RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ONECUT1Q9UBC0 465 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 PGPEP1LA6NFU8 196 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 UMODP07911 640 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 GCSHP23434 173 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 LPAR2Q9HBW0 351 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 AP5S1Q9NUS5 200 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 WDR83OSQ9Y284 106 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 CEACAM3P40198 252 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 FOXA3P55318 350 aaPredicted RBP14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 BHLHA15Q7RTS1 189 aaPredicted RBP14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 VKORC1L1Q8N0U8 176 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 SHISA5Q8N114 240 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 DPF1Q92782 380 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 SEMA5BQ9P283 1151 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 SOX21Q9Y651 276 aaPredicted RBP14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 SMIM17P0DL12 118 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 A0A1W2PRS3 328 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 A1L4Q6 167 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 NKX2-8O15522 239 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 LYPD6BQ8NI32 183 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 CALYQ9NYX4 217 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 ORM1P02763 201 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 PFN1P07737 140 aaKnown RBP14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 CRYGSP22914 178 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 ST6GALNAC6Q969X2 333 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 NLRC5Q86WI3 1866 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 ZIC3O60481 467 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 SSTR5P35346 364 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 TCTAP57738 103 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 ST6GALNAC3Q8NDV1 305 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 FAM131CQ96AQ9 280 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 ELOVL5Q9NYP7 299 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 PLAUP00749 431 aa14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 PNRC2Q9NPJ4 139 aaKnown RBP14.5□□□□□ -0.09
HMGXB3-201ENST00000502717 CLPSP04118 112 aa14.49□□□□□ -0.09
HMGXB3-201ENST00000502717 COX6A1P12074 109 aa14.49□□□□□ -0.09
HMGXB3-201ENST00000502717 HGFACQ04756 655 aa14.49□□□□□ -0.09
HMGXB3-201ENST00000502717 WBP1Q96G27 269 aa14.49□□□□□ -0.09
HMGXB3-201ENST00000502717 SCNM1Q9BWG6 230 aa14.49□□□□□ -0.09
HMGXB3-201ENST00000502717 C20orf144Q9BQM9 153 aa14.49□□□□□ -0.09
HMGXB3-201ENST00000502717 TMSB15BA0A087X1C1 80 aa14.49□□□□□ -0.09
HMGXB3-201ENST00000502717 PRR19A6NJB7 356 aa14.49□□□□□ -0.09
HMGXB3-201ENST00000502717 SRSF9Q13242 221 aaKnown RBP eCLIP14.49□□□□□ -0.09
HMGXB3-201ENST00000502717 FAM222BQ8WU58 562 aa14.49□□□□□ -0.09
HMGXB3-201ENST00000502717 TNFRSF19Q9NS68 423 aa14.49□□□□□ -0.09
HMGXB3-201ENST00000502717 A0A1W2PQM1 296 aa14.49□□□□□ -0.09
HMGXB3-201ENST00000502717 TMEM189A5PLL7 270 aa14.49□□□□□ -0.09
HMGXB3-201ENST00000502717 A0A1B0GV72 72 aa14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 IGFBP2P18065 325 aa14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 C1orf185Q5T7R7 199 aa14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 TMEM136Q6ZRR5 245 aa14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 GNG7O60262 68 aa14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 CKS2P33552 79 aa14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 LDLRAD2Q5SZI1 272 aa14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 MTURNQ8N3F0 131 aa14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 RNASE7Q9H1E1 156 aaKnown RBP14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 ZNF703Q9H7S9 590 aaPredicted RBP14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 MPDZO75970 2070 aa14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 ATRXP46100 2492 aa14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 IGKV1-27A0A075B6S5 117 aa14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 IFNL4K9M1U5 179 aa14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 IL15RAQ13261 267 aa14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 ORAOV1Q8WV07 137 aa14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 SPOCK3Q9BQ16 436 aa14.48□□□□□ -0.09
HMGXB3-201ENST00000502717 KIR2DL2P43627 348 aaPredicted RBP14.47□□□□□ -0.09
HMGXB3-201ENST00000502717 SLC25A10Q9UBX3 287 aaPredicted RBP14.47□□□□□ -0.09
HMGXB3-201ENST00000502717 RALYQ9UKM9 306 aaKnown RBP14.47□□□□□ -0.09
HMGXB3-201ENST00000502717 NCBP2LA6PVI3 153 aaKnown RBP14.47□□□□□ -0.09
HMGXB3-201ENST00000502717 EFNA2O43921 213 aa14.47□□□□□ -0.09
HMGXB3-201ENST00000502717 TMEM14EPQ6UXP3 125 aa14.47□□□□□ -0.09
HMGXB3-201ENST00000502717 UFC1Q9Y3C8 167 aa14.47□□□□□ -0.09
HMGXB3-201ENST00000502717 KLF7O75840 302 aaPredicted RBP14.47□□□□□ -0.09
HMGXB3-201ENST00000502717 SMIM13P0DJ93 91 aa14.47□□□□□ -0.09
HMGXB3-201ENST00000502717 HERVK_113P61574 105 aa14.47□□□□□ -0.09
HMGXB3-201ENST00000502717 MIR17HGQ75NE6 70 aa14.47□□□□□ -0.09
HMGXB3-201ENST00000502717 POLR3KQ9Y2Y1 108 aaPredicted RBP14.47□□□□□ -0.09
HMGXB3-201ENST00000502717 HOXA4Q00056 320 aaPredicted RBP14.47□□□□□ -0.09
HMGXB3-201ENST00000502717 SRSF12Q8WXF0 261 aaKnown RBP14.47□□□□□ -0.09
HMGXB3-201ENST00000502717 PLPPR1Q8TBJ4 325 aa14.46□□□□□ -0.09
HMGXB3-201ENST00000502717 NEU1Q99519 415 aa14.46□□□□□ -0.09
HMGXB3-201ENST00000502717 FNDC1Q4ZHG4 1894 aaPredicted RBP14.46□□□□□ -0.09
HMGXB3-201ENST00000502717 PEX7O00628 323 aa14.46□□□□□ -0.09
HMGXB3-201ENST00000502717 KLF14Q8TD94 323 aaPredicted RBP14.46□□□□□ -0.09
HMGXB3-201ENST00000502717 IGLV3-12A0A075B6K2 115 aa14.46□□□□□ -0.09
HMGXB3-201ENST00000502717 TRAV24A0A0B4J272 114 aa14.46□□□□□ -0.09
HMGXB3-201ENST00000502717 TIAF1O95411 115 aa14.46□□□□□ -0.09
HMGXB3-201ENST00000502717 UBE2V1Q13404 147 aa14.46□□□□□ -0.09
HMGXB3-201ENST00000502717 TMEM238LA0A1B0GVL6 79 aa14.46□□□□□ -0.1
HMGXB3-201ENST00000502717 A6NJY4 79 aa14.46□□□□□ -0.1
HMGXB3-201ENST00000502717 GPR183P32249 361 aa14.46□□□□□ -0.1
HMGXB3-201ENST00000502717 Q6ZS49 121 aa14.46□□□□□ -0.1
HMGXB3-201ENST00000502717 C1orf147Q96MC9 270 aaPredicted RBP14.46□□□□□ -0.1
HMGXB3-201ENST00000502717 ABCA7Q8IZY2 2146 aa14.46□□□□□ -0.1
HMGXB3-201ENST00000502717 STAG3L3P0CL85 134 aa14.45□□□□□ -0.1
HMGXB3-201ENST00000502717 NABP1Q96AH0 204 aa14.45□□□□□ -0.1
HMGXB3-201ENST00000502717 ST20Q9HBF5 79 aa14.45□□□□□ -0.1
HMGXB3-201ENST00000502717 RALGAPA1Q6GYQ0 2036 aa14.45□□□□□ -0.1
HMGXB3-201ENST00000502717 RPL27AP46776 148 aaKnown RBP14.45□□□□□ -0.1
HMGXB3-201ENST00000502717 TWIST1Q15672 202 aa14.45□□□□□ -0.1
HMGXB3-201ENST00000502717 ZNF497Q6ZNH5 498 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms