RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 VWFP04275 2813 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 ARG1P05089 322 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 FGF2P09038 288 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 S100A1P23297 94 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 LGALS7P47929 136 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 REG1BP48304 166 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 HOXA1P49639 335 aaPredicted RBP8.16□□□□□ -1.1
SS18-207ENST00000577636 LGALS4P56470 323 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 OR2B8PP59922 312 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 NHLH2Q02577 135 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 PAX2Q02962 417 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 POU2AF1Q16633 256 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 VMA21Q3ZAQ7 101 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 TMEM177Q53S58 311 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 SPANXN5Q5MJ07 72 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 RPL7L1Q6DKI1 246 aaKnown RBP8.16□□□□□ -1.1
SS18-207ENST00000577636 OR4A47Q6IF82 309 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 MOB3BQ86TA1 216 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 ZNF429Q86V71 674 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 LILRB2Q8N423 598 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 C11orf42Q8N5U0 333 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 UBAC2Q8NBM4 344 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 OR11H6Q8NGC7 330 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 OR5C1Q8NGR4 320 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 OR4A5Q8NH83 315 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 LINC01006Q8NI28 216 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 SCGB1C1Q8TD33 95 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 RNF141Q8WVD5 230 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 NABP2Q9BQ15 211 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 QTRT1Q9BXR0 403 aaKnown RBP8.16□□□□□ -1.1
SS18-207ENST00000577636 C11orf1Q9H5F2 150 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 HEYLQ9NQ87 328 aaPredicted RBP8.16□□□□□ -1.1
SS18-207ENST00000577636 CYTL1Q9NRR1 136 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 PFDN2Q9UHV9 154 aa8.16□□□□□ -1.1
SS18-207ENST00000577636 WNK1Q9H4A3 2382 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 IGSF23A1L1A6 192 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 C15orf61A6NNL5 157 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 G3V4G9 280 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 H3BP45 60 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 CST7O76096 145 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 IGLV1-47P01700 117 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 OR9G9P0C7N8 305 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 DYNLT3P51808 116 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 CLINT1Q14677 625 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 ATP6V1FQ16864 119 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 AARDQ4LEZ3 155 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 CCDC144NLQ6NUI1 221 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 MRPL41Q8IXM3 137 aaKnown RBP8.15□□□□□ -1.1
SS18-207ENST00000577636 VKORC1L1Q8N0U8 176 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 TMEM217Q8N7C4 229 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 ST6GALNAC6Q969X2 333 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 PINX1Q96BK5 328 aaKnown RBP8.15□□□□□ -1.1
SS18-207ENST00000577636 GNPNAT1Q96EK6 184 aaPredicted RBP8.15□□□□□ -1.1
SS18-207ENST00000577636 ATP5SQ99766 215 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 COMMD5Q9GZQ3 224 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 SIRT7Q9NRC8 400 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 BET1LQ9NYM9 111 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 ZNRD1Q9P1U0 126 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 DPM3Q9P2X0 92 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 FOXA2Q9Y261 457 aaPredicted RBP8.15□□□□□ -1.1
SS18-207ENST00000577636 ZNF257Q9Y2Q1 563 aa8.15□□□□□ -1.1
SS18-207ENST00000577636 OOSP1A8MZH6 123 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 UPK2O00526 184 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 KBTBD11O94819 623 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 TOX4O94842 621 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 TMEM50AO95807 157 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 IFNA10P01566 189 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 IGKV1-16P04430 117 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 OR8U8P0C7N1 319 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 SEC11BP0C7V7 166 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 PAX9P55771 341 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 HSPE1P61604 102 aaKnown RBP8.14□□□□□ -1.11
SS18-207ENST00000577636 RAB11AP62491 216 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 TMEM267Q0VDI3 215 aaPredicted RBP8.14□□□□□ -1.11
SS18-207ENST00000577636 VMO1Q7Z5L0 202 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 SLC7A5P1Q8MH63 180 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 Q8N7P7 452 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 OR10P1Q8NGE3 313 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 OR5B3Q8NH48 314 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 TMED6Q8WW62 240 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 SSMEM1Q8WWF3 244 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 HINT2Q9BX68 163 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 PRDM13Q9H4Q3 707 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 PLEKHA3Q9HB20 300 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 OR51B2Q9Y5P1 312 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 KIAA2026Q5HYC2 2103 aa8.14□□□□□ -1.11
SS18-207ENST00000577636 IGHV1-3A0A0C4DH29 117 aa8.13□□□□□ -1.11
SS18-207ENST00000577636 CENPVL3A0A0U1RRI6 287 aa8.13□□□□□ -1.11
SS18-207ENST00000577636 LINC00862A6NCI5 91 aa8.13□□□□□ -1.11
SS18-207ENST00000577636 ACTL6BO94805 426 aa8.13□□□□□ -1.11
SS18-207ENST00000577636 IGHV4-59P01825 116 aa8.13□□□□□ -1.11
SS18-207ENST00000577636 METTL15P1P0C7V9 234 aa8.13□□□□□ -1.11
SS18-207ENST00000577636 SAA1P0DJI8 122 aaPredicted RBP8.13□□□□□ -1.11
SS18-207ENST00000577636 RAB5CP51148 216 aa8.13□□□□□ -1.11
SS18-207ENST00000577636 F2RL1P55085 397 aa8.13□□□□□ -1.11
SS18-207ENST00000577636 ATP5IP56385 69 aaPredicted RBP8.13□□□□□ -1.11
SS18-207ENST00000577636 PROK1P58294 105 aa8.13□□□□□ -1.11
SS18-207ENST00000577636 BPIFB3P59826 476 aa8.13□□□□□ -1.11
SS18-207ENST00000577636 RPL8P62917 257 aaKnown RBP8.13□□□□□ -1.11
SS18-207ENST00000577636 BLOC1S1P78537 153 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms