RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 FGF13Q92913 245 aa1.5□□□□□ -2.17
RNU6-840P-201ENST00000517275 MRPS24Q96EL2 167 aaKnown RBP1.5□□□□□ -2.17
RNU6-840P-201ENST00000517275 KLF6Q99612 283 aaPredicted RBP1.5□□□□□ -2.17
RNU6-840P-201ENST00000517275 SIGMAR1Q99720 223 aa1.5□□□□□ -2.17
RNU6-840P-201ENST00000517275 OR8D2Q9GZM6 311 aa1.5□□□□□ -2.17
RNU6-840P-201ENST00000517275 FUT9Q9Y231 359 aa1.5□□□□□ -2.17
RNU6-840P-201ENST00000517275 ADGRB3O60242 1522 aa1.5□□□□□ -2.17
RNU6-840P-201ENST00000517275 NYNRINQ9P2P1 1898 aaKnown RBP1.5□□□□□ -2.17
RNU6-840P-201ENST00000517275 NEO1Q92859 1461 aa1.5□□□□□ -2.17
RNU6-840P-201ENST00000517275 PIK3C2GO75747 1445 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 ROBO3Q96MS0 1386 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 TRAV41A0A0B4J266 112 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 EXOC1LA0A1B0GW35 172 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 FABP5P3A8MUU1 101 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 C3orf84H3BNL1 204 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 CREBL2O60519 120 aaPredicted RBP1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 SERPINA1P01009 418 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 MSMBP08118 114 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 EVX1P49640 407 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 TPI1P60174 286 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 RAB14P61106 215 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 ZNF181Q2M3W8 571 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 C12orf74Q32Q52 190 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 LIN52Q52LA3 116 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 DHRS4L2Q6PKH6 230 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 Q6ZTI0 123 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 SLC36A1Q7Z2H8 476 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 PXT1Q8NFP0 134 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 OR51A2Q8NGJ7 313 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 C2orf50Q96LR7 162 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 IMMP2LQ96T52 175 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 DERL1Q9BUN8 251 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 C9orf16Q9BUW7 83 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 TMEM147Q9BVK8 224 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 CHST6Q9GZX3 395 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 RNASE7Q9H1E1 156 aaKnown RBP1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 VCX3BQ9H321 246 aa1.49□□□□□ -2.17
RNU6-840P-201ENST00000517275 CACNA1SQ13698 1873 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 MYO16Q9Y6X6 1858 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 IGKV1D-43A0A0B4J1Z2 117 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 TRGV4A0A0C4DH28 118 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 IGHV1-18A0A0C4DH31 117 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 FAM159BA6NKW6 160 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 H7C2G1 150 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 SULT1B1O43704 296 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 S1PR2O95136 353 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 IFNA10P01566 189 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 IGKV1-5P01602 117 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 IGHV3-7P01780 117 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 SERPINA7P05543 415 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 C8GP07360 202 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 LGALS1P09382 135 aaKnown RBP1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 RBP1P09455 135 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 NFYAP23511 347 aaPredicted RBP1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 HIST1H2BOP23527 126 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 HIST1H2BBP33778 126 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 CCR2P41597 374 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 RPL28P46779 137 aaKnown RBP1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 ZNF80P51504 273 aaPredicted RBP1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 FXYD2P54710 66 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 HIST1H2BDP58876 126 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 HIST1H2BCP62807 126 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 HBA1P69905 142 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 HIST2H2BEQ16778 126 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 ZNF791Q3KP31 576 aaPredicted RBP1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 RASSF5Q8WWW0 418 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 ACOT12Q8WYK0 555 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 HIST1H2BHQ93079 126 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 DGCR14Q96DF8 476 aaKnown RBP1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 HIST1H2BNQ99877 126 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 HIST1H2BMQ99879 126 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 PRRT1Q99946 306 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 KIFC1Q9BW19 673 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 UQCC1Q9NVA1 299 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 ARMC1Q9NVT9 282 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 TIMM9Q9Y5J7 89 aa1.48□□□□□ -2.17
RNU6-840P-201ENST00000517275 SIPA1L1O43166 1804 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 LTBP2Q14767 1821 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 TTC21AQ8NDW8 1320 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 ZNF532Q9HCE3 1301 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 SCN9AQ15858 1988 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 TRAV9-1A0A075B6T8 112 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 C1QBP02746 253 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 BPGMP07738 259 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 SULT1A3P0DMM9 295 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 SULT1A4P0DMN0 295 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 CSRP1P21291 193 aaKnown RBP1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 MSNP26038 577 aaKnown RBP1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 HLA-DMBP28068 263 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 MAGEA12P43365 314 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 HSPE1P61604 102 aaKnown RBP1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 RELAQ04206 551 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 GLO1Q04760 184 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 TPRXLQ17RH7 258 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 AADACL3Q5VUY0 350 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 ZNF705AQ6ZN79 300 aaPredicted RBP1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 SLC35E3Q7Z769 313 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 KRT222Q8N1A0 295 aa1.47□□□□□ -2.17
RNU6-840P-201ENST00000517275 H1FXQ92522 213 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms