RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 K7EN84 100 aa13.21□□□□□ -0.3
SEMA4D-220ENST00000492386 LINC00869P0C866 280 aa13.21□□□□□ -0.3
SEMA4D-220ENST00000492386 CCKARP32238 428 aa13.21□□□□□ -0.3
SEMA4D-220ENST00000492386 RAB31Q13636 194 aa13.21□□□□□ -0.3
SEMA4D-220ENST00000492386 LINC00574Q9H8X3 128 aa13.21□□□□□ -0.3
SEMA4D-220ENST00000492386 PARD6AQ9NPB6 346 aa13.21□□□□□ -0.3
SEMA4D-220ENST00000492386 CACNA1HO95180 2353 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 ICE1Q9Y2F5 2266 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 ZNF705GA8MUZ8 300 aaPredicted RBP13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 FNDC10F2Z333 226 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 MMP23AO75900 390 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 GNG10P50151 68 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 ZNF600Q6ZNG1 722 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 ZADH2Q8N4Q0 377 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 HINT2Q9BX68 163 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 A0A1B0GUS0 222 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 IGHV1-46P01743 117 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 YPEL3P61236 119 aaPredicted RBP13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 HLA-DRB5Q30154 266 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 TMEM256Q8N2U0 113 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 DEFB108BQ8NET1 73 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 OR4P4Q8NGL7 312 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 WFIKKN1Q96NZ8 548 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 PRNDQ9UKY0 176 aa13.2□□□□□ -0.3
SEMA4D-220ENST00000492386 PLCE1Q9P212 2302 aa13.19□□□□□ -0.3
SEMA4D-220ENST00000492386 TNCP24821 2201 aa13.19□□□□□ -0.3
SEMA4D-220ENST00000492386 OTOGLQ3ZCN5 2332 aa13.19□□□□□ -0.3
SEMA4D-220ENST00000492386 YLPM1P49750 1951 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-220ENST00000492386 TNFAIP6P98066 277 aaPredicted RBP13.19□□□□□ -0.3
SEMA4D-220ENST00000492386 MIR17HGQ75NE6 70 aa13.19□□□□□ -0.3
SEMA4D-220ENST00000492386 MRPL41Q8IXM3 137 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-220ENST00000492386 FAM216BQ8N7L0 139 aa13.19□□□□□ -0.3
SEMA4D-220ENST00000492386 FAM122AQ96E09 287 aa13.19□□□□□ -0.3
SEMA4D-220ENST00000492386 NOL4LQ96MY1 436 aaPredicted RBP13.19□□□□□ -0.3
SEMA4D-220ENST00000492386 CCL13Q99616 98 aa13.19□□□□□ -0.3
SEMA4D-220ENST00000492386 SLC45A2Q9UMX9 530 aa13.19□□□□□ -0.3
SEMA4D-220ENST00000492386 ZNF257Q9Y2Q1 563 aa13.19□□□□□ -0.3
SEMA4D-220ENST00000492386 NUPR1O60356 82 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 MT-CO2P00403 227 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 IGKV1-16P04430 117 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 CT45A6P0DMU7 189 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 CT45A5P0DMU8 189 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 CT45A7P0DMV0 189 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 PRCDQ00LT1 54 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 ZNF788Q6ZQV5 615 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 C22orf34Q6ZV56 151 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 SFXN3Q9BWM7 321 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 IL19Q9UHD0 177 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 DYSFO75923 2080 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 SRRM4A7MD48 611 aaKnown RBP13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 C9JCJ5 164 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 J3QR06 171 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 UPK2O00526 184 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 AREGP15514 252 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 ADMP35318 185 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 SLC25A48Q6ZT89 311 aaKnown RBP13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 MOB3BQ86TA1 216 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 PLEKHA3Q9HB20 300 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 IL36BQ9NZH7 164 aa13.18□□□□□ -0.3
SEMA4D-220ENST00000492386 ACTL6BO94805 426 aa13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 SSX2Q16385 188 aa13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 CORO2AQ92828 525 aa13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 SNRNP40Q96DI7 357 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 UHRF2Q96PU4 802 aa13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 ZNRD1Q9P1U0 126 aa13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 SLC25A10Q9UBX3 287 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 RPUSD1Q9UJJ7 312 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 LY96Q9Y6Y9 160 aa13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 IGKV1OR2-108A0A075B7D4 117 aa13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 SLC17A3O00476 420 aa13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 C1orf185Q5T7R7 199 aa13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 EAF1Q96JC9 268 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 LRFN3Q9BTN0 628 aa13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 TP53TG5Q9Y2B4 290 aa13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 BOD1L1Q8NFC6 3051 aa13.17□□□□□ -0.3
SEMA4D-220ENST00000492386 EP300Q09472 2414 aaPredicted RBP13.16□□□□□ -0.3
SEMA4D-220ENST00000492386 TRAV9-1A0A075B6T8 112 aa13.16□□□□□ -0.3
SEMA4D-220ENST00000492386 A0A1B0GV90 55 aa13.16□□□□□ -0.3
SEMA4D-220ENST00000492386 OR4A8P0C604 315 aa13.16□□□□□ -0.3
SEMA4D-220ENST00000492386 IGFL3Q6UXB1 125 aa13.16□□□□□ -0.3
SEMA4D-220ENST00000492386 NABP2Q9BQ15 211 aa13.16□□□□□ -0.3
SEMA4D-220ENST00000492386 DCAF16Q9NXF7 216 aa13.16□□□□□ -0.3
SEMA4D-220ENST00000492386 ARL2-SNX15V9GYD0 113 aa13.16□□□□□ -0.3
SEMA4D-220ENST00000492386 TEX50A0A1B0GTY4 177 aa13.16□□□□□ -0.3
SEMA4D-220ENST00000492386 TM4SF5O14894 197 aa13.16□□□□□ -0.3
SEMA4D-220ENST00000492386 ZNF90Q03938 601 aa13.16□□□□□ -0.3
SEMA4D-220ENST00000492386 IGF2-ASQ6U949 168 aa13.16□□□□□ -0.3
SEMA4D-220ENST00000492386 ZNF503Q96F45 646 aa13.16□□□□□ -0.3
SEMA4D-220ENST00000492386 SLC35D1Q9NTN3 355 aa13.16□□□□□ -0.3
SEMA4D-220ENST00000492386 CBLN1P23435 193 aa13.15□□□□□ -0.3
SEMA4D-220ENST00000492386 SELENOVP59797 346 aa13.15□□□□□ -0.3
SEMA4D-220ENST00000492386 RAB4BP61018 213 aa13.15□□□□□ -0.3
SEMA4D-220ENST00000492386 SELENOTP62341 195 aa13.15□□□□□ -0.3
SEMA4D-220ENST00000492386 PSG5Q15238 335 aa13.15□□□□□ -0.3
SEMA4D-220ENST00000492386 RTL8BQ17RB0 113 aa13.15□□□□□ -0.3
SEMA4D-220ENST00000492386 IQCJQ1A5X6 159 aa13.15□□□□□ -0.3
SEMA4D-220ENST00000492386 NDUFAF3Q9BU61 184 aa13.15□□□□□ -0.3
SEMA4D-220ENST00000492386 LGALS4P56470 323 aa13.15□□□□□ -0.3
SEMA4D-220ENST00000492386 FAM27E3Q08E93 113 aa13.15□□□□□ -0.3
SEMA4D-220ENST00000492386 TMEM30BQ3MIR4 351 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms