RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 THOC7Q6I9Y2 204 aaKnown RBP7.78□□□□□ -1.16
BRCA1-227ENST00000591849 LHFPL1Q86WI0 220 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 OR4C16Q8NGL9 310 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 OR13C8Q8NGS7 320 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 TMEM56Q96MV1 263 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 SRSF8Q9BRL6 282 aaKnown RBP7.78□□□□□ -1.16
BRCA1-227ENST00000591849 RBM38Q9H0Z9 239 aaKnown RBP7.78□□□□□ -1.16
BRCA1-227ENST00000591849 AKIP1Q9NQ31 210 aa7.78□□□□□ -1.16
BRCA1-227ENST00000591849 ANKRD20A5PA0PJZ0 165 aa7.77□□□□□ -1.17
BRCA1-227ENST00000591849 E7EUB6 86 aa7.77□□□□□ -1.17
BRCA1-227ENST00000591849 H0Y980 276 aa7.77□□□□□ -1.17
BRCA1-227ENST00000591849 SURF2Q15527 256 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-227ENST00000591849 C15orf32Q32M92 178 aa7.77□□□□□ -1.17
BRCA1-227ENST00000591849 FAM209BQ5JX69 171 aa7.77□□□□□ -1.17
BRCA1-227ENST00000591849 SLC25A24Q6NUK1 477 aa7.77□□□□□ -1.17
BRCA1-227ENST00000591849 ZNF343Q6P1L6 599 aa7.77□□□□□ -1.17
BRCA1-227ENST00000591849 HSD17B13Q7Z5P4 300 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-227ENST00000591849 ZNF429Q86V71 674 aa7.77□□□□□ -1.17
BRCA1-227ENST00000591849 Q8N402 240 aa7.77□□□□□ -1.17
BRCA1-227ENST00000591849 TOMM5Q8N4H5 51 aa7.77□□□□□ -1.17
BRCA1-227ENST00000591849 OR51S1Q8NGJ8 323 aa7.77□□□□□ -1.17
BRCA1-227ENST00000591849 MRGPRFQ96AM1 343 aa7.77□□□□□ -1.17
BRCA1-227ENST00000591849 RRNAD1Q96FB5 475 aaKnown RBP7.77□□□□□ -1.17
BRCA1-227ENST00000591849 SOSTQ9BQB4 213 aa7.77□□□□□ -1.17
BRCA1-227ENST00000591849 PDCD10Q9BUL8 212 aa7.77□□□□□ -1.17
BRCA1-227ENST00000591849 THYN1Q9P016 225 aa7.77□□□□□ -1.17
BRCA1-227ENST00000591849 TRBV9A0A0B4J1U6 114 aa7.76□□□□□ -1.17
BRCA1-227ENST00000591849 B3GALNT1O75752 331 aa7.76□□□□□ -1.17
BRCA1-227ENST00000591849 NDUFB8O95169 186 aa7.76□□□□□ -1.17
BRCA1-227ENST00000591849 CRYGCP07315 174 aa7.76□□□□□ -1.17
BRCA1-227ENST00000591849 FGF2P09038 288 aa7.76□□□□□ -1.17
BRCA1-227ENST00000591849 PTBP1P26599 531 aaKnown RBP eCLIP7.76□□□□□ -1.171e-7■■■■■ 45.2
BRCA1-227ENST00000591849 KRTAP10-11P60412 298 aa7.76□□□□□ -1.17
BRCA1-227ENST00000591849 ZNF45Q02386 682 aa7.76□□□□□ -1.17
BRCA1-227ENST00000591849 SP6Q3SY56 376 aa7.76□□□□□ -1.17
BRCA1-227ENST00000591849 ZNF57Q68EA5 555 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-227ENST00000591849 CADM3Q8N126 398 aa7.76□□□□□ -1.17
BRCA1-227ENST00000591849 OR10W1Q8NGF6 305 aa7.76□□□□□ -1.17
BRCA1-227ENST00000591849 OR5B3Q8NH48 314 aa7.76□□□□□ -1.17
BRCA1-227ENST00000591849 LSM10Q969L4 123 aaKnown RBP7.76□□□□□ -1.17
BRCA1-227ENST00000591849 EEF1AKMT3Q96AZ1 226 aa7.76□□□□□ -1.17
BRCA1-227ENST00000591849 TP53RKQ96S44 253 aa7.76□□□□□ -1.17
BRCA1-227ENST00000591849 KCNIP3Q9Y2W7 256 aa7.76□□□□□ -1.17
BRCA1-227ENST00000591849 A0A1B0GW64 132 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 IFNA17P01571 189 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 IGHV3-23P01764 117 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 CTRB1P17538 263 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 SYNJ2BPP57105 145 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 ERHP84090 104 aaKnown RBP7.75□□□□□ -1.17
BRCA1-227ENST00000591849 DHODHQ02127 395 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 EGFEM1PQ0D2K5 195 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 DCTN2Q13561 401 aaKnown RBP7.75□□□□□ -1.17
BRCA1-227ENST00000591849 CTRB2Q6GPI1 263 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 C19orf35Q6ZS72 473 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 CCDC190Q86UF4 302 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 SGPP2Q8IWX5 399 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 OR6Q1Q8NGQ2 317 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 OR1L6Q8NGR2 347 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 SEC22AQ96IW7 307 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 CXorf58Q96LI9 332 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 NAA60Q9H7X0 242 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 ENY2Q9NPA8 101 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 PEMTQ9UBM1 199 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 S4R3C0 116 aa7.75□□□□□ -1.17
BRCA1-227ENST00000591849 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.74□□□□□ -1.17
BRCA1-227ENST00000591849 WI2-2373I1.2A0A1W2PRP0 233 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 IGLC7A0M8Q6 106 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 CGB1A6NKQ9 187 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 C15orf61A6NNL5 157 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 GGCTO75223 188 aaKnown RBP7.74□□□□□ -1.17
BRCA1-227ENST00000591849 IGKV1-39P01597 117 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 TRBV12-3P01733 135 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 IGKV1D-39P04432 117 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 OR5AC1P0C628 307 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 AKR1C4P17516 323 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 ARL3P36405 182 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 HSPE1P61604 102 aaKnown RBP7.74□□□□□ -1.17
BRCA1-227ENST00000591849 KLF5Q13887 457 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-227ENST00000591849 TRIQKQ629K1 86 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 ACSM6Q6P461 480 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 CLEC19AQ6UXS0 136 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 GDPD1Q8N9F7 314 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 FANCD2OSQ96PS1 177 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 RTBDNQ9BSG5 229 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-227ENST00000591849 PLEKHA3Q9HB20 300 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 NDUFA4L2Q9NRX3 87 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 TMEM14BQ9NUH8 114 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 SLC2A8Q9NY64 477 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 GPR132Q9UNW8 380 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 V9GYH0 126 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 TNCP24821 2201 aa7.74□□□□□ -1.17
BRCA1-227ENST00000591849 TRBV7-1A0A0A6YYK4 115 aa7.73□□□□□ -1.17
BRCA1-227ENST00000591849 ZNF320A2RRD8 509 aa7.73□□□□□ -1.17
BRCA1-227ENST00000591849 CRYM-AS1A6NIL9 109 aa7.73□□□□□ -1.17
BRCA1-227ENST00000591849 OR2C1O95371 312 aa7.73□□□□□ -1.17
BRCA1-227ENST00000591849 ANXA3P12429 323 aa7.73□□□□□ -1.17
BRCA1-227ENST00000591849 UCP1P25874 307 aa7.73□□□□□ -1.17
BRCA1-227ENST00000591849 SNCAP37840 140 aa7.73□□□□□ -1.17
BRCA1-227ENST00000591849 WT1-ASQ06250 92 aa7.73□□□□□ -1.17
BRCA1-227ENST00000591849 IZUMO4Q1ZYL8 232 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms