RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 OR52E5Q8NH55 327 aa12.95□□□□□ -0.34
SHKBP1-219ENST00000599575 COQ8AQ8NI60 647 aa12.95□□□□□ -0.34
SHKBP1-219ENST00000599575 UBE2E2Q96LR5 201 aa12.95□□□□□ -0.34
SHKBP1-219ENST00000599575 CITED2Q99967 270 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-219ENST00000599575 PDCD10Q9BUL8 212 aa12.95□□□□□ -0.34
SHKBP1-219ENST00000599575 FLVCR2Q9UPI3 526 aa12.95□□□□□ -0.34
SHKBP1-219ENST00000599575 A0A0B4J293 547 aa12.94□□□□□ -0.34
SHKBP1-219ENST00000599575 A0A0G2JLM5 398 aa12.94□□□□□ -0.34
SHKBP1-219ENST00000599575 INS-IGF2F8WCM5 200 aa12.94□□□□□ -0.34
SHKBP1-219ENST00000599575 H2AFB2P0C5Z0 115 aa12.94□□□□□ -0.34
SHKBP1-219ENST00000599575 KLK9Q2XQG4 91 aa12.94□□□□□ -0.34
SHKBP1-219ENST00000599575 NMSQ5H8A3 153 aa12.94□□□□□ -0.34
SHKBP1-219ENST00000599575 C10orf55Q5SWW7 151 aa12.94□□□□□ -0.34
SHKBP1-219ENST00000599575 ASPHD1Q5U4P2 390 aa12.94□□□□□ -0.34
SHKBP1-219ENST00000599575 PLET1Q6UQ28 207 aa12.94□□□□□ -0.34
SHKBP1-219ENST00000599575 OR1L6Q8NGR2 347 aa12.94□□□□□ -0.34
SHKBP1-219ENST00000599575 FYTTD1Q96QD9 318 aaKnown RBP12.94□□□□□ -0.34
SHKBP1-219ENST00000599575 KLK9Q9UKQ9 250 aa12.94□□□□□ -0.34
SHKBP1-219ENST00000599575 A0A1B0GU03 582 aa12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 SOX15O60248 233 aa12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 SULT1A3P0DMM9 295 aa12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 SULT1A4P0DMN0 295 aa12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 PF4V1P10720 104 aa12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 HIST1H1BP16401 226 aaKnown RBP12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 ANXA7P20073 488 aaKnown RBP12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 PSMB6P28072 239 aa12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 RPL23AP62750 156 aaKnown RBP12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 PRCDQ00LT1 54 aa12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 SRSF4Q08170 494 aaKnown RBP12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 PDLIM3Q53GG5 364 aaPredicted RBP12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 FAM209BQ5JX69 171 aa12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 C10orf99Q6UWK7 81 aa12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 NRARPQ7Z6K4 114 aa12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 OR4F17Q8NGA8 305 aa12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 MITD1Q8WV92 249 aa12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 USMG5Q96IX5 58 aa12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 OR4F4Q96R69 305 aa12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 NSG2Q9Y328 171 aa12.93□□□□□ -0.34
SHKBP1-219ENST00000599575 DNHD1Q96M86 4753 aa12.92□□□□□ -0.34
SHKBP1-219ENST00000599575 TRAV6A0A075B6T7 132 aa12.92□□□□□ -0.34
SHKBP1-219ENST00000599575 IGLC7A0M8Q6 106 aa12.92□□□□□ -0.34
SHKBP1-219ENST00000599575 E7EUB6 86 aa12.92□□□□□ -0.34
SHKBP1-219ENST00000599575 PRAF2O60831 178 aa12.92□□□□□ -0.34
SHKBP1-219ENST00000599575 PTTG1O95997 202 aa12.92□□□□□ -0.34
SHKBP1-219ENST00000599575 IL5P05113 134 aa12.92□□□□□ -0.34
SHKBP1-219ENST00000599575 CTRB1P17538 263 aa12.92□□□□□ -0.34
SHKBP1-219ENST00000599575 ANKRD55Q3KP44 614 aa12.92□□□□□ -0.34
SHKBP1-219ENST00000599575 CTRB2Q6GPI1 263 aa12.92□□□□□ -0.34
SHKBP1-219ENST00000599575 LYZL2Q7Z4W2 148 aa12.92□□□□□ -0.34
SHKBP1-219ENST00000599575 C11orf44Q8N8P7 122 aa12.92□□□□□ -0.34
SHKBP1-219ENST00000599575 OR5T1Q8NG75 326 aa12.92□□□□□ -0.34
SHKBP1-219ENST00000599575 CASTOR1Q8WTX7 329 aa12.92□□□□□ -0.34
SHKBP1-219ENST00000599575 TNCP24821 2201 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 TRBV9A0A0B4J1U6 114 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 A0A1B0GW64 132 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 CGB1A6NKQ9 187 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 FAM223BA6NKX1 122 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 IFNA21P01568 189 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 RPLP1P05386 114 aaKnown RBP12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 SPCS3P61009 180 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 RUNX1Q01196 453 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 DCTN2Q13561 401 aaKnown RBP12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 SMCO1Q147U7 214 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 FAM223AQ8IWN6 122 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 ZNF491Q8N8L2 437 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 NECAP1Q8NC96 275 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 GPR146Q96CH1 333 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 MARVELD1Q9BSK0 173 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 ZNF355PQ9NSJ1 428 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 THYN1Q9P016 225 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 CACNG5Q9UF02 275 aa12.91□□□□□ -0.34
SHKBP1-219ENST00000599575 A0A0G2JRQ6 117 aa12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 HMX3A6NHT5 357 aa12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 ADARB2-AS1A8MUL3 147 aa12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 FAM90A26D6RGX4 464 aa12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 ST8SIA3O43173 380 aa12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 IFNA17P01571 189 aa12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 TRGV3P03979 118 aa12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 DEFA4P12838 97 aa12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 TPPP2P59282 170 aa12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 ERHP84090 104 aaKnown RBP12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 KHDC1LQ5JSQ8 128 aa12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 Q6ZRM9 215 aa12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 ZNF431Q8TF32 576 aaPredicted RBP12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 C4orf3Q8WVX3 66 aa12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 HINT2Q9BX68 163 aa12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 KLK15Q9H2R5 256 aa12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 PLEKHA3Q9HB20 300 aa12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 GPN1Q9HCN4 374 aaPredicted RBP12.9□□□□□ -0.34
SHKBP1-219ENST00000599575 DBX1A6NMT0 343 aa12.89□□□□□ -0.35
SHKBP1-219ENST00000599575 LY86O95711 162 aa12.89□□□□□ -0.35
SHKBP1-219ENST00000599575 OR13C7P0DN81 318 aa12.89□□□□□ -0.35
SHKBP1-219ENST00000599575 AREGP15514 252 aa12.89□□□□□ -0.35
SHKBP1-219ENST00000599575 WT1-ASQ06250 92 aa12.89□□□□□ -0.35
SHKBP1-219ENST00000599575 KIAA0141Q14154 515 aaPredicted RBP12.89□□□□□ -0.35
SHKBP1-219ENST00000599575 PRR31Q5SQ13 230 aa12.89□□□□□ -0.35
SHKBP1-219ENST00000599575 ZNF114Q8NC26 417 aa12.89□□□□□ -0.35
SHKBP1-219ENST00000599575 ENY2Q9NPA8 101 aa12.89□□□□□ -0.35
SHKBP1-219ENST00000599575 PLXNB1O43157 2135 aa12.89□□□□□ -0.35
SHKBP1-219ENST00000599575 C13orf42A0A1B0GVH6 325 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms