RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 TET2Q6N021 2002 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 IGHV1-3A0A0C4DH29 117 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 IGSF23A1L1A6 192 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 LINC00862A6NCI5 91 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 ODF3BA8MYP8 253 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 UMAD1C9J7I0 102 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 TSPAN9O75954 239 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 CST7O76096 145 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 TMEM50AO95807 157 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 CFDP00746 253 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 IGKV1-16P04430 117 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 OR8U8P0C7N1 319 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 OR9G9P0C7N8 305 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 SEC11BP0C7V7 166 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 S100A1P23297 94 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 GATA3P23771 443 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 ZFP36P26651 326 aaKnown RBP3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 BRS3P32247 399 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 SNCAP37840 140 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 HTR2BP41595 481 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 REG1BP48304 166 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 HOXA1P49639 335 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 RAB5CP51148 216 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 DYNLT3P51808 116 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 UBE2E1P51965 193 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 DVL1P1P54792 670 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 F2RL1P55085 397 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 RAB11AP62491 216 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 RPL8P62917 257 aaKnown RBP3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 BLOC1S1P78537 153 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 NHLH2Q02577 135 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 PAX8Q06710 450 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 HABP2Q14520 560 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 CLEC12BQ2HXU8 276 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 SPANXN5Q5MJ07 72 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 RPL7L1Q6DKI1 246 aaKnown RBP3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 SLC25A24Q6NUK1 477 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 ALKAL2Q6UX46 152 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 TMEM14EPQ6UXP3 125 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 SSX9Q7RTT3 188 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 VMO1Q7Z5L0 202 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 KRTAP1-3Q8IUG1 177 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 MMD2Q8IY49 270 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 VKORC1L1Q8N0U8 176 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 OR4P4Q8NGL7 312 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 OR5C1Q8NGR4 320 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 OR1L8Q8NGR8 309 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 SCGB1C1Q8TD33 95 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 CFHR4Q92496 578 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 MALSU1Q96EH3 234 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 SAT2Q96F10 170 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 PERPQ96FX8 193 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 HARBI1Q96MB7 349 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 ATP5SQ99766 215 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 GINS3Q9BRX5 216 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 GGACTQ9BVM4 153 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 QTRT1Q9BXR0 403 aaKnown RBP3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 PARD6GQ9BYG4 376 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 SMIM3Q9BZL3 60 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 PLEKHA3Q9HB20 300 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 SIRT7Q9NRC8 400 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 MED9Q9NWA0 146 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 TCF19Q9Y242 345 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 OR51B2Q9Y5P1 312 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 FBN2P35556 2912 aa3.2□□□□□ -1.9
HMGB1P37-201ENST00000439613 ITPR3Q14573 2671 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 ABCA2Q9BZC7 2435 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 IGHV4-30-2A0A087WSY4 118 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 IGHV4-61A0A0C4DH41 118 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 TEX50A0A1B0GTY4 177 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 A0A1W2PN81 502 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 A0A1W2PPI3 338 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 B4DSR2 109 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 FNDC10F2Z333 226 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 INS-IGF2F8WCM5 200 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 RNASEK-C17orf49H0YIS7 233 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 H3BP45 60 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 TRIM77I1YAP6 450 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 J3QLI3 93 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 TIMM23O14925 209 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 FGF16O43320 207 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 SOX15O60248 233 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 ATP6V1G1O75348 118 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 MPDU1O75352 247 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 ACTL6BO94805 426 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 NXPH3O95157 252 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 MOSP00540 346 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 IFNA10P01566 189 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 IGLV2-23P01705 113 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 MSMBP08118 114 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 SNRNP70P08621 437 aaKnown RBP3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 NMBP08949 121 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 METTL15P1P0C7V9 234 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 FAM106CPP0CH98 169 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 SAA1P0DJI8 122 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 IAPPP10997 89 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 CHRNA7P36544 502 aa3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 VDAC2P45880 294 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 COMPP49747 757 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P37-201ENST00000439613 SUB1P53999 127 aaKnown RBP eCLIP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms