RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ZNF506Q5JVG8 444 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 HES4Q9HCC6 221 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 NAT8Q9UHE5 227 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 KALRNO60229 2985 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 EPG5Q9HCE0 2579 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 TRBV6-6A0A0A6YYG2 114 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 DIAPH2-AS1Q14236 149 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 MUC15Q8N387 334 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 OR1B1Q8NGR6 318 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 TOLLIPQ9H0E2 274 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 GAR1Q9NY12 217 aaKnown RBP9.32□□□□□ -0.92
TOP3A-217ENST00000584582 PCSK5Q92824 1860 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 IGHV1-69-2A0A0G2JMI3 117 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 PHOX2AO14813 284 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 MOSP00540 346 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 SSX2Q16385 188 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 C9orf152Q5JTZ5 239 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 ASPHD1Q5U4P2 390 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 STPG3Q8N7X2 389 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 ZNF383Q8NA42 475 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 OR2T6Q8NHC8 308 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 COL5A1P20908 1838 aaPredicted RBP9.31□□□□□ -0.92
TOP3A-217ENST00000584582 TRBV23-1A0A0A0MS06 115 aa9.31□□□□□ -0.92
TOP3A-217ENST00000584582 FAM90A26D6RGX4 464 aa9.31□□□□□ -0.92
TOP3A-217ENST00000584582 RHOBP62745 196 aa9.31□□□□□ -0.92
TOP3A-217ENST00000584582 TBR1Q16650 682 aa9.31□□□□□ -0.92
TOP3A-217ENST00000584582 GFI1BQ5VTD9 330 aa9.31□□□□□ -0.92
TOP3A-217ENST00000584582 OR9G1Q8NH87 305 aa9.31□□□□□ -0.92
TOP3A-217ENST00000584582 ZNF835Q9Y2P0 537 aa9.31□□□□□ -0.92
TOP3A-217ENST00000584582 IGHV3OR16-8A0A075B7F1 116 aa9.31□□□□□ -0.92
TOP3A-217ENST00000584582 SAA1P0DJI8 122 aaPredicted RBP9.31□□□□□ -0.92
TOP3A-217ENST00000584582 TIMP3P35625 211 aa9.31□□□□□ -0.92
TOP3A-217ENST00000584582 RANP62826 216 aaKnown RBP9.31□□□□□ -0.92
TOP3A-217ENST00000584582 UBE2L3P68036 154 aaKnown RBP9.31□□□□□ -0.92
TOP3A-217ENST00000584582 FXYD3Q14802 87 aa9.31□□□□□ -0.92
TOP3A-217ENST00000584582 C19orf35Q6ZS72 473 aa9.31□□□□□ -0.92
TOP3A-217ENST00000584582 NPIPB3Q92617 1050 aa9.31□□□□□ -0.92
TOP3A-217ENST00000584582 IFI27L2Q9H2X8 130 aa9.31□□□□□ -0.92
TOP3A-217ENST00000584582 IFT22Q9H7X7 185 aa9.31□□□□□ -0.92
TOP3A-217ENST00000584582 KBTBD11O94819 623 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 SCGB1D1O95968 90 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 CGAP01215 116 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 RPL8P62917 257 aaKnown RBP9.3□□□□□ -0.92
TOP3A-217ENST00000584582 VMA21Q3ZAQ7 101 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 SGMS2Q8NHU3 365 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 FAM103A1Q9BTL3 118 aaKnown RBP9.3□□□□□ -0.92
TOP3A-217ENST00000584582 IGLV1-44P01699 117 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 SRSF7Q16629 238 aaKnown RBP eCLIP9.3□□□□□ -0.92
TOP3A-217ENST00000584582 OR4X1Q8NH49 305 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 RNASE6Q93091 150 aaKnown RBP9.3□□□□□ -0.92
TOP3A-217ENST00000584582 SAMD10Q9BYL1 202 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 MIOXQ9UGB7 285 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 PRNDQ9UKY0 176 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 SCO2A0A1W2PP80 73 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 C15orf62A8K5M9 175 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 SLC17A3O00476 420 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 YPEL1O60688 119 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 LY86O95711 162 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 IL3RAP26951 378 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 CRYBB3P26998 211 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 RND2P52198 227 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 MMDQ15546 238 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 TMEM14EPQ6UXP3 125 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 YPEL2Q96QA6 119 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 UBTD1Q9HAC8 227 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 SEPSECSQ9HD40 501 aaKnown RBP9.3□□□□□ -0.92
TOP3A-217ENST00000584582 TACC2O95359 2948 aa9.3□□□□□ -0.92
TOP3A-217ENST00000584582 XKRY2A2RUG3 117 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 IL6RP08887 468 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-217ENST00000584582 C1QTNF9P0C862 333 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 LMO1P25800 156 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 TIGITQ495A1 244 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 MIR17HGQ75NE6 70 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 BAGE3Q86Y29 109 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 BAGE2Q86Y30 109 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 OR2T10Q8NGZ9 312 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 TIMD4Q96H15 378 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 ADTRPQ96IZ2 230 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 GAFA1Q96PS6 74 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 ABCA2Q9BZC7 2435 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 FOXH1O75593 365 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 LINC00869P0C866 280 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 TRGC1P0CF51 173 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 OR5I1Q13606 314 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 GAMTQ14353 236 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 ODF3L1Q8IXM7 274 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 OR1L8Q8NGR8 309 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 AGMATQ9BSE5 352 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 PSMG3Q9BT73 122 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-217ENST00000584582 C15orf65H3BRN8 121 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 SUB1P53999 127 aaKnown RBP eCLIP9.29□□□□□ -0.92
TOP3A-217ENST00000584582 LYZP61626 148 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 S100A12P80511 92 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 TMEM200BQ69YZ2 307 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 MRPL54Q6P161 138 aaKnown RBP9.29□□□□□ -0.92
TOP3A-217ENST00000584582 TREML4Q6UXN2 200 aa9.29□□□□□ -0.92
TOP3A-217ENST00000584582 IGHV3OR16-10A0A075B7F0 116 aa9.28□□□□□ -0.92
TOP3A-217ENST00000584582 ZNF729A6NN14 1252 aaPredicted RBP9.28□□□□□ -0.92
TOP3A-217ENST00000584582 CDKN1AP38936 164 aa9.28□□□□□ -0.92
TOP3A-217ENST00000584582 LEMD1Q68G75 181 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms