RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 LYPD6Q86Y78 171 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 DOLPP1Q86YN1 238 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 NHLRC2Q8NBF2 726 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 OR51G1Q8NGK1 321 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 HIST1H2BHQ93079 126 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 HIST1H2BNQ99877 126 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 HIST1H2BMQ99879 126 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 A8MWL6 223 aa11.6□□□□□ -0.55
CNOT3-210ENST00000618939 SLC31A2O15432 143 aa11.6□□□□□ -0.55
CNOT3-210ENST00000618939 ERVFRD-1P60508 538 aa11.6□□□□□ -0.55
CNOT3-210ENST00000618939 VAMP3Q15836 100 aa11.6□□□□□ -0.55
CNOT3-210ENST00000618939 REG1AP05451 166 aa11.6□□□□□ -0.55
CNOT3-210ENST00000618939 CBLN1P23435 193 aa11.6□□□□□ -0.55
CNOT3-210ENST00000618939 KIR2DL2P43627 348 aaPredicted RBP11.6□□□□□ -0.55
CNOT3-210ENST00000618939 Q6ZRM9 215 aa11.6□□□□□ -0.55
CNOT3-210ENST00000618939 C1QTNF9BB2RNN3 333 aa11.6□□□□□ -0.55
CNOT3-210ENST00000618939 OR9G9P0C7N8 305 aa11.6□□□□□ -0.55
CNOT3-210ENST00000618939 MRPL32Q9BYC8 188 aaKnown RBP11.6□□□□□ -0.55
CNOT3-210ENST00000618939 SAA2-SAA4A0A096LPE2 208 aa11.59□□□□□ -0.55
CNOT3-210ENST00000618939 ATXN7O15265 892 aaPredicted RBP11.59□□□□□ -0.55
CNOT3-210ENST00000618939 SAA2P0DJI9 122 aaPredicted RBP11.59□□□□□ -0.55
CNOT3-210ENST00000618939 ZNF137PP52743 207 aa11.59□□□□□ -0.55
CNOT3-210ENST00000618939 RPP25LQ8N5L8 163 aaKnown RBP11.59□□□□□ -0.55
CNOT3-210ENST00000618939 IFI27L2Q9H2X8 130 aa11.59□□□□□ -0.55
CNOT3-210ENST00000618939 AKAP6Q13023 2319 aa11.59□□□□□ -0.55
CNOT3-210ENST00000618939 LINC00587B1AMM8 73 aa11.59□□□□□ -0.55
CNOT3-210ENST00000618939 SRRM5B3KS81 715 aa11.59□□□□□ -0.55
CNOT3-210ENST00000618939 KIAA1644Q3SXP7 199 aa11.59□□□□□ -0.55
CNOT3-210ENST00000618939 TMEM14EPQ6UXP3 125 aa11.59□□□□□ -0.55
CNOT3-210ENST00000618939 PCNX1Q96RV3 2341 aa11.59□□□□□ -0.55
CNOT3-210ENST00000618939 C1RLQ9NZP8 487 aa11.59□□□□□ -0.55
CNOT3-210ENST00000618939 CXCL1P09341 107 aa11.59□□□□□ -0.55
CNOT3-210ENST00000618939 RIGQ13278 110 aa11.59□□□□□ -0.55
CNOT3-210ENST00000618939 LGALS7P47929 136 aa11.59□□□□□ -0.55
CNOT3-210ENST00000618939 NPIPB11E5RHQ5 1161 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 TMUB1Q9BVT8 246 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 SCNM1Q9BWG6 230 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 HILPDAQ9Y5L2 63 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 C15orf61A6NNL5 157 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 SLC17A3O00476 420 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 TCAPO15273 167 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 GCSAMLQ5JQS6 135 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 PRNTQ86SH4 94 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 PRR7Q8TB68 274 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 TMEM106BQ9NUM4 274 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 DOCK10Q96BY6 2186 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 M0QZK8 103 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 GGCTO75223 188 aaKnown RBP11.58□□□□□ -0.56
CNOT3-210ENST00000618939 IL15RAQ13261 267 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 MRPL37Q9BZE1 423 aaKnown RBP11.58□□□□□ -0.56
CNOT3-210ENST00000618939 TMEM191AQ9H0A3 160 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 ELOVL5Q9NYP7 299 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 METRNQ9UJH8 293 aa11.58□□□□□ -0.56
CNOT3-210ENST00000618939 IGHV1-69-2A0A0G2JMI3 117 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 FAM57AQ8TBR7 257 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 MRPL20Q9BYC9 149 aaKnown RBP11.57□□□□□ -0.56
CNOT3-210ENST00000618939 YTHDF2Q9Y5A9 579 aaKnown RBP11.57□□□□□ -0.56
CNOT3-210ENST00000618939 LINC00312Q9Y6C7 94 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 GATA2P23769 480 aaPredicted RBP11.57□□□□□ -0.56
CNOT3-210ENST00000618939 NHLH1Q02575 133 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 RNFT1Q5M7Z0 435 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 CCDC144NLQ6NUI1 221 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 SPSB3Q6PJ21 355 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 MIR17HGQ75NE6 70 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 GBGT1Q8N5D6 347 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 PLSCR4Q9NRQ2 329 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 FOXI3A8MTJ6 420 aaPredicted RBP11.57□□□□□ -0.56
CNOT3-210ENST00000618939 DKK1O94907 266 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 OR5AL1P0C617 328 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 SRIP30626 198 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 TMEM144Q7Z5S9 345 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 TMEM242Q9NWH2 141 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 IL36BQ9NZH7 164 aa11.57□□□□□ -0.56
CNOT3-210ENST00000618939 TRBV24-1A0A075B6N3 115 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 TMEM50AO95807 157 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 C1QTNF9P0C862 333 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 MEF2CQ06413 473 aaPredicted RBP11.56□□□□□ -0.56
CNOT3-210ENST00000618939 C1QL4Q86Z23 238 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 C5orf17Q8NAS9 161 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 COQ2Q96H96 371 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 SGK494Q96LW2 274 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 PPIAL4CA0A0B4J2A2 164 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 MOSP00540 346 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 PPIAL4GP0DN37 164 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 CCL3L1P16619 93 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 S100A4P26447 101 aaKnown RBP11.56□□□□□ -0.56
CNOT3-210ENST00000618939 BET1LQ9NYM9 111 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 RNF115Q9Y4L5 304 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 SPTAN1Q13813 2472 aaKnown RBP11.56□□□□□ -0.56
CNOT3-210ENST00000618939 TRBV9A0A0B4J1U6 114 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 C17orf100A8MU93 164 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 MLNRO43193 412 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 AMY1AP04745 511 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 SELLP14151 372 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 ELOVL1Q9BW60 279 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 SSBP3Q9BWW4 388 aaPredicted RBP11.56□□□□□ -0.56
CNOT3-210ENST00000618939 UPK2O00526 184 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 BSPH1Q075Z2 132 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 ZNF585BQ52M93 769 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 MBNL2Q5VZF2 373 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms