RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 IGF2RP11717 2491 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 CCL1P22362 96 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 PTPRZ1P23471 2315 aaPredicted RBP-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 MIPP30301 263 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 S100A7P31151 101 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 CSN1S1P47710 185 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 RAB13P51153 203 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 FXYD2P54710 66 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 CLDN12P56749 244 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 FABP5Q01469 135 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 KMT2AQ03164 3969 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 KCNJ8Q15842 424 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 NDUFA5Q16718 116 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 EXOC3L4Q17RC7 722 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 MPV17LQ2QL34 196 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 TNFAIP8L3Q5GJ75 292 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 C1orf137Q5JT78 98 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 LPCAT4Q643R3 524 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 CLECL1Q8IZS7 167 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 TMEM156Q8N614 296 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 OR10D3Q8NH80 312 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 SLC37A2Q8TED4 501 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 MUC4Q99102 2169 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 TMEM147Q9BVK8 224 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 UGT2B28Q9BY64 529 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 SLC22A4Q9H015 551 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 METTL8Q9H825 291 aaKnown RBP-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 TP73-AS1Q9UF72 201 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 FUT9Q9Y231 359 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 MTUS2Q5JR59 1369 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 LOC285556D6RIA3 1793 aa-0.34□□□□□ -2.46
SNHG3-203ENST00000447507 C5orf67F2Z3F1 127 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 SYNGR1O43759 233 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 UGT2B11O75310 529 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 TCL1BO95988 128 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 CD3DP04234 171 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 IL6P05231 212 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 METTL15P1P0C7V9 234 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 LINC00614P0C842 121 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 FAM228BP0C875 321 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 MGST1P10620 155 aaKnown RBP-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 NQO2P16083 231 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 CD40LGP29965 261 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 HOXA6P31267 233 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 HAAOP46952 286 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 ZNF80P51504 273 aaPredicted RBP-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 OR4D2P58180 307 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 RAB8AP61006 207 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 RPS24P62847 133 aaKnown RBP-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 TNNC1P63316 161 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 TNFAIP6P98066 277 aaPredicted RBP-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 DMTNQ08495 405 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 STX3Q13277 289 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 NKAIN1Q4KMZ8 207 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 HSP90AA4PQ58FG1 418 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 C1orf194Q5T5A4 169 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 SYPL2Q5VXT5 272 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 SBSNQ6UWP8 590 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 BPIFA4PQ86YQ2 179 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 TBC1D19Q8N5T2 526 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 OR7G1Q8NGA0 311 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 OR2T4Q8NH00 348 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 CCDC12Q8WUD4 166 aaPredicted RBP-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 SFT2D1Q8WV19 159 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 EEF1AKMT1Q8WVE0 214 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 TMEM239Q8WW34 195 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 ANKRD36BP1Q96IX9 119 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 SERPINB11Q96P15 392 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 WDR54Q9H977 334 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 BZW2Q9Y6E2 419 aaKnown RBP-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 A0A1W2PP64 1363 aa-0.35□□□□□ -2.47
SNHG3-203ENST00000447507 NSD1Q96L73 2696 aaPredicted RBP-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 PIEZO1Q92508 2521 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 SCN3AQ9NY46 2000 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 TNXBP22105 4242 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 TRAV12-1A0A0B4J245 112 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 GOLGA8QA0A0J9YX86 632 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 C1orf232A0A0U1RR37 186 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 DAPL1A0PJW8 107 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 FUOMA2VDF0 154 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 TLCD2A6NGC4 264 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 SMLR1H3BR10 107 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 UBL3O95164 117 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 YEATS4O95619 227 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 OTCP00480 354 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 IGLV3-1P01715 115 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 CCL2P13500 99 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 MIFP14174 115 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 PVALBP20472 110 aaPredicted RBP-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 SYT1P21579 422 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 CFL1P23528 166 aaKnown RBP-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 RHOGP84095 191 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 RPL18Q07020 188 aaKnown RBP-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 STK38Q15208 465 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 VAMP3Q15836 100 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 LRRC26Q2I0M4 334 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 HLA-DRB5Q30154 266 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 ASB16-AS1Q495Z4 193 aa-0.36□□□□□ -2.47
SNHG3-203ENST00000447507 LINC00575Q6W349 94 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms