RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.65□□□□□ -0.06
VPS33A-205ENST00000541169 COA4Q9NYJ1 87 aa14.65□□□□□ -0.06
VPS33A-205ENST00000541169 TRAV3A0A0B4J244 114 aa14.64□□□□□ -0.07
VPS33A-205ENST00000541169 TEX50A0A1B0GTY4 177 aa14.64□□□□□ -0.07
VPS33A-205ENST00000541169 FAM223BA6NKX1 122 aa14.64□□□□□ -0.07
VPS33A-205ENST00000541169 ADARB2-AS1A8MUL3 147 aa14.64□□□□□ -0.07
VPS33A-205ENST00000541169 SOX15O60248 233 aa14.64□□□□□ -0.07
VPS33A-205ENST00000541169 IGKV1-5P01602 117 aa14.64□□□□□ -0.07
VPS33A-205ENST00000541169 TRGV3P03979 118 aa14.64□□□□□ -0.07
VPS33A-205ENST00000541169 TCRBP04435 133 aa14.64□□□□□ -0.07
VPS33A-205ENST00000541169 PSMB6P28072 239 aa14.64□□□□□ -0.07
VPS33A-205ENST00000541169 HSPE1P61604 102 aaKnown RBP14.64□□□□□ -0.07
VPS33A-205ENST00000541169 C10orf55Q5SWW7 151 aa14.64□□□□□ -0.07
VPS33A-205ENST00000541169 ASPHD1Q5U4P2 390 aa14.64□□□□□ -0.07
VPS33A-205ENST00000541169 FAM223AQ8IWN6 122 aa14.64□□□□□ -0.07
VPS33A-205ENST00000541169 KLHL30-AS1Q8NEE0 82 aa14.64□□□□□ -0.07
VPS33A-205ENST00000541169 THYN1Q9P016 225 aa14.64□□□□□ -0.07
VPS33A-205ENST00000541169 TPPP2P59282 170 aa14.63□□□□□ -0.07
VPS33A-205ENST00000541169 KLK9Q2XQG4 91 aa14.63□□□□□ -0.07
VPS33A-205ENST00000541169 AARDQ4LEZ3 155 aa14.63□□□□□ -0.07
VPS33A-205ENST00000541169 NECAP1Q8NC96 275 aa14.63□□□□□ -0.07
VPS33A-205ENST00000541169 OR52E5Q8NH55 327 aa14.63□□□□□ -0.07
VPS33A-205ENST00000541169 C20orf85Q9H1P6 137 aa14.63□□□□□ -0.07
VPS33A-205ENST00000541169 KLK15Q9H2R5 256 aa14.63□□□□□ -0.07
VPS33A-205ENST00000541169 KLK9Q9UKQ9 250 aa14.63□□□□□ -0.07
VPS33A-205ENST00000541169 C13orf42A0A1B0GVH6 325 aa14.62□□□□□ -0.07
VPS33A-205ENST00000541169 A0A1W2PRX2 142 aa14.62□□□□□ -0.07
VPS33A-205ENST00000541169 DUS4LO95620 317 aaKnown RBP14.62□□□□□ -0.07
VPS33A-205ENST00000541169 HLA-AP01891 365 aaKnown RBP14.62□□□□□ -0.07
VPS33A-205ENST00000541169 DEFA4P12838 97 aa14.62□□□□□ -0.07
VPS33A-205ENST00000541169 CTRB1P17538 263 aa14.62□□□□□ -0.07
VPS33A-205ENST00000541169 PRCDQ00LT1 54 aa14.62□□□□□ -0.07
VPS33A-205ENST00000541169 PPP1R1AQ13522 171 aa14.62□□□□□ -0.07
VPS33A-205ENST00000541169 CTRB2Q6GPI1 263 aa14.62□□□□□ -0.07
VPS33A-205ENST00000541169 SLC35G3Q8N808 338 aa14.62□□□□□ -0.07
VPS33A-205ENST00000541169 COQ8AQ8NI60 647 aa14.62□□□□□ -0.07
VPS33A-205ENST00000541169 TBC1D24Q9ULP9 559 aa14.62□□□□□ -0.07
VPS33A-205ENST00000541169 TMED3Q9Y3Q3 217 aa14.62□□□□□ -0.07
VPS33A-205ENST00000541169 TRBV9A0A0B4J1U6 114 aa14.61□□□□□ -0.07
VPS33A-205ENST00000541169 IGLC7A0M8Q6 106 aa14.61□□□□□ -0.07
VPS33A-205ENST00000541169 E7EUB6 86 aa14.61□□□□□ -0.07
VPS33A-205ENST00000541169 INS-IGF2F8WCM5 200 aa14.61□□□□□ -0.07
VPS33A-205ENST00000541169 OR4E1P0C645 316 aa14.61□□□□□ -0.07
VPS33A-205ENST00000541169 SLC25A6P12236 298 aa14.61□□□□□ -0.07
VPS33A-205ENST00000541169 MYCNOSP40205 109 aa14.61□□□□□ -0.07
VPS33A-205ENST00000541169 MECP2P51608 486 aaKnown RBP14.61□□□□□ -0.07
VPS33A-205ENST00000541169 KIAA0141Q14154 515 aaPredicted RBP14.61□□□□□ -0.07
VPS33A-205ENST00000541169 C4orf46Q504U0 113 aa14.61□□□□□ -0.07
VPS33A-205ENST00000541169 TREML4Q6UXN2 200 aa14.61□□□□□ -0.07
VPS33A-205ENST00000541169 LYG2Q86SG7 212 aa14.61□□□□□ -0.07
VPS33A-205ENST00000541169 LHFPL5Q8TAF8 219 aa14.61□□□□□ -0.07
