RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 C16orf92Q96LL3 132 aa14.81□□□□□ -0.04
SYNE3-204ENST00000555759 SSBP4Q9BWG4 385 aaPredicted RBP14.81□□□□□ -0.04
SYNE3-204ENST00000555759 C17orf98A8MV24 154 aa14.81□□□□□ -0.04
SYNE3-204ENST00000555759 C12orf77C9JDV5 145 aa14.81□□□□□ -0.04
SYNE3-204ENST00000555759 IGHV1-69-2A0A0G2JMI3 117 aa14.81□□□□□ -0.04
SYNE3-204ENST00000555759 CCL4P13236 92 aa14.81□□□□□ -0.04
SYNE3-204ENST00000555759 TMEM144Q7Z5S9 345 aa14.81□□□□□ -0.04
SYNE3-204ENST00000555759 OSR1Q8TAX0 266 aaPredicted RBP14.81□□□□□ -0.04
SYNE3-204ENST00000555759 ARRDC1-AS1Q9H2J1 176 aa14.81□□□□□ -0.04
SYNE3-204ENST00000555759 MYO7AQ13402 2215 aa14.81□□□□□ -0.04
SYNE3-204ENST00000555759 C9orf50Q5SZB4 431 aa14.81□□□□□ -0.04
SYNE3-204ENST00000555759 ZNF236Q9UL36 1845 aa14.81□□□□□ -0.04
SYNE3-204ENST00000555759 NHP2Q9NX24 153 aaKnown RBP14.8□□□□□ -0.04
SYNE3-204ENST00000555759 COL11A1P12107 1806 aaPredicted RBP14.8□□□□□ -0.04
SYNE3-204ENST00000555759 KLRB1Q12918 225 aa14.8□□□□□ -0.04
SYNE3-204ENST00000555759 FAM214BQ7L5A3 538 aa14.8□□□□□ -0.04
SYNE3-204ENST00000555759 A0A1W2PS18 150 aa14.8□□□□□ -0.04
SYNE3-204ENST00000555759 C5orf67F2Z3F1 127 aa14.8□□□□□ -0.04
SYNE3-204ENST00000555759 TYMSP04818 313 aa14.8□□□□□ -0.04
SYNE3-204ENST00000555759 PRSS8Q16651 343 aa14.8□□□□□ -0.04
SYNE3-204ENST00000555759 UNQ5815/PRO19632Q6UWF5 114 aa14.8□□□□□ -0.04
SYNE3-204ENST00000555759 LINC00271P0C7V0 271 aa14.8□□□□□ -0.04
SYNE3-204ENST00000555759 TSPOP30536 169 aa14.8□□□□□ -0.04
SYNE3-204ENST00000555759 SLC22A18ASQ8N1D0 253 aa14.8□□□□□ -0.04
SYNE3-204ENST00000555759 SRSF7Q16629 238 aaKnown RBP eCLIP14.79□□□□□ -0.04
SYNE3-204ENST00000555759 SLC25A2Q9BXI2 301 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 KLK15Q9H2R5 256 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 HBDP02042 147 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 C20orf144Q9BQM9 153 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 CYSLTR1Q9Y271 337 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 EREGO14944 169 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 SAMD5Q5TGI4 173 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 OR52E5Q8NH55 327 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 SRXN1Q9BYN0 137 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 RGPD3A6NKT7 1758 aaPredicted RBP14.79□□□□□ -0.04
SYNE3-204ENST00000555759 RGPD4Q7Z3J3 1758 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 C19orf54Q5BKX5 351 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 WDR83OSQ9Y284 106 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 A0A1W2PRD5 423 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 A0A1W2PRF3 423 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 A0A1W2PRM7 423 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 SEMA5BQ9P283 1151 aa14.79□□□□□ -0.04
SYNE3-204ENST00000555759 A0A0A6YYD4 124 aa14.78□□□□□ -0.04
SYNE3-204ENST00000555759 C9JCJ5 164 aa14.78□□□□□ -0.04
SYNE3-204ENST00000555759 FTH1P19P0C7X4 201 aa14.78□□□□□ -0.04
SYNE3-204ENST00000555759 LINC01559Q495D7 138 aa14.78□□□□□ -0.04
SYNE3-204ENST00000555759 KLF14Q8TD94 323 aaPredicted RBP14.78□□□□□ -0.04
SYNE3-204ENST00000555759 ITLN1Q8WWA0 313 aa14.78□□□□□ -0.04
SYNE3-204ENST00000555759 UBTD1Q9HAC8 227 aa14.78□□□□□ -0.04
SYNE3-204ENST00000555759 BEX4Q9NWD9 120 aaPredicted RBP14.78□□□□□ -0.04
SYNE3-204ENST00000555759 C1QTNF5Q9BXJ0 243 aa14.78□□□□□ -0.04
SYNE3-204ENST00000555759 FAM181BA6NEQ2 426 aa14.78□□□□□ -0.04
SYNE3-204ENST00000555759 H3BTX0 84 aa14.78□□□□□ -0.04
SYNE3-204ENST00000555759 MESP2Q0VG99 397 aa14.78□□□□□ -0.04
SYNE3-204ENST00000555759 LINC01551Q86U37 167 aa14.78□□□□□ -0.04
SYNE3-204ENST00000555759 NCOR1P1Q9H4R4 102 aa14.78□□□□□ -0.04
SYNE3-204ENST00000555759 LY96Q9Y6Y9 160 aa14.78□□□□□ -0.04
SYNE3-204ENST00000555759 GFRA1P56159 465 aa14.78□□□□□ -0.04
SYNE3-204ENST00000555759 ECSCRQ19T08 205 aa14.78□□□□□ -0.04
SYNE3-204ENST00000555759 TRAV8-2A0A0B4J237 113 aa14.77□□□□□ -0.04
SYNE3-204ENST00000555759 SS18L1O75177 396 aaPredicted RBP14.77□□□□□ -0.04
SYNE3-204ENST00000555759 APOMO95445 188 aa14.77□□□□□ -0.04
SYNE3-204ENST00000555759 FAM166AQ6J272 317 aa14.77□□□□□ -0.04
SYNE3-204ENST00000555759 TSKUQ8WUA8 353 aa14.77□□□□□ -0.04
SYNE3-204ENST00000555759 SPTBP11277 2137 aa14.77□□□□□ -0.04
SYNE3-204ENST00000555759 GBF1Q92538 1859 aa14.77□□□□□ -0.04
SYNE3-204ENST00000555759 A0A087WV48 116 aa14.77□□□□□ -0.04
SYNE3-204ENST00000555759 IGKV1D-13A0A0B4J2D9 117 aa14.77□□□□□ -0.04
SYNE3-204ENST00000555759 IGKV1-9A0A0C4DH69 117 aa14.77□□□□□ -0.04
SYNE3-204ENST00000555759 IGKV1-13P0DP09 117 aa14.77□□□□□ -0.04
SYNE3-204ENST00000555759 CTSSP25774 331 aa14.77□□□□□ -0.04
SYNE3-204ENST00000555759 OR9G1Q8NH87 305 aa14.77□□□□□ -0.04
SYNE3-204ENST00000555759 SCGB3A1Q96QR1 104 aa14.77□□□□□ -0.04
SYNE3-204ENST00000555759 GPX1P07203 203 aa14.77□□□□□ -0.05
SYNE3-204ENST00000555759 TMEM190Q8WZ59 177 aa14.77□□□□□ -0.05
SYNE3-204ENST00000555759 ZNF479Q96JC4 524 aa14.77□□□□□ -0.05
SYNE3-204ENST00000555759 FAM90A9PA6NNJ1 464 aa14.77□□□□□ -0.05
SYNE3-204ENST00000555759 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.77□□□□□ -0.05
SYNE3-204ENST00000555759 ESDP10768 282 aa14.77□□□□□ -0.05
SYNE3-204ENST00000555759 ERVK11-1P61568 191 aa14.77□□□□□ -0.05
SYNE3-204ENST00000555759 GAGE13Q4V321 117 aa14.77□□□□□ -0.05
SYNE3-204ENST00000555759 C10orf91Q5T1B1 145 aa14.77□□□□□ -0.05
SYNE3-204ENST00000555759 DNAL4O96015 105 aa14.76□□□□□ -0.05
SYNE3-204ENST00000555759 TDHQ8IZJ6 230 aa14.76□□□□□ -0.05
SYNE3-204ENST00000555759 VSIRQ9H7M9 311 aa14.76□□□□□ -0.05
SYNE3-204ENST00000555759 ZNF441Q8N8Z8 693 aa14.76□□□□□ -0.05
SYNE3-204ENST00000555759 MOSP00540 346 aa14.76□□□□□ -0.05
SYNE3-204ENST00000555759 TMEM256Q8N2U0 113 aa14.76□□□□□ -0.05
SYNE3-204ENST00000555759 MRPL27Q9P0M9 148 aaKnown RBP14.76□□□□□ -0.05
SYNE3-204ENST00000555759 HS3ST3B1Q9Y662 390 aa14.76□□□□□ -0.05
SYNE3-204ENST00000555759 TMEM170BQ5T4T1 132 aa14.76□□□□□ -0.05
SYNE3-204ENST00000555759 DNM1P46Q6ZS02 220 aa14.76□□□□□ -0.05
SYNE3-204ENST00000555759 MST1LQ2TV78 715 aa14.76□□□□□ -0.05
SYNE3-204ENST00000555759 REPIN1Q9BWE0 567 aaKnown RBP14.76□□□□□ -0.05
SYNE3-204ENST00000555759 RBBP6Q7Z6E9 1792 aaKnown RBP14.75□□□□□ -0.05
SYNE3-204ENST00000555759 RPL39P5Q59GN2 51 aa14.75□□□□□ -0.05
SYNE3-204ENST00000555759 TEX45Q8NA69 505 aa14.75□□□□□ -0.05
SYNE3-204ENST00000555759 OTORQ9NRC9 128 aa14.75□□□□□ -0.05
SYNE3-204ENST00000555759 DPM2O94777 84 aa14.75□□□□□ -0.05
SYNE3-204ENST00000555759 GAGE1Q13065 139 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms