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Hyal2O35632 473 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 NdpP48744 131 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 St3gal3P97325 374 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 KncnQ307W7 124 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Magee2Q52KG3 523 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 SspnQ62147 216 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Znf146Q8BQN6 292 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Cnot2Q8C5L3 540 aaKnown RBP11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Pphln1Q8K2H1 381 aaKnown RBP11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Abhd17cQ8VCV1 320 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Olfr1384Q8VFA8 318 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Ms4a6dQ99N07 247 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Mettl26Q9DCS2 204 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Pus1Q9WU56 423 aa11.88□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Olfr1129A2AV41 314 aa11.87□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Ms4a18J3QN01 344 aa11.87□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Nrg3O35181 713 aa11.87□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 UbbP0CG49 305 aa11.87□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Gabrr1P56475 480 aa11.87□□□□□ -0.51
Sf3b6-201ENSMUST00000046207 Pdcd5P56812 126 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 64.6 ms