VPS33A-205ENST00000541169 ENKURQ8TC29 256 aa14.61□□□□□ -0.07
VPS33A-205ENST00000541169 NSG2Q9Y328 171 aa14.61□□□□□ -0.07
VPS33A-205ENST00000541169 A0A0B4J293 547 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 A0A1B0GU03 582 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 A0A1B0GW64 132 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 C9orf170A2RU37 121 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 HMX3A6NHT5 357 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 CGB1A6NKQ9 187 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 IFNA17P01571 189 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 PF4P02776 101 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 LGALS1P09382 135 aaKnown RBP14.6□□□□□ -0.07
VPS33A-205ENST00000541169 SULT1A3P0DMM9 295 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 SULT1A4P0DMN0 295 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 SPCS3P61009 180 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 ERHP84090 104 aaKnown RBP14.6□□□□□ -0.07
VPS33A-205ENST00000541169 PDLIM3Q53GG5 364 aaPredicted RBP14.6□□□□□ -0.07
VPS33A-205ENST00000541169 MS4A10Q96PG2 267 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 HINT2Q9BX68 163 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 PLEKHA3Q9HB20 300 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 ENY2Q9NPA8 101 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 NUDT15Q9NV35 164 aa14.6□□□□□ -0.07
VPS33A-205ENST00000541169 I3L521 148 aa14.59□□□□□ -0.07
VPS33A-205ENST00000541169 APELAP0DMC3 54 aa14.59□□□□□ -0.07
VPS33A-205ENST00000541169 OR13C7P0DN81 318 aa14.59□□□□□ -0.07
VPS33A-205ENST00000541169 AREGP15514 252 aa14.59□□□□□ -0.07
VPS33A-205ENST00000541169 DHRS2Q13268 280 aa14.59□□□□□ -0.07
VPS33A-205ENST00000541169 SMCO1Q147U7 214 aa14.59□□□□□ -0.07
VPS33A-205ENST00000541169 NMSQ5H8A3 153 aa14.59□□□□□ -0.07
VPS33A-205ENST00000541169 DUSP18Q8NEJ0 188 aa14.59□□□□□ -0.07
VPS33A-205ENST00000541169 CASTOR1Q8WTX7 329 aa14.59□□□□□ -0.07
VPS33A-205ENST00000541169 PALMDQ9NP74 551 aa14.59□□□□□ -0.07
VPS33A-205ENST00000541169 FLVCR2Q9UPI3 526 aa14.59□□□□□ -0.07
VPS33A-205ENST00000541169 CCL24O00175 119 aa14.58□□□□□ -0.08
VPS33A-205ENST00000541169 ST8SIA3O43173 380 aa14.58□□□□□ -0.08
VPS33A-205ENST00000541169 TSPAN15O95858 294 aa14.58□□□□□ -0.08
VPS33A-205ENST00000541169 IFNA21P01568 189 aa14.58□□□□□ -0.08
VPS33A-205ENST00000541169 H2AFB2P0C5Z0 115 aa14.58□□□□□ -0.08
VPS33A-205ENST00000541169 OR8U8P0C7N1 319 aa14.58□□□□□ -0.08
VPS33A-205ENST00000541169 SUB1P53999 127 aaKnown RBP eCLIP14.58□□□□□ -0.08
VPS33A-205ENST00000541169 RHOGP84095 191 aa14.58□□□□□ -0.08
VPS33A-205ENST00000541169 ATP5G2Q06055 141 aa14.58□□□□□ -0.08
VPS33A-205ENST00000541169 LCNL1Q6ZST4 164 aa14.58□□□□□ -0.08
VPS33A-205ENST00000541169 ZNF114Q8NC26 417 aa14.58□□□□□ -0.08
VPS33A-205ENST00000541169 GPR146Q96CH1 333 aa14.58□□□□□ -0.08
VPS33A-205ENST00000541169 CXorf58Q96LI9 332 aa14.58□□□□□ -0.08
VPS33A-205ENST00000541169 CACNG5Q9UF02 275 aa14.58□□□□□ -0.08
VPS33A-205ENST00000541169 MYOD1P15172 320 aa14.57□□□□□ -0.08
VPS33A-205ENST00000541169 ANXA7P20073 488 aaKnown RBP14.57□□□□□ -0.08
VPS33A-205ENST00000541169 SNCAP37840 140 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms