RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 C16orf82Q7Z2V1 217 aa12.27□□□□□ -0.45
TNFRSF11A-206ENST00000617039 COMMD1Q8N668 190 aa12.27□□□□□ -0.45
TNFRSF11A-206ENST00000617039 OR9G1Q8NH87 305 aa12.27□□□□□ -0.45
TNFRSF11A-206ENST00000617039 FAM222BQ8WU58 562 aa12.27□□□□□ -0.45
TNFRSF11A-206ENST00000617039 TUBG2Q9NRH3 451 aa12.27□□□□□ -0.45
TNFRSF11A-206ENST00000617039 CLEC5AQ9NY25 188 aa12.27□□□□□ -0.45
TNFRSF11A-206ENST00000617039 VAX2Q9UIW0 290 aa12.27□□□□□ -0.45
TNFRSF11A-206ENST00000617039 RNF115Q9Y4L5 304 aa12.27□□□□□ -0.45
TNFRSF11A-206ENST00000617039 IGHV3-66A0A0C4DH42 116 aa12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 LINC00596Q86U02 117 aa12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 RPP25LQ8N5L8 163 aaKnown RBP12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 HIST1H2BAQ96A08 127 aa12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 PPIAL4CA0A0B4J2A2 164 aa12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 PPIAL4GP0DN37 164 aa12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 CRYBB3P26998 211 aa12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 DUTP33316 252 aaKnown RBP12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 KLRD1Q13241 179 aa12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 TIGITQ495A1 244 aa12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 NEIL1Q96FI4 390 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 IDI2-AS1Q9NZ38 188 aa12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 SRRM5B3KS81 715 aa12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 CGAP01215 116 aa12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 WNT2P09544 360 aa12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 IL3RAP26951 378 aa12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 S100A12P80511 92 aa12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 ELOVL1Q9BW60 279 aa12.26□□□□□ -0.45
TNFRSF11A-206ENST00000617039 KBTBD11-OT1A0A1B0GTJ5 212 aa12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 LINC00869P0C866 280 aa12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 Q56UQ5 140 aa12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 KCNIP4Q6PIL6 250 aa12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 SSC4DQ8WTU2 575 aa12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 IL22RA2Q969J5 263 aa12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 GINS3Q9BRX5 216 aa12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 PARLQ9H300 379 aa12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 GRIFINA4D1Z8 144 aa12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 PIP4P1Q86T03 277 aa12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 SGMS2Q8NHU3 365 aa12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 NPCDR1Q9BY65 106 aa12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 SRD5A3Q9H8P0 318 aa12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 IGHG3P01860 377 aa12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 SLC25A5P05141 298 aaKnown RBP12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 ZNF137PP52743 207 aa12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 RPL8P62917 257 aaKnown RBP12.25□□□□□ -0.45
TNFRSF11A-206ENST00000617039 ADIPOQQ15848 244 aa12.24□□□□□ -0.45
TNFRSF11A-206ENST00000617039 METTL1Q9UBP6 276 aaKnown RBP12.24□□□□□ -0.45
TNFRSF11A-206ENST00000617039 TRAV5A0A0B4J249 113 aa12.24□□□□□ -0.45
TNFRSF11A-206ENST00000617039 ZNF207O43670 478 aaKnown RBP12.24□□□□□ -0.45
TNFRSF11A-206ENST00000617039 CSN3P07498 182 aa12.24□□□□□ -0.45
TNFRSF11A-206ENST00000617039 PMCHP20382 165 aa12.24□□□□□ -0.45
TNFRSF11A-206ENST00000617039 LY6EQ16553 131 aa12.24□□□□□ -0.45
TNFRSF11A-206ENST00000617039 OR1L4Q8NGR5 311 aa12.24□□□□□ -0.45
TNFRSF11A-206ENST00000617039 RNASE6Q93091 150 aaKnown RBP12.24□□□□□ -0.45
TNFRSF11A-206ENST00000617039 CEACAM18A8MTB9 384 aa12.24□□□□□ -0.45
TNFRSF11A-206ENST00000617039 SAA1P0DJI8 122 aaPredicted RBP12.24□□□□□ -0.45
TNFRSF11A-206ENST00000617039 SUB1P53999 127 aaKnown RBP eCLIP12.24□□□□□ -0.45
TNFRSF11A-206ENST00000617039 CTXND1A0A1B0GTU2 59 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 FOXI3A8MTJ6 420 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 NUDT19A8MXV4 375 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 FGF16O43320 207 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 C1QTNF9P0C862 333 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 HSPE1P61604 102 aaKnown RBP12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 GFI1BQ5VTD9 330 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 STPG3Q8N7X2 389 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 IMMP2LQ96T52 175 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 RAB1BQ9H0U4 201 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 NPVFQ9HCQ7 196 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 ASH1LQ9NR48 2969 aaKnown RBP12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 ARPC4-TTLL3A0A0A6YYG9 625 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 MBP02144 154 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 PAX9P55771 341 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 TMPRSS3P57727 454 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 SPCS3P61009 180 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 ASCL4Q6XD76 172 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 MAPK1IP1LQ8NDC0 245 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 CTDSP1Q9GZU7 261 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 MPZP25189 248 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 IER3P46695 156 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 RHOBP62745 196 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 MIR17HGQ75NE6 70 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 RAB1CQ92928 201 aa12.23□□□□□ -0.45
TNFRSF11A-206ENST00000617039 HECTD1Q9ULT8 2610 aa12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 XKRY2A2RUG3 117 aa12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 DLL1O00548 723 aa12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 CA1P00915 261 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 SRP19P09132 144 aaKnown RBP12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 C11orf53Q8IXP5 236 aa12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 NAT8BQ9UHF3 227 aa12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 TRAPPC1Q9Y5R8 145 aa12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 FOXH1O75593 365 aa12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 KBTBD11O94819 623 aa12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 CD33P20138 364 aa12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 PMS2P11Q13670 270 aa12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 OR5AU1Q8NGC0 362 aa12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 SCO2A0A1W2PP80 73 aa12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 GNG4P50150 75 aa12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 OR1L8Q8NGR8 309 aa12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 BARX1Q9HBU1 254 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 SEPSECSQ9HD40 501 aaKnown RBP12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 COA4Q9NYJ1 87 aa12.22□□□□□ -0.45
TNFRSF11A-206ENST00000617039 IL19Q9UHD0 177 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms