RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 TECRQ9NZ01 308 aaKnown RBP10.56□□□□□ -0.72
VPS52-218ENST00000482399 ARL2-SNX15V9GYD0 113 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 C20orf202A1L168 122 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 CA2P00918 260 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 EFNB3Q15768 340 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 LINC00479Q96M42 142 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 MIEN1Q9BRT3 115 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 NRN1Q9NPD7 142 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 IL36BQ9NZH7 164 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 WIPI2Q9Y4P8 454 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 IGKV3D-15A0A087WSY6 115 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 UBE2L3P68036 154 aaKnown RBP10.56□□□□□ -0.72
VPS52-218ENST00000482399 PAFAH1B2P68402 229 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 VAMP3Q15836 100 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 ZNF766Q5HY98 468 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 COL5A1-AS1Q5SY13 56 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 ETFRF1Q6IPR1 90 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 OR2D3Q8NGH3 330 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 SSBP4Q9BWG4 385 aaPredicted RBP10.56□□□□□ -0.72
VPS52-218ENST00000482399 KRTAP27-1Q3LI81 207 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 ACP7Q6ZNF0 438 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 CXXC4Q9H2H0 198 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 ZNF355PQ9NSJ1 428 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 CBY1Q9Y3M2 126 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 M0QZK8 103 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 M0R1B8 84 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 IBA57Q5T440 356 aaKnown RBP10.55□□□□□ -0.72
VPS52-218ENST00000482399 OR5B3Q8NH48 314 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 ZNRD1Q9P1U0 126 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 TRBV6-6A0A0A6YYG2 114 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 J3QR06 171 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 MLNRO43193 412 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 IGHV1-2P23083 117 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 ZNF137PP52743 207 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 FOXA3P55318 350 aaPredicted RBP10.55□□□□□ -0.72
VPS52-218ENST00000482399 MRPS11P82912 194 aaKnown RBP10.55□□□□□ -0.72
VPS52-218ENST00000482399 ZNF146Q15072 292 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 COA6Q5JTJ3 125 aaKnown RBP10.55□□□□□ -0.72
VPS52-218ENST00000482399 EAF1Q96JC9 268 aaPredicted RBP10.55□□□□□ -0.72
VPS52-218ENST00000482399 LPAR2Q9HBW0 351 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 MBNL3Q9NUK0 354 aaKnown RBP10.55□□□□□ -0.72
VPS52-218ENST00000482399 FBXL7Q9UJT9 491 aa10.55□□□□□ -0.72
VPS52-218ENST00000482399 EXPH5Q8NEV8 1989 aa10.54□□□□□ -0.72
VPS52-218ENST00000482399 PCNX2A6NKB5 2137 aa10.54□□□□□ -0.72
VPS52-218ENST00000482399 M0R2Z0 102 aa10.54□□□□□ -0.72
VPS52-218ENST00000482399 DUTP33316 252 aaKnown RBP10.54□□□□□ -0.72
VPS52-218ENST00000482399 RPL15P61313 204 aaKnown RBP10.54□□□□□ -0.72
VPS52-218ENST00000482399 NABP2Q9BQ15 211 aa10.54□□□□□ -0.72
VPS52-218ENST00000482399 SH3BGRL2Q9UJC5 107 aa10.54□□□□□ -0.72
VPS52-218ENST00000482399 LOC400499M0QZD8 3231 aa10.54□□□□□ -0.72
VPS52-218ENST00000482399 CSN3P07498 182 aa10.54□□□□□ -0.72
VPS52-218ENST00000482399 STAG3L2P0CL84 134 aa10.54□□□□□ -0.72
VPS52-218ENST00000482399 STAG3L3P0CL85 134 aa10.54□□□□□ -0.72
VPS52-218ENST00000482399 FOXL1Q12952 345 aa10.54□□□□□ -0.72
VPS52-218ENST00000482399 VWA1Q6PCB0 445 aa10.54□□□□□ -0.72
VPS52-218ENST00000482399 WDR82Q6UXN9 313 aa10.54□□□□□ -0.72
VPS52-218ENST00000482399 RBMXL3Q8N7X1 1067 aaKnown RBP10.54□□□□□ -0.72
VPS52-218ENST00000482399 ENSAO43768 121 aaKnown RBP10.53□□□□□ -0.72
VPS52-218ENST00000482399 APCSP02743 223 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 NRN1LQ496H8 165 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 DNLZQ5SXM8 178 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 SLC35E4Q6ICL7 350 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 OR4S2Q8NH73 311 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 OPN3Q9H1Y3 402 aaPredicted RBP10.53□□□□□ -0.72
VPS52-218ENST00000482399 IL19Q9UHD0 177 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 TRAV5A0A0B4J249 113 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 K7EN84 100 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 TNFSF13O75888 250 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 ORM2P19652 201 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 BRWD1-AS2P59051 145 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 MAJINQ3KP22 176 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 RCHY1Q96PM5 261 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 SLC45A2Q9UMX9 530 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 C9orf172C9J069 976 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 TYMSP04818 313 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 OPRK1P41145 380 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 PMCHL1Q16048 86 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 H1FXQ92522 213 aaKnown RBP10.53□□□□□ -0.72
VPS52-218ENST00000482399 COMMD5Q9GZQ3 224 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 OR51B2Q9Y5P1 312 aa10.53□□□□□ -0.72
VPS52-218ENST00000482399 NAV3Q8IVL0 2385 aa10.52□□□□□ -0.72
VPS52-218ENST00000482399 DPRXA6NFQ7 191 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 PMS2P5A8MQ11 134 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 NTN3O00634 580 aaPredicted RBP10.52□□□□□ -0.73
VPS52-218ENST00000482399 CYC1P08574 325 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 RNFT1Q5M7Z0 435 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 STUMQ69YW2 141 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 UNQ5815/PRO19632Q6UWF5 114 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 OR9G1Q8NH87 305 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 APC2O95996 2303 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 HCFC1P51610 2035 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 GFRA3O60609 400 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 SFTPCP11686 197 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 RAB4AP20338 218 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 UBE2G1P62253 170 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 FER1L6-AS2Q96M78 137 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 SPRR3Q9UBC9 169 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 NCKAP5O14513 1909 aa10.52□□□□□ -0.73
VPS52-218ENST00000482399 COX7A2P2O60397 106 aa10.51□□□□□ -0.73
VPS52-218ENST00000482399 MPDU1O75352 247 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms