RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 OR4C16Q8NGL9 310 aa13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 USMG5Q96IX5 58 aa13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 SCGB3A2Q96PL1 93 aa13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 TSC22D3Q99576 134 aa13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 EDA2RQ9HAV5 297 aa13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 C14orf166Q9Y224 244 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 ATG12O94817 140 aa13.41□□□□□ -0.26
SHKBP1-203ENST00000594298 DHFRP00374 187 aa13.41□□□□□ -0.26
SHKBP1-203ENST00000594298 KRASP01116 189 aa13.41□□□□□ -0.26
SHKBP1-203ENST00000594298 APELAP0DMC3 54 aa13.41□□□□□ -0.26
SHKBP1-203ENST00000594298 C10orf55Q5SWW7 151 aa13.41□□□□□ -0.26
SHKBP1-203ENST00000594298 ADAD2Q8NCV1 583 aaKnown RBP13.41□□□□□ -0.26
SHKBP1-203ENST00000594298 OR13C8Q8NGS7 320 aa13.41□□□□□ -0.26
SHKBP1-203ENST00000594298 MARCH1Q8TCQ1 289 aa13.41□□□□□ -0.26
SHKBP1-203ENST00000594298 RANGRFQ9HD47 186 aaPredicted RBP13.41□□□□□ -0.26
SHKBP1-203ENST00000594298 FKBP11Q9NYL4 201 aa13.41□□□□□ -0.26
SHKBP1-203ENST00000594298 ZNF257Q9Y2Q1 563 aa13.41□□□□□ -0.26
SHKBP1-203ENST00000594298 V9GYH0 126 aa13.41□□□□□ -0.26
SHKBP1-203ENST00000594298 H0Y980 276 aa13.4□□□□□ -0.26
SHKBP1-203ENST00000594298 PI3P19957 117 aa13.4□□□□□ -0.26
SHKBP1-203ENST00000594298 ZP3P21754 424 aa13.4□□□□□ -0.26
SHKBP1-203ENST00000594298 ETV6P41212 452 aa13.4□□□□□ -0.26
SHKBP1-203ENST00000594298 THOC7Q6I9Y2 204 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-203ENST00000594298 FAAP20Q6NZ36 180 aa13.4□□□□□ -0.26
SHKBP1-203ENST00000594298 SGPP2Q8IWX5 399 aa13.4□□□□□ -0.26
SHKBP1-203ENST00000594298 TOMM5Q8N4H5 51 aa13.4□□□□□ -0.26
SHKBP1-203ENST00000594298 DEDD2Q8WXF8 326 aa13.4□□□□□ -0.26
SHKBP1-203ENST00000594298 SRSF8Q9BRL6 282 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-203ENST00000594298 MCUBQ9NWR8 336 aa13.4□□□□□ -0.26
SHKBP1-203ENST00000594298 SLC2A8Q9NY64 477 aa13.4□□□□□ -0.26
SHKBP1-203ENST00000594298 TRAV3A0A0B4J244 114 aa13.39□□□□□ -0.27
SHKBP1-203ENST00000594298 C3orf85A0A1B0GTC6 90 aa13.39□□□□□ -0.27
SHKBP1-203ENST00000594298 HMX3A6NHT5 357 aa13.39□□□□□ -0.27
SHKBP1-203ENST00000594298 FAM223BA6NKX1 122 aa13.39□□□□□ -0.27
SHKBP1-203ENST00000594298 NPIPB5A8MRT5 1133 aa13.39□□□□□ -0.27
SHKBP1-203ENST00000594298 TEX22C9J3V5 150 aa13.39□□□□□ -0.27
SHKBP1-203ENST00000594298 G6PCP35575 357 aa13.39□□□□□ -0.27
SHKBP1-203ENST00000594298 H2BFWTQ7Z2G1 175 aa13.39□□□□□ -0.27
SHKBP1-203ENST00000594298 HSD17B13Q7Z5P4 300 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-203ENST00000594298 HAPLN4Q86UW8 402 aa13.39□□□□□ -0.27
SHKBP1-203ENST00000594298 FAM223AQ8IWN6 122 aa13.39□□□□□ -0.27
SHKBP1-203ENST00000594298 OR51S1Q8NGJ8 323 aa13.39□□□□□ -0.27
SHKBP1-203ENST00000594298 PRNDQ9UKY0 176 aa13.39□□□□□ -0.27
SHKBP1-203ENST00000594298 EPPK1P58107 5090 aaKnown RBP13.39□□□□□ -0.27
SHKBP1-203ENST00000594298 TRAPPC2P0DI81 140 aa13.38□□□□□ -0.27
SHKBP1-203ENST00000594298 TRAPPC2BP0DI82 140 aa13.38□□□□□ -0.27
SHKBP1-203ENST00000594298 HIST1H1BP16401 226 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-203ENST00000594298 OR2B8PP59922 312 aa13.38□□□□□ -0.27
SHKBP1-203ENST00000594298 ATP5G2Q06055 141 aa13.38□□□□□ -0.27
SHKBP1-203ENST00000594298 KLF5Q13887 457 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-203ENST00000594298 ZFAND6Q6FIF0 208 aa13.38□□□□□ -0.27
SHKBP1-203ENST00000594298 OR1L8Q8NGR8 309 aa13.38□□□□□ -0.27
SHKBP1-203ENST00000594298 GPR132Q9UNW8 380 aa13.38□□□□□ -0.27
SHKBP1-203ENST00000594298 DNAH1Q9P2D7 4330 aa13.38□□□□□ -0.27
SHKBP1-203ENST00000594298 TEX13DA0A0J9YY54 714 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 E7EUB6 86 aa13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 CYB5BO43169 146 aa13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 CRYGCP07315 174 aa13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 DEFA4P12838 97 aa13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 PSMB6P28072 239 aa13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 INPP1P49441 399 aa13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 RHOGP84095 191 aa13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 FAM209BQ5JX69 171 aa13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 IL34Q6ZMJ4 242 aa13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 GDPD1Q8N9F7 314 aa13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 NECAP1Q8NC96 275 aa13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 OR9G4Q8NGQ1 327 aa13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 OR4A16Q8NH70 328 aa13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 SEC22AQ96IW7 307 aa13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 QTRT1Q9BXR0 403 aaKnown RBP13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 GAR1Q9NY12 217 aaKnown RBP13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 OR51B2Q9Y5P1 312 aa13.37□□□□□ -0.27
SHKBP1-203ENST00000594298 TRBV9A0A0B4J1U6 114 aa13.36□□□□□ -0.27
SHKBP1-203ENST00000594298 TEX50A0A1B0GTY4 177 aa13.36□□□□□ -0.27
SHKBP1-203ENST00000594298 DHODHQ02127 395 aa13.36□□□□□ -0.27
SHKBP1-203ENST00000594298 KLF9Q13886 244 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-203ENST00000594298 ZNF79Q15937 498 aa13.36□□□□□ -0.27
SHKBP1-203ENST00000594298 TRIM16LQ309B1 348 aa13.36□□□□□ -0.27
SHKBP1-203ENST00000594298 OR5B3Q8NH48 314 aa13.36□□□□□ -0.27
SHKBP1-203ENST00000594298 TRIM63Q969Q1 353 aa13.36□□□□□ -0.27
SHKBP1-203ENST00000594298 MRGPRFQ96AM1 343 aa13.36□□□□□ -0.27
SHKBP1-203ENST00000594298 TMEM56Q96MV1 263 aa13.36□□□□□ -0.27
SHKBP1-203ENST00000594298 SPATA25Q9BR10 227 aa13.36□□□□□ -0.27
SHKBP1-203ENST00000594298 RTBDNQ9BSG5 229 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-203ENST00000594298 KCNIP3Q9Y2W7 256 aa13.36□□□□□ -0.27
SHKBP1-203ENST00000594298 PRH1P02810 166 aa13.35□□□□□ -0.27
SHKBP1-203ENST00000594298 MYOD1P15172 320 aa13.35□□□□□ -0.27
SHKBP1-203ENST00000594298 CTRB1P17538 263 aa13.35□□□□□ -0.27
SHKBP1-203ENST00000594298 CTRB2Q6GPI1 263 aa13.35□□□□□ -0.27
SHKBP1-203ENST00000594298 ZNF343Q6P1L6 599 aa13.35□□□□□ -0.27
SHKBP1-203ENST00000594298 TP53RKQ96S44 253 aa13.35□□□□□ -0.27
SHKBP1-203ENST00000594298 HINT2Q9BX68 163 aa13.35□□□□□ -0.27
SHKBP1-203ENST00000594298 C5orf66Q9H5L9 145 aa13.35□□□□□ -0.27
SHKBP1-203ENST00000594298 NAA60Q9H7X0 242 aa13.35□□□□□ -0.27
SHKBP1-203ENST00000594298 AKIP1Q9NQ31 210 aa13.35□□□□□ -0.27
SHKBP1-203ENST00000594298 SIGLEC8Q9NYZ4 499 aa13.35□□□□□ -0.27
SHKBP1-203ENST00000594298 PEF1Q9UBV8 284 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-203ENST00000594298 STARD9Q9P2P6 4700 aa13.35□□□□□ -0.27
SHKBP1-203ENST00000594298 BIRC6Q9NR09 4857 aa13.35□□□□□ -0.27
SHKBP1-203ENST00000594298 A0A1B0GW64 132 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms