RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 RAX2Q96IS3 184 aa11.65□□□□□ -0.54
RNF4-210ENST00000508235 P2RX4Q99571 388 aa11.65□□□□□ -0.54
RNF4-210ENST00000508235 GNB4Q9HAV0 340 aa11.65□□□□□ -0.54
RNF4-210ENST00000508235 NSG2Q9Y328 171 aa11.65□□□□□ -0.54
RNF4-210ENST00000508235 LINC00854A0A1B0GVQ3 168 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 A0A1B0GW64 132 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 NDUFB6O95139 128 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 DUS4LO95620 317 aaKnown RBP11.64□□□□□ -0.55
RNF4-210ENST00000508235 OR8U8P0C7N1 319 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 DEFA4P12838 97 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 MYOD1P15172 320 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 AREGP15514 252 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 FAM209BQ5JX69 171 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 ETV3LQ6ZN32 361 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 ZNF429Q86V71 674 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 CENPSQ8N2Z9 138 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 NECAP1Q8NC96 275 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 WFDC9Q8NEX5 89 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 OR11H1Q8NG94 326 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 OR1N2Q8NGR9 330 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 DPF1Q92782 380 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 PDCD10Q9BUL8 212 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 NDUFA4L2Q9NRX3 87 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 TMEM56-RWDD3S4R434 201 aa11.64□□□□□ -0.55
RNF4-210ENST00000508235 TRBV9A0A0B4J1U6 114 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 IGLC7A0M8Q6 106 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 CGB1A6NKQ9 187 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 IGKV1-5P01602 117 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 CTRB1P17538 263 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 MECP2P51608 486 aaKnown RBP11.63□□□□□ -0.55
RNF4-210ENST00000508235 CCR6P51684 374 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 UBE2MP61081 183 aaKnown RBP11.63□□□□□ -0.55
RNF4-210ENST00000508235 RHOGP84095 191 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 ATP5G2Q06055 141 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 ZNF616Q08AN1 781 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 TMEM187Q14656 261 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 DEFB136Q30KP8 78 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 TMEM268Q5VZI3 342 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 CTRB2Q6GPI1 263 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 LGI3Q8N145 548 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 LINC00482Q8N8I6 264 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 RCC1LQ96I51 464 aaKnown RBP11.63□□□□□ -0.55
RNF4-210ENST00000508235 OR5B12Q96R08 314 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 MCRIP2Q9BUT9 160 aaKnown RBP11.63□□□□□ -0.55
RNF4-210ENST00000508235 HINT2Q9BX68 163 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 THYN1Q9P016 225 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 CACFD1Q9UGQ2 172 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 WNK1Q9H4A3 2382 aa11.63□□□□□ -0.55
RNF4-210ENST00000508235 LYRM1O43325 122 aa11.62□□□□□ -0.55
RNF4-210ENST00000508235 IGHV3-11P01762 117 aa11.62□□□□□ -0.55
RNF4-210ENST00000508235 HSPB1P04792 205 aaKnown RBP11.62□□□□□ -0.55
RNF4-210ENST00000508235 P0C879 139 aa11.62□□□□□ -0.55
RNF4-210ENST00000508235 VAMP1P23763 118 aa11.62□□□□□ -0.55
RNF4-210ENST00000508235 HSPE1P61604 102 aaKnown RBP11.62□□□□□ -0.55
RNF4-210ENST00000508235 FHL3Q13643 280 aa11.62□□□□□ -0.55
RNF4-210ENST00000508235 SELENOHQ8IZQ5 122 aaKnown RBP11.62□□□□□ -0.55
RNF4-210ENST00000508235 OR1L6Q8NGR2 347 aa11.62□□□□□ -0.55
RNF4-210ENST00000508235 DUX3Q96PT4 197 aa11.62□□□□□ -0.55
RNF4-210ENST00000508235 GPR61Q9BZJ8 451 aa11.62□□□□□ -0.55
RNF4-210ENST00000508235 DUXBA0A1W2PPF3 345 aa11.61□□□□□ -0.55
RNF4-210ENST00000508235 LINC01619G3V211 115 aa11.61□□□□□ -0.55
RNF4-210ENST00000508235 PRH1P02810 166 aa11.61□□□□□ -0.55
RNF4-210ENST00000508235 OR13C7P0DN81 318 aa11.61□□□□□ -0.55
RNF4-210ENST00000508235 RAB25P57735 213 aa11.61□□□□□ -0.55
RNF4-210ENST00000508235 SUPT4H1P63272 117 aaKnown RBP11.61□□□□□ -0.55
RNF4-210ENST00000508235 PRCDQ00LT1 54 aa11.61□□□□□ -0.55
RNF4-210ENST00000508235 KLK9Q2XQG4 91 aa11.61□□□□□ -0.55
RNF4-210ENST00000508235 ZNF343Q6P1L6 599 aa11.61□□□□□ -0.55
RNF4-210ENST00000508235 OR10W1Q8NGF6 305 aa11.61□□□□□ -0.55
RNF4-210ENST00000508235 LHFPL5Q8TAF8 219 aa11.61□□□□□ -0.55
RNF4-210ENST00000508235 PLEKHA3Q9HB20 300 aa11.61□□□□□ -0.55
RNF4-210ENST00000508235 RANGRFQ9HD47 186 aaPredicted RBP11.61□□□□□ -0.55
RNF4-210ENST00000508235 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.61□□□□□ -0.55
RNF4-210ENST00000508235 FBXL7Q9UJT9 491 aa11.61□□□□□ -0.55
RNF4-210ENST00000508235 KLK9Q9UKQ9 250 aa11.61□□□□□ -0.55
RNF4-210ENST00000508235 A0A0B4J293 547 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 A0A0B4J2A0 478 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 DBX1A6NMT0 343 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 PLA2G10O15496 165 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 OR2J3O76001 311 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 SFT2D2O95562 160 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 IFNA17P01571 189 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 REG1AP05451 166 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 ZP3P21754 424 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 BTCP35070 178 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 ERHP84090 104 aaKnown RBP11.6□□□□□ -0.55
RNF4-210ENST00000508235 WT1-ASQ06250 92 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 C15orf32Q32M92 178 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 MZT2BQ6NZ67 158 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 SLC35G3Q8N808 338 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 CXorf58Q96LI9 332 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 ALX4Q9H161 411 aaPredicted RBP11.6□□□□□ -0.55
RNF4-210ENST00000508235 SHPKQ9UHJ6 478 aa11.6□□□□□ -0.55
RNF4-210ENST00000508235 IGLV11-55A0A075B6I3 123 aa11.59□□□□□ -0.55
RNF4-210ENST00000508235 ST8SIA3O43173 380 aa11.59□□□□□ -0.55
RNF4-210ENST00000508235 UPK1BO75841 260 aa11.59□□□□□ -0.55
RNF4-210ENST00000508235 PPP1R1AQ13522 171 aa11.59□□□□□ -0.55
RNF4-210ENST00000508235 EXOSC2Q13868 293 aaKnown RBP11.59□□□□□ -0.55
RNF4-210ENST00000508235 IZUMO4Q1ZYL8 232 aa11.59□□□□□ -0.55
RNF4-210ENST00000508235 OR52E5Q8NH55 327 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms