RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 Q8N6K4 173 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 NPBQ8NG41 125 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 TMED6Q8WW62 240 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 PINX1Q96BK5 328 aaKnown RBP9.13□□□□□ -0.95
SMAD4-205ENST00000588745 FBXL15Q9H469 300 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 KIAA1456Q9P272 454 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 ASH1LQ9NR48 2969 aaKnown RBP9.13□□□□□ -0.95
SMAD4-205ENST00000588745 CR1P17927 2039 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 IGHV3OR16-10A0A075B7F0 116 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 CGB1A6NKQ9 187 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 J3QLI3 93 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 ACTL6BO94805 426 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 IFNA5P01569 189 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 NMBP08949 121 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 IGHV4-31P0DP07 118 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 IGHV4-38-2P0DP08 117 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 CD24P25063 80 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 NPY1RP25929 384 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 BRS3P32247 399 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 RAB11AP62491 216 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 PJVKQ0ZLH3 352 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 HNF4GQ14541 408 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 PLGLAQ15195 96 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 TNXAQ16473 311 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 ATP6V1FQ16864 119 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 TMEM249Q2WGJ8 235 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 FBLN7Q53RD9 439 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 HSD17B11Q8NBQ5 300 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 MAPK1IP1LQ8NDC0 245 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 OR10P1Q8NGE3 313 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 TMEM170AQ8WVE7 144 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 PCNPQ8WW12 178 aaKnown RBP9.12□□□□□ -0.95
SMAD4-205ENST00000588745 SLC25A32Q9H2D1 315 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 TNCP24821 2201 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 E7EUB6 86 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 FBXO24O75426 580 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 CA2P00918 260 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 SEC11BP0C7V7 166 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 SPP1P10451 314 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 TMEM11P17152 192 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 RPL27AP46776 148 aaKnown RBP9.12□□□□□ -0.95
SMAD4-205ENST00000588745 COMPP49747 757 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-205ENST00000588745 ATP5IP56385 69 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-205ENST00000588745 BSXQ3C1V8 233 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 SLC25A24Q6NUK1 477 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 BRD3OSQ6XYD6 125 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 ETV3LQ6ZN32 361 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 OR10W1Q8NGF6 305 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 TMEM147Q9BVK8 224 aa9.12□□□□□ -0.95
SMAD4-205ENST00000588745 PARD6GQ9BYG4 376 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-205ENST00000588745 UBE2L5PA0A1B0GUS4 154 aa9.11□□□□□ -0.95
SMAD4-205ENST00000588745 A0A1B0GW64 132 aa9.11□□□□□ -0.95
SMAD4-205ENST00000588745 PRSS46E5RG02 174 aa9.11□□□□□ -0.95
SMAD4-205ENST00000588745 TGFAP01135 160 aa9.11□□□□□ -0.95
SMAD4-205ENST00000588745 AVPP01185 164 aa9.11□□□□□ -0.95
SMAD4-205ENST00000588745 FAM106CPP0CH98 169 aa9.11□□□□□ -0.95
SMAD4-205ENST00000588745 RNASE2P10153 161 aaKnown RBP9.11□□□□□ -0.95
SMAD4-205ENST00000588745 ATP6V0CP27449 155 aa9.11□□□□□ -0.95
SMAD4-205ENST00000588745 SSBP2P81877 361 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-205ENST00000588745 ERHP84090 104 aaKnown RBP9.11□□□□□ -0.95
SMAD4-205ENST00000588745 C5orf64Q2M2E5 130 aa9.11□□□□□ -0.95
SMAD4-205ENST00000588745 VWC2Q2TAL6 325 aa9.11□□□□□ -0.95
SMAD4-205ENST00000588745 KLF17Q5JT82 389 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-205ENST00000588745 MRPL41Q8IXM3 137 aaKnown RBP9.11□□□□□ -0.95
SMAD4-205ENST00000588745 LRRC20Q8TCA0 184 aa9.11□□□□□ -0.95
SMAD4-205ENST00000588745 GNPNAT1Q96EK6 184 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-205ENST00000588745 SH3BGRL3Q9H299 93 aa9.11□□□□□ -0.95
SMAD4-205ENST00000588745 UQCC1Q9NVA1 299 aa9.11□□□□□ -0.95
SMAD4-205ENST00000588745 UNC79Q9P2D8 2635 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 A0A0U1RQK1 487 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 IGLC7A0M8Q6 106 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 FGF16O43320 207 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 ATP6V1G1O75348 118 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 IFNA4P05014 189 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 SNCAP37840 140 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 SULT1A2P50226 295 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 GNB1P62873 340 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 DLK1P80370 383 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 RUNX1Q01196 453 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 WT1-ASQ06250 92 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 LRRC75BQ2VPJ9 315 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 C2orf83Q53S99 150 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 FAM120AOSQ5T036 256 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 WFDC11Q8NEX6 87 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 SCGB1C1Q8TD33 95 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 RNF141Q8WVD5 230 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 SRSF12Q8WXF0 261 aaKnown RBP9.1□□□□□ -0.95
SMAD4-205ENST00000588745 GGACTQ9BVM4 153 aa9.1□□□□□ -0.95
SMAD4-205ENST00000588745 WDR61Q9GZS3 305 aaKnown RBP9.1□□□□□ -0.95
SMAD4-205ENST00000588745 PRRC2AP48634 2157 aaKnown RBP9.09□□□□□ -0.95
SMAD4-205ENST00000588745 CREBBPQ92793 2442 aa9.09□□□□□ -0.95
SMAD4-205ENST00000588745 LINC00862A6NCI5 91 aa9.09□□□□□ -0.95
SMAD4-205ENST00000588745 TEX22C9J3V5 150 aa9.09□□□□□ -0.95
SMAD4-205ENST00000588745 FCN1O00602 326 aa9.09□□□□□ -0.95
SMAD4-205ENST00000588745 FAM157CP0CG43 387 aa9.09□□□□□ -0.95
SMAD4-205ENST00000588745 TUSC1Q2TAM9 212 aa9.09□□□□□ -0.95
SMAD4-205ENST00000588745 SLC7A5P1Q8MH63 180 aa9.09□□□□□ -0.95
SMAD4-205ENST00000588745 ZNF114Q8NC26 417 aa9.09□□□□□ -0.95
SMAD4-205ENST00000588745 CXorf58Q96LI9 332 aa9.09□□□□□ -0.95
SMAD4-205ENST00000588745 FOXC2Q99958 501 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms