RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 MS4A10Q96PG2 267 aa15.44■□□□□ 0.06
COL9A3-204ENST00000463487 HINT2Q9BX68 163 aa15.44■□□□□ 0.06
COL9A3-204ENST00000463487 KLK15Q9H2R5 256 aa15.44■□□□□ 0.06
COL9A3-204ENST00000463487 TEX50A0A1B0GTY4 177 aa15.43■□□□□ 0.06
COL9A3-204ENST00000463487 C13orf42A0A1B0GVH6 325 aa15.43■□□□□ 0.06
COL9A3-204ENST00000463487 HMX3A6NHT5 357 aa15.43■□□□□ 0.06
COL9A3-204ENST00000463487 DEFA4P12838 97 aa15.43■□□□□ 0.06
COL9A3-204ENST00000463487 MECP2P51608 486 aaKnown RBP15.43■□□□□ 0.06
COL9A3-204ENST00000463487 SUPT4H1P63272 117 aaKnown RBP15.43■□□□□ 0.06
COL9A3-204ENST00000463487 ASAH1Q13510 395 aa15.43■□□□□ 0.06
COL9A3-204ENST00000463487 ZNF429Q86V71 674 aa15.43■□□□□ 0.06
COL9A3-204ENST00000463487 A0A0B4J2A0 478 aa15.42■□□□□ 0.06
COL9A3-204ENST00000463487 FAM240BA0A1B0GVZ2 78 aa15.42■□□□□ 0.06
COL9A3-204ENST00000463487 DUXBA0A1W2PPF3 345 aa15.42■□□□□ 0.06
COL9A3-204ENST00000463487 FAM223BA6NKX1 122 aa15.42■□□□□ 0.06
COL9A3-204ENST00000463487 SFT2D2O95562 160 aa15.42■□□□□ 0.06
COL9A3-204ENST00000463487 PSMB6P28072 239 aa15.42■□□□□ 0.06
COL9A3-204ENST00000463487 TREML4Q6UXN2 200 aa15.42■□□□□ 0.06
COL9A3-204ENST00000463487 FAM223AQ8IWN6 122 aa15.42■□□□□ 0.06
COL9A3-204ENST00000463487 SLC35G3Q8N808 338 aa15.42■□□□□ 0.06
COL9A3-204ENST00000463487 CASTOR1Q8WTX7 329 aa15.42■□□□□ 0.06
COL9A3-204ENST00000463487 USMG5Q96IX5 58 aa15.42■□□□□ 0.06
COL9A3-204ENST00000463487 C20orf85Q9H1P6 137 aa15.42■□□□□ 0.06
COL9A3-204ENST00000463487 NDUFA4L2Q9NRX3 87 aa15.42■□□□□ 0.06
COL9A3-204ENST00000463487 SHPKQ9UHJ6 478 aa15.42■□□□□ 0.06
COL9A3-204ENST00000463487 IFNA17P01571 189 aa15.41■□□□□ 0.06
COL9A3-204ENST00000463487 HLA-AP01891 365 aaKnown RBP15.41■□□□□ 0.06
COL9A3-204ENST00000463487 TCRBP04435 133 aa15.41■□□□□ 0.06
COL9A3-204ENST00000463487 MYOD1P15172 320 aa15.41■□□□□ 0.06
COL9A3-204ENST00000463487 HIST1H1BP16401 226 aaKnown RBP15.41■□□□□ 0.06
COL9A3-204ENST00000463487 PPP1R1AQ13522 171 aa15.41■□□□□ 0.06
COL9A3-204ENST00000463487 C4orf46Q504U0 113 aa15.41■□□□□ 0.06
COL9A3-204ENST00000463487 C8orf86Q6ZUL3 223 aa15.41■□□□□ 0.06
COL9A3-204ENST00000463487 LHFPL5Q8TAF8 219 aa15.41■□□□□ 0.06
COL9A3-204ENST00000463487 ENKURQ8TC29 256 aa15.41■□□□□ 0.06
COL9A3-204ENST00000463487 PLEKHA3Q9HB20 300 aa15.41■□□□□ 0.06
COL9A3-204ENST00000463487 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.41■□□□□ 0.06
COL9A3-204ENST00000463487 THYN1Q9P016 225 aa15.41■□□□□ 0.06
COL9A3-204ENST00000463487 IGLC7A0M8Q6 106 aa15.4■□□□□ 0.06
COL9A3-204ENST00000463487 E7EUB6 86 aa15.4■□□□□ 0.06
COL9A3-204ENST00000463487 CRYGCP07315 174 aa15.4■□□□□ 0.06
COL9A3-204ENST00000463487 P0C879 139 aa15.4■□□□□ 0.06
COL9A3-204ENST00000463487 OR13C7P0DN81 318 aa15.4■□□□□ 0.06
COL9A3-204ENST00000463487 AREGP15514 252 aa15.4■□□□□ 0.06
COL9A3-204ENST00000463487 MYCNOSP40205 109 aa15.4■□□□□ 0.06
COL9A3-204ENST00000463487 HSPE1P61604 102 aaKnown RBP15.4■□□□□ 0.06
COL9A3-204ENST00000463487 PRCDQ00LT1 54 aa15.4■□□□□ 0.06
COL9A3-204ENST00000463487 RUNX1Q01196 453 aa15.4■□□□□ 0.06
COL9A3-204ENST00000463487 NECAP1Q8NC96 275 aa15.4■□□□□ 0.06
COL9A3-204ENST00000463487 OR1L6Q8NGR2 347 aa15.4■□□□□ 0.06
COL9A3-204ENST00000463487 COQ8AQ8NI60 647 aa15.4■□□□□ 0.06
COL9A3-204ENST00000463487 TBC1D24Q9ULP9 559 aa15.4■□□□□ 0.06
COL9A3-204ENST00000463487 A0A0B4J293 547 aa15.39■□□□□ 0.05
COL9A3-204ENST00000463487 A0A1B0GW64 132 aa15.39■□□□□ 0.05
COL9A3-204ENST00000463487 CGB1A6NKQ9 187 aa15.39■□□□□ 0.05
COL9A3-204ENST00000463487 LGALS1P09382 135 aaKnown RBP15.39■□□□□ 0.05
COL9A3-204ENST00000463487 OR4E1P0C645 316 aa15.39■□□□□ 0.05
COL9A3-204ENST00000463487 CTRB1P17538 263 aa15.39■□□□□ 0.05
COL9A3-204ENST00000463487 IZUMO4Q1ZYL8 232 aa15.39■□□□□ 0.05
COL9A3-204ENST00000463487 FAM209BQ5JX69 171 aa15.39■□□□□ 0.05
COL9A3-204ENST00000463487 CTRB2Q6GPI1 263 aa15.39■□□□□ 0.05
COL9A3-204ENST00000463487 LRTM2Q8N967 370 aa15.39■□□□□ 0.05
COL9A3-204ENST00000463487 ENY2Q9NPA8 101 aa15.39■□□□□ 0.05
COL9A3-204ENST00000463487 NUDT15Q9NV35 164 aa15.39■□□□□ 0.05
COL9A3-204ENST00000463487 CACNG5Q9UF02 275 aa15.39■□□□□ 0.05
COL9A3-204ENST00000463487 FLVCR2Q9UPI3 526 aa15.39■□□□□ 0.05
COL9A3-204ENST00000463487 DNHD1Q96M86 4753 aa15.38■□□□□ 0.05
COL9A3-204ENST00000463487 C9orf170A2RU37 121 aa15.38■□□□□ 0.05
COL9A3-204ENST00000463487 CCL24O00175 119 aa15.38■□□□□ 0.05
COL9A3-204ENST00000463487 REG1AP05451 166 aa15.38■□□□□ 0.05
COL9A3-204ENST00000463487 SULT1A3P0DMM9 295 aa15.38■□□□□ 0.05
COL9A3-204ENST00000463487 SULT1A4P0DMN0 295 aa15.38■□□□□ 0.05
COL9A3-204ENST00000463487 ERHP84090 104 aaKnown RBP15.38■□□□□ 0.05
COL9A3-204ENST00000463487 RHOGP84095 191 aa15.38■□□□□ 0.05
COL9A3-204ENST00000463487 KIAA0141Q14154 515 aaPredicted RBP15.38■□□□□ 0.05
COL9A3-204ENST00000463487 LYG2Q86SG7 212 aa15.38■□□□□ 0.05
COL9A3-204ENST00000463487 OR10W1Q8NGF6 305 aa15.38■□□□□ 0.05
COL9A3-204ENST00000463487 DPF1Q92782 380 aa15.38■□□□□ 0.05
COL9A3-204ENST00000463487 ALX4Q9H161 411 aaPredicted RBP15.38■□□□□ 0.05
COL9A3-204ENST00000463487 GNB4Q9HAV0 340 aa15.38■□□□□ 0.05
COL9A3-204ENST00000463487 PRR13Q9NZ81 148 aa15.38■□□□□ 0.05
COL9A3-204ENST00000463487 TRBV9A0A0B4J1U6 114 aa15.37■□□□□ 0.05
COL9A3-204ENST00000463487 ST8SIA3O43173 380 aa15.37■□□□□ 0.05
COL9A3-204ENST00000463487 DUS4LO95620 317 aaKnown RBP15.37■□□□□ 0.05
COL9A3-204ENST00000463487 ANXA7P20073 488 aaKnown RBP15.37■□□□□ 0.05
COL9A3-204ENST00000463487 HOXA1P49639 335 aaPredicted RBP15.37■□□□□ 0.05
COL9A3-204ENST00000463487 ATP5G2Q06055 141 aa15.37■□□□□ 0.05
COL9A3-204ENST00000463487 DHRS2Q13268 280 aa15.37■□□□□ 0.05
COL9A3-204ENST00000463487 C18orf65Q6ZTR6 163 aa15.37■□□□□ 0.05
COL9A3-204ENST00000463487 LYZL2Q7Z4W2 148 aa15.37■□□□□ 0.05
COL9A3-204ENST00000463487 GPR146Q96CH1 333 aa15.37■□□□□ 0.05
COL9A3-204ENST00000463487 OR5B12Q96R08 314 aa15.37■□□□□ 0.05
COL9A3-204ENST00000463487 TMED3Q9Y3Q3 217 aa15.37■□□□□ 0.05
COL9A3-204ENST00000463487 TRAV6A0A075B6T7 132 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 A0A0G2JRQ6 117 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 A0A1B0GU03 582 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 DBX1A6NMT0 343 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 I3L521 148 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 IGHV3-11P01762 117 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 PRH1P02810 166 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 302.4 ms