RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 DEFA5Q01523 94 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 CFHR3Q02985 330 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 TMEM187Q14656 261 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 RPL7L1Q6DKI1 246 aaKnown RBP6.08□□□□□ -1.44
CLK1-215ENST00000621181 ADAMTSL5Q6ZMM2 481 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 FAM219AQ8IW50 185 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 FAM71E2Q8N5Q1 922 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 RTN4IP1Q8WWV3 396 aaPredicted RBP6.08□□□□□ -1.44
CLK1-215ENST00000621181 GALNT14Q96FL9 552 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 UBE2E2Q96LR5 201 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 SULT4A1Q9BR01 284 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 ZNF2Q9BSG1 426 aaPredicted RBP6.08□□□□□ -1.44
CLK1-215ENST00000621181 SCRT1Q9BWW7 348 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 OVOL1O14753 267 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 IGF1P05019 195 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 HOXB5P09067 269 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 GP9P14770 177 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 GZMHP20718 246 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 KCNJ3P48549 501 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 SULT1A2P50226 295 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 CAV2P51636 162 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 F2RL1P55085 397 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 PAX5Q02548 391 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 PIGYQ3MUY2 71 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 GGNBP1Q5YKI7 109 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 SVBPQ8N300 66 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 PLPPR1Q8TBJ4 325 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 CPNE2Q96FN4 548 aaPredicted RBP6.07□□□□□ -1.44
CLK1-215ENST00000621181 FAAP24Q9BTP7 215 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 SEC11CQ9BY50 192 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 METTL9Q9H1A3 318 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 KLK15Q9H2R5 256 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 C11orf1Q9H5F2 150 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 GNB4Q9HAV0 340 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 UQCC1Q9NVA1 299 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 PLEKHJ1Q9NW61 149 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 RCC2Q9P258 522 aaKnown RBP6.07□□□□□ -1.44
CLK1-215ENST00000621181 C14orf166Q9Y224 244 aaKnown RBP6.07□□□□□ -1.44
CLK1-215ENST00000621181 PRELID1Q9Y255 219 aa6.07□□□□□ -1.44
CLK1-215ENST00000621181 C9JQL5 133 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 PET100P0DJ07 73 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 RCC1P18754 421 aaPredicted RBP6.06□□□□□ -1.44
CLK1-215ENST00000621181 AKR1C2P52895 323 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 UCP3P55916 312 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 GNB1P62873 340 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 FLI1Q01543 452 aaPredicted RBP6.06□□□□□ -1.44
CLK1-215ENST00000621181 AKR1C1Q04828 323 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 IL13RA2Q14627 380 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 RSU1Q15404 277 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 MMDQ15546 238 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 SRSF7Q16629 238 aaKnown RBP eCLIP6.06□□□□□ -1.44
CLK1-215ENST00000621181 IAH1Q2TAA2 248 aaPredicted RBP6.06□□□□□ -1.44
CLK1-215ENST00000621181 ASPHD1Q5U4P2 390 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 FAM53AQ6NSI3 398 aaPredicted RBP6.06□□□□□ -1.44
CLK1-215ENST00000621181 ZNF491Q8N8L2 437 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 UBALD1Q8TB05 177 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 MYOZ3Q8TDC0 251 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 BSCL2Q96G97 398 aaPredicted RBP6.06□□□□□ -1.44
CLK1-215ENST00000621181 TSNAXQ99598 290 aaKnown RBP6.06□□□□□ -1.44
CLK1-215ENST00000621181 NAA60Q9H7X0 242 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 WSB1Q9Y6I7 421 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 IGHV3-43A0A0B4J1X8 118 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 ZNF705EA8MWA4 302 aaPredicted RBP6.06□□□□□ -1.44
CLK1-215ENST00000621181 G3V318 75 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 TXNL1O43396 289 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 OR7C1O76099 320 aaPredicted RBP6.06□□□□□ -1.44
CLK1-215ENST00000621181 MBPP02686 304 aaPredicted RBP6.06□□□□□ -1.44
CLK1-215ENST00000621181 IGHV3-43DP0DP04 118 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 RPL12P30050 165 aaKnown RBP6.06□□□□□ -1.44
CLK1-215ENST00000621181 NPBWR1P48145 328 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 EIF5AP63241 154 aaKnown RBP6.06□□□□□ -1.44
CLK1-215ENST00000621181 RUNX1Q01196 453 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 Q6ZS49 121 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 CSMD3Q7Z407 3707 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 SGPP2Q8IWX5 399 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 LINC00311Q8N616 119 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 SUMF2Q8NBJ7 301 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 UBAC2Q8NBM4 344 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 DMBX1Q8NFW5 382 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 OR52M1Q8NGK5 317 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 DLX4Q92988 240 aaPredicted RBP6.06□□□□□ -1.44
CLK1-215ENST00000621181 ST6GALNAC6Q969X2 333 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 RBMXL1Q96E39 390 aaKnown RBP6.06□□□□□ -1.44
CLK1-215ENST00000621181 RSRP1Q9BUV0 290 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 TAF9BQ9HBM6 251 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 WFDC1Q9HC57 220 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 PARP11Q9NR21 331 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 GFOD1Q9NXC2 390 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 GSKIPQ9P0R6 139 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 GNG12Q9UBI6 72 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 FBXL17Q9UF56 701 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 ZNF580Q9UK33 172 aa6.06□□□□□ -1.44
CLK1-215ENST00000621181 TNCP24821 2201 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 TMEM30CPA0ZSE6 113 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 K7EPK0 472 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 GEMIN2O14893 280 aaKnown RBP6.05□□□□□ -1.44
CLK1-215ENST00000621181 ATP6V0E1O15342 81 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 GLAP06280 429 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 IGHV4-30-4P0DP06 118 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 PPIFP30405 207 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms