RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 SP6Q3SY56 376 aa13.37□□□□□ -0.27
CTSD-203ENST00000429746 ZFAND1Q8TCF1 268 aa13.37□□□□□ -0.27
CTSD-203ENST00000429746 GLYATL2Q8WU03 294 aa13.37□□□□□ -0.27
CTSD-203ENST00000429746 PRRT1Q99946 306 aa13.37□□□□□ -0.27
CTSD-203ENST00000429746 MCRIP2Q9BUT9 160 aaKnown RBP13.37□□□□□ -0.27
CTSD-203ENST00000429746 CRYM-AS1A6NIL9 109 aa13.36□□□□□ -0.27
CTSD-203ENST00000429746 HOXD3P31249 432 aaPredicted RBP13.36□□□□□ -0.27
CTSD-203ENST00000429746 ECI1P42126 302 aa13.36□□□□□ -0.27
CTSD-203ENST00000429746 SUPT4H1P63272 117 aaKnown RBP13.36□□□□□ -0.27
CTSD-203ENST00000429746 USMG5Q96IX5 58 aa13.36□□□□□ -0.27
CTSD-203ENST00000429746 SRSF8Q9BRL6 282 aaKnown RBP13.36□□□□□ -0.27
CTSD-203ENST00000429746 QTRT1Q9BXR0 403 aaKnown RBP13.36□□□□□ -0.27
CTSD-203ENST00000429746 ZMAT5Q9UDW3 170 aaKnown RBP13.36□□□□□ -0.27
CTSD-203ENST00000429746 A0A0B4J293 547 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 A0A0G2JLM5 398 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 FAM223BA6NKX1 122 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 OR2J3O76001 311 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 NDUFB8O95169 186 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 CDS2O95674 445 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 OR5AC1P0C628 307 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 S100GP29377 79 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 CD40LGP29965 261 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 RAB25P57735 213 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 ERVK-16P61578 105 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 FAM223AQ8IWN6 122 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 NECAP1Q8NC96 275 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 CCDC140Q96MF4 163 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 COMMD5Q9GZQ3 224 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 TMEM222Q9H0R3 208 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 NAA60Q9H7X0 242 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 COPZ2Q9P299 210 aa13.35□□□□□ -0.27
CTSD-203ENST00000429746 C13orf42A0A1B0GVH6 325 aa13.34□□□□□ -0.27
CTSD-203ENST00000429746 BMPR1BO00238 502 aa13.34□□□□□ -0.27
CTSD-203ENST00000429746 SPANXN2Q5MJ10 180 aa13.34□□□□□ -0.27
CTSD-203ENST00000429746 IL34Q6ZMJ4 242 aa13.34□□□□□ -0.27
CTSD-203ENST00000429746 Q6ZRM9 215 aa13.34□□□□□ -0.27
CTSD-203ENST00000429746 SLC25A42Q86VD7 318 aa13.34□□□□□ -0.27
CTSD-203ENST00000429746 CCDC71LQ8N9Z2 235 aa13.34□□□□□ -0.27
CTSD-203ENST00000429746 OR1L8Q8NGR8 309 aa13.34□□□□□ -0.27
CTSD-203ENST00000429746 DPF1Q92782 380 aa13.34□□□□□ -0.27
CTSD-203ENST00000429746 OR51B2Q9Y5P1 312 aa13.34□□□□□ -0.27
CTSD-203ENST00000429746 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.33□□□□□ -0.28
CTSD-203ENST00000429746 ANKRD34BA5PLL1 514 aa13.33□□□□□ -0.28
CTSD-203ENST00000429746 SERPINE2P07093 398 aa13.33□□□□□ -0.28
CTSD-203ENST00000429746 TRAPPC2P0DI81 140 aa13.33□□□□□ -0.28
CTSD-203ENST00000429746 TRAPPC2BP0DI82 140 aa13.33□□□□□ -0.28
CTSD-203ENST00000429746 EXOSC2Q13868 293 aaKnown RBP13.33□□□□□ -0.28
CTSD-203ENST00000429746 KLF5Q13887 457 aaPredicted RBP13.33□□□□□ -0.28
CTSD-203ENST00000429746 C15orf32Q32M92 178 aa13.33□□□□□ -0.28
CTSD-203ENST00000429746 AARDQ4LEZ3 155 aa13.33□□□□□ -0.28
CTSD-203ENST00000429746 TOMM5Q8N4H5 51 aa13.33□□□□□ -0.28
CTSD-203ENST00000429746 OR5B3Q8NH48 314 aa13.33□□□□□ -0.28
CTSD-203ENST00000429746 DEDD2Q8WXF8 326 aa13.33□□□□□ -0.28
CTSD-203ENST00000429746 GALNT14Q96FL9 552 aa13.33□□□□□ -0.28
CTSD-203ENST00000429746 MCUBQ9NWR8 336 aa13.33□□□□□ -0.28
CTSD-203ENST00000429746 SCP2D1Q9UJQ7 156 aa13.33□□□□□ -0.28
CTSD-203ENST00000429746 PRNDQ9UKY0 176 aa13.33□□□□□ -0.28
CTSD-203ENST00000429746 COL7A1Q02388 2944 aa13.33□□□□□ -0.28
CTSD-203ENST00000429746 TEX13DA0A0J9YY54 714 aaPredicted RBP13.32□□□□□ -0.28
CTSD-203ENST00000429746 MFSD2BA6NFX1 497 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 SEC14L6B5MCN3 397 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 K7EIL1 84 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 OVOL1O14753 267 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 B3GALNT1O75752 331 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 BTCP35070 178 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 TMEM187Q14656 261 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 THOC7Q6I9Y2 204 aaKnown RBP13.32□□□□□ -0.28
CTSD-203ENST00000429746 ACSM6Q6P461 480 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 H2BFWTQ7Z2G1 175 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 ZNF429Q86V71 674 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 SELENOHQ8IZQ5 122 aaKnown RBP13.32□□□□□ -0.28
CTSD-203ENST00000429746 ZNF414Q96IQ9 312 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 TMEM56Q96MV1 263 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 TSC22D3Q99576 134 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 RANGRFQ9HD47 186 aaPredicted RBP13.32□□□□□ -0.28
CTSD-203ENST00000429746 PRR13Q9NZ81 148 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 PEF1Q9UBV8 284 aaKnown RBP13.32□□□□□ -0.28
CTSD-203ENST00000429746 FBXL7Q9UJT9 491 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 C14orf166Q9Y224 244 aaKnown RBP13.32□□□□□ -0.28
CTSD-203ENST00000429746 TMEM56-RWDD3S4R434 201 aa13.32□□□□□ -0.28
CTSD-203ENST00000429746 SORL1Q92673 2214 aa13.31□□□□□ -0.28
CTSD-203ENST00000429746 WI2-2373I1.2A0A1W2PRP0 233 aa13.31□□□□□ -0.28
CTSD-203ENST00000429746 OR13C7P0DN81 318 aa13.31□□□□□ -0.28
CTSD-203ENST00000429746 PRCDQ00LT1 54 aa13.31□□□□□ -0.28
CTSD-203ENST00000429746 ATP5G2Q06055 141 aa13.31□□□□□ -0.28
CTSD-203ENST00000429746 DCTN2Q13561 401 aaKnown RBP13.31□□□□□ -0.28
CTSD-203ENST00000429746 CNPY1Q3B7I2 92 aa13.31□□□□□ -0.28
CTSD-203ENST00000429746 LSM10Q969L4 123 aaKnown RBP13.31□□□□□ -0.28
CTSD-203ENST00000429746 S4R3C0 116 aa13.31□□□□□ -0.28
CTSD-203ENST00000429746 F8W735 103 aaPredicted RBP13.3□□□□□ -0.28
CTSD-203ENST00000429746 SNAPC5O75971 98 aa13.3□□□□□ -0.28
CTSD-203ENST00000429746 AP3S2P59780 193 aa13.3□□□□□ -0.28
CTSD-203ENST00000429746 HSPE1P61604 102 aaKnown RBP13.3□□□□□ -0.28
CTSD-203ENST00000429746 DHODHQ02127 395 aa13.3□□□□□ -0.28
CTSD-203ENST00000429746 C9orf66Q5T8R8 295 aa13.3□□□□□ -0.28
CTSD-203ENST00000429746 F11RQ9Y624 299 aaKnown RBP13.3□□□□□ -0.28
CTSD-203ENST00000429746 ST8SIA3O43173 380 aa13.29□□□□□ -0.28
CTSD-203ENST00000429746 IGHV3-23P01764 117 aa13.29□□□□□ -0.28
CTSD-203ENST00000429746 IL7P13232 177 aa13.29□□□□□ -0.28
CTSD-203ENST00000429746 PVRIGQ6DKI7 326 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms