RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 NBEAP1P0C6P0 100 aa17.52■□□□□ 0.4
SMAD6-205ENST00000612349 MRPL18Q9H0U6 180 aaKnown RBP17.52■□□□□ 0.4
SMAD6-205ENST00000612349 PARLQ9H300 379 aa17.52■□□□□ 0.4
SMAD6-205ENST00000612349 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.52■□□□□ 0.4
SMAD6-205ENST00000612349 GTF3AQ92664 365 aaKnown RBP17.52■□□□□ 0.4
SMAD6-205ENST00000612349 DEPPQ9NTK1 212 aa17.52■□□□□ 0.4
SMAD6-205ENST00000612349 FBLN5Q9UBX5 448 aa17.52■□□□□ 0.4
SMAD6-205ENST00000612349 C17orf98A8MV24 154 aa17.52■□□□□ 0.39
SMAD6-205ENST00000612349 CELA3BP08861 270 aa17.52■□□□□ 0.39
SMAD6-205ENST00000612349 COPS9Q8WXC6 57 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 SH3BGRL3Q9H299 93 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 H3BTX0 84 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 IGFBP3P17936 291 aaPredicted RBP17.51■□□□□ 0.39
SMAD6-205ENST00000612349 RAB37Q96AX2 223 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 JMJD8Q96S16 334 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 A0A0G2JMZ2 1700 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 LRRC37A2A6NM11 1700 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 RRHO14718 337 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 NPFFR1Q9GZQ6 430 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 SHISA3A0PJX4 238 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 ZNF207O43670 478 aaKnown RBP17.51■□□□□ 0.39
SMAD6-205ENST00000612349 TRGC2P03986 189 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 MDKP21741 143 aaPredicted RBP17.51■□□□□ 0.39
SMAD6-205ENST00000612349 Q5BKY6 102 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 FOXI3A8MTJ6 420 aaPredicted RBP17.51■□□□□ 0.39
SMAD6-205ENST00000612349 YPEL1O60688 119 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 VENTXO95231 258 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 YPEL2Q96QA6 119 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 NPCDR1Q9BY65 106 aa17.51■□□□□ 0.39
SMAD6-205ENST00000612349 MRPL20Q9BYC9 149 aaKnown RBP17.51■□□□□ 0.39
SMAD6-205ENST00000612349 ICAM4Q14773 271 aa17.5■□□□□ 0.39
SMAD6-205ENST00000612349 H7C1H1 209 aa17.5■□□□□ 0.39
SMAD6-205ENST00000612349 ZNF56Q15929 161 aa17.5■□□□□ 0.39
SMAD6-205ENST00000612349 A0A0B4J293 547 aa17.5■□□□□ 0.39
SMAD6-205ENST00000612349 RPRMQ9NS64 109 aa17.5■□□□□ 0.39
SMAD6-205ENST00000612349 EIF3GO75821 320 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMAD6-205ENST00000612349 LINC00271P0C7V0 271 aa17.5■□□□□ 0.39
SMAD6-205ENST00000612349 OR10AG1Q8NH19 301 aa17.5■□□□□ 0.39
SMAD6-205ENST00000612349 C17orf82Q86X59 251 aaPredicted RBP17.49■□□□□ 0.39
SMAD6-205ENST00000612349 SCN5AQ14524 2016 aa17.49■□□□□ 0.39
SMAD6-205ENST00000612349 CEACAM4O75871 244 aa17.49■□□□□ 0.39
SMAD6-205ENST00000612349 IL18BPO95998 194 aa17.49■□□□□ 0.39
SMAD6-205ENST00000612349 CDKN1AP38936 164 aa17.49■□□□□ 0.39
SMAD6-205ENST00000612349 CCL1P22362 96 aa17.49■□□□□ 0.39
SMAD6-205ENST00000612349 CIRBPQ14011 172 aaKnown RBP17.49■□□□□ 0.39
SMAD6-205ENST00000612349 MBNL2Q5VZF2 373 aaKnown RBP17.49■□□□□ 0.39
SMAD6-205ENST00000612349 TUBA4BQ9H853 241 aa17.49■□□□□ 0.39
SMAD6-205ENST00000612349 TRBV6-7A0A0A0MS04 114 aa17.49■□□□□ 0.39
SMAD6-205ENST00000612349 PROB1E7EW31 1015 aa17.49■□□□□ 0.39
SMAD6-205ENST00000612349 TIMP3P35625 211 aa17.49■□□□□ 0.39
SMAD6-205ENST00000612349 FOXA2Q9Y261 457 aaPredicted RBP17.49■□□□□ 0.39
SMAD6-205ENST00000612349 PPP1R17O96001 155 aa17.48■□□□□ 0.39
SMAD6-205ENST00000612349 COL5A1-AS1Q5SY13 56 aa17.48■□□□□ 0.39
SMAD6-205ENST00000612349 ERASQ7Z444 233 aa17.48■□□□□ 0.39
SMAD6-205ENST00000612349 RCC1LQ96I51 464 aaKnown RBP17.48■□□□□ 0.39
SMAD6-205ENST00000612349 GREB1Q4ZG55 1949 aa17.48■□□□□ 0.39
SMAD6-205ENST00000612349 MTCL1Q9Y4B5 1905 aaKnown RBP17.48■□□□□ 0.39
SMAD6-205ENST00000612349 ARHGEF17Q96PE2 2063 aaPredicted RBP17.48■□□□□ 0.39
SMAD6-205ENST00000612349 ZNF385CQ66K41 422 aaPredicted RBP17.48■□□□□ 0.39
SMAD6-205ENST00000612349 RARRES2Q99969 163 aa17.48■□□□□ 0.39
SMAD6-205ENST00000612349 IGHV3OR16-13A0A075B7E8 117 aa17.48■□□□□ 0.39
SMAD6-205ENST00000612349 IGHV3-74A0A0B4J1X5 117 aa17.48■□□□□ 0.39
SMAD6-205ENST00000612349 YAE1D1Q9NRH1 226 aa17.48■□□□□ 0.39
SMAD6-205ENST00000612349 FAM74A4Q5TZK3 123 aa17.48■□□□□ 0.39
SMAD6-205ENST00000612349 LOC105371267A0A1B0GV96 52 aa17.47■□□□□ 0.39
SMAD6-205ENST00000612349 NBR2O15453 112 aa17.47■□□□□ 0.39
SMAD6-205ENST00000612349 CENPWQ5EE01 88 aa17.47■□□□□ 0.39
SMAD6-205ENST00000612349 NBASA2RRP1 2371 aa17.47■□□□□ 0.39
SMAD6-205ENST00000612349 THBDP07204 575 aa17.47■□□□□ 0.39
SMAD6-205ENST00000612349 TEX45Q8NA69 505 aa17.47■□□□□ 0.39
SMAD6-205ENST00000612349 SFRP2Q96HF1 295 aa17.47■□□□□ 0.39
SMAD6-205ENST00000612349 DDTP30046 118 aa17.47■□□□□ 0.39
SMAD6-205ENST00000612349 GPR183P32249 361 aa17.47■□□□□ 0.39
SMAD6-205ENST00000612349 ADIPOQQ15848 244 aa17.47■□□□□ 0.39
SMAD6-205ENST00000612349 ZNF506Q5JVG8 444 aa17.47■□□□□ 0.39
SMAD6-205ENST00000612349 OR1P1Q8NH06 330 aa17.47■□□□□ 0.39
SMAD6-205ENST00000612349 TMEM133Q9H2Q1 129 aa17.47■□□□□ 0.39
SMAD6-205ENST00000612349 PDCD11Q14690 1871 aaKnown RBP17.47■□□□□ 0.39
SMAD6-205ENST00000612349 NEU1Q99519 415 aa17.47■□□□□ 0.39
SMAD6-205ENST00000612349 FBLL1A6NHQ2 334 aaKnown RBP17.46■□□□□ 0.39
SMAD6-205ENST00000612349 RBFOX2O43251 390 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMAD6-205ENST00000612349 PRSS8Q16651 343 aa17.46■□□□□ 0.39
SMAD6-205ENST00000612349 WDR82Q6UXN9 313 aa17.46■□□□□ 0.39
SMAD6-205ENST00000612349 ANKRD36A6QL64 1941 aa17.46■□□□□ 0.39
SMAD6-205ENST00000612349 TCF21O43680 179 aa17.46■□□□□ 0.39
SMAD6-205ENST00000612349 PEMTQ9UBM1 199 aa17.46■□□□□ 0.39
SMAD6-205ENST00000612349 MYOD1P15172 320 aa17.46■□□□□ 0.39
SMAD6-205ENST00000612349 SGK494Q96LW2 274 aa17.46■□□□□ 0.39
SMAD6-205ENST00000612349 DMRT1Q9Y5R6 373 aa17.46■□□□□ 0.39
SMAD6-205ENST00000612349 SRIP30626 198 aa17.46■□□□□ 0.38
SMAD6-205ENST00000612349 PLPPR1Q8TBJ4 325 aa17.46■□□□□ 0.38
SMAD6-205ENST00000612349 SPRR3Q9UBC9 169 aa17.46■□□□□ 0.38
SMAD6-205ENST00000612349 SPTAN1Q13813 2472 aaKnown RBP17.46■□□□□ 0.38
SMAD6-205ENST00000612349 IGKV3-20P01619 116 aa17.45■□□□□ 0.38
SMAD6-205ENST00000612349 GEMIN7Q9H840 131 aaKnown RBP17.45■□□□□ 0.38
SMAD6-205ENST00000612349 FOLR2P14207 255 aa17.45■□□□□ 0.38
SMAD6-205ENST00000612349 PRSS22Q9GZN4 317 aa17.45■□□□□ 0.38
SMAD6-205ENST00000612349 MSGN1A6NI15 193 aa17.45■□□□□ 0.38
SMAD6-205ENST00000612349 CCL3L1P16619 93 aa17.45■□□□□ 0.38
SMAD6-205ENST00000612349 IGFBP2P18065 325 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms