RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 PPP1R27Q86WC6 154 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 MRPL41Q8IXM3 137 aaKnown RBP7.52□□□□□ -1.21
VPS52-216ENST00000471309 DYNAPQ8N1N2 210 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 Q8N6K4 173 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 LINC01356Q8N9X3 169 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 NPBQ8NG41 125 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 TMEM170AQ8WVE7 144 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 PCNPQ8WW12 178 aaKnown RBP7.52□□□□□ -1.21
VPS52-216ENST00000471309 EAF1Q96JC9 268 aaPredicted RBP7.52□□□□□ -1.21
VPS52-216ENST00000471309 GGACTQ9BVM4 153 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 HINT2Q9BX68 163 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 SH3BGRL3Q9H299 93 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 UQCC1Q9NVA1 299 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 ABCA2Q9BZC7 2435 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 TET2Q6N021 2002 aaPredicted RBP7.52□□□□□ -1.21
VPS52-216ENST00000471309 DCHS2Q6V1P9 2916 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 TRAV40A0A0B4J280 105 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 UBE2L5PA0A1B0GUS4 154 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 CGB1A6NKQ9 187 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 J3QLI3 93 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 ACTL6BO94805 426 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 CA2P00918 260 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 OPN1MWP04001 364 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 OPN1MW2P0DN77 364 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 OPN1MW3P0DN78 364 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 BRS3P32247 399 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 COMPP49747 757 aaPredicted RBP7.51□□□□□ -1.21
VPS52-216ENST00000471309 RAB5CP51148 216 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 DLK1P80370 383 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 LRRC75BQ2VPJ9 315 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 C2orf83Q53S99 150 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 C10orf55Q5SWW7 151 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 SLC25A24Q6NUK1 477 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 ETV3LQ6ZN32 361 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 KRTAP1-3Q8IUG1 177 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 SCGB1C1Q8TD33 95 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 C17orf50Q8WW18 174 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 SAT2Q96F10 170 aaPredicted RBP7.51□□□□□ -1.21
VPS52-216ENST00000471309 CXorf58Q96LI9 332 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 PSMG3Q9BT73 122 aaPredicted RBP7.51□□□□□ -1.21
VPS52-216ENST00000471309 WDR61Q9GZS3 305 aaKnown RBP7.51□□□□□ -1.21
VPS52-216ENST00000471309 KIAA1456Q9P272 454 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 TIMM9Q9Y5J7 89 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 ARHGAP32A7KAX9 2087 aa7.51□□□□□ -1.21
VPS52-216ENST00000471309 ARID1AO14497 2285 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 ZNF705EA8MWA4 302 aaPredicted RBP7.5□□□□□ -1.21
VPS52-216ENST00000471309 UMAD1C9J7I0 102 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 FNDC10F2Z333 226 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 TRIM77I1YAP6 450 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 FAM106CPP0CH98 169 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 RNASE2P10153 161 aaKnown RBP7.5□□□□□ -1.21
VPS52-216ENST00000471309 MDKP21741 143 aaPredicted RBP7.5□□□□□ -1.21
VPS52-216ENST00000471309 SNCAP37840 140 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 RPL27AP46776 148 aaKnown RBP7.5□□□□□ -1.21
VPS52-216ENST00000471309 ERHP84090 104 aaKnown RBP7.5□□□□□ -1.21
VPS52-216ENST00000471309 RUNX1Q01196 453 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 WT1-ASQ06250 92 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 PJVKQ0ZLH3 352 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 HES1Q14469 280 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 PLGLAQ15195 96 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 TNXAQ16473 311 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 HSD17B13Q7Z5P4 300 aaPredicted RBP7.5□□□□□ -1.21
VPS52-216ENST00000471309 COMMD7Q86VX2 200 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 ZNF114Q8NC26 417 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 OR10W1Q8NGF6 305 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 OR2G3Q8NGZ4 309 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 SRSF8Q9BRL6 282 aaKnown RBP7.5□□□□□ -1.21
VPS52-216ENST00000471309 REG4Q9BYZ8 158 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 FBXL15Q9H469 300 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 C7orf69Q9H7B7 122 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 PARP11Q9NR21 331 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 HIF1ANQ9NWT6 349 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 PLA2G2EQ9NZK7 142 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 PFDN2Q9UHV9 154 aa7.5□□□□□ -1.21
VPS52-216ENST00000471309 SPTAN1Q13813 2472 aaKnown RBP7.5□□□□□ -1.21
VPS52-216ENST00000471309 A0A1B0GW64 132 aa7.49□□□□□ -1.21
VPS52-216ENST00000471309 IGLC7A0M8Q6 106 aa7.49□□□□□ -1.21
VPS52-216ENST00000471309 RNF223E7ERA6 249 aa7.49□□□□□ -1.21
VPS52-216ENST00000471309 E7EUB6 86 aa7.49□□□□□ -1.21
VPS52-216ENST00000471309 IFNA4P05014 189 aa7.49□□□□□ -1.21
VPS52-216ENST00000471309 TMEM11P17152 192 aa7.49□□□□□ -1.21
VPS52-216ENST00000471309 PAX6P26367 422 aa7.49□□□□□ -1.21
VPS52-216ENST00000471309 SUB1P53999 127 aaKnown RBP eCLIP7.49□□□□□ -1.21
VPS52-216ENST00000471309 BLOC1S1P78537 153 aa7.49□□□□□ -1.21
VPS52-216ENST00000471309 SSBP2P81877 361 aaPredicted RBP7.49□□□□□ -1.21
VPS52-216ENST00000471309 C5orf64Q2M2E5 130 aa7.49□□□□□ -1.21
VPS52-216ENST00000471309 FBLN7Q53RD9 439 aa7.49□□□□□ -1.21
VPS52-216ENST00000471309 TMEM182Q6ZP80 229 aaPredicted RBP7.49□□□□□ -1.21
VPS52-216ENST00000471309 Q6ZRG5 221 aa7.49□□□□□ -1.21
VPS52-216ENST00000471309 CENPVQ7Z7K6 275 aaPredicted RBP7.49□□□□□ -1.21
VPS52-216ENST00000471309 TAF15Q92804 592 aaKnown RBP eCLIP7.49□□□□□ -1.21
VPS52-216ENST00000471309 Q96MF0 132 aa7.49□□□□□ -1.21
VPS52-216ENST00000471309 WDR83OSQ9Y284 106 aa7.49□□□□□ -1.21
VPS52-216ENST00000471309 MYO9AB2RTY4 2548 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 NUDT19A8MXV4 375 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 TEX22C9J3V5 150 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 SOX15O60248 233 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 MPDU1O75352 247 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 IGHV4-31P0DP07 118 aa7.48□□□□□ -1.21
VPS52-216ENST00000471309 FGF7P21781 194 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms