RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 MARC2Q969Z3 335 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 ISOC1Q96CN7 298 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 B9D2Q9BPU9 175 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 SLC25A21Q9BQT8 299 aaPredicted RBP4.92□□□□□ -1.62
USP54-202ENST00000413442 SLIRPQ9GZT3 109 aaKnown RBP4.92□□□□□ -1.62
USP54-202ENST00000413442 NAA50Q9GZZ1 169 aaKnown RBP4.92□□□□□ -1.62
USP54-202ENST00000413442 AKIP1Q9NQ31 210 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 NDUFA4L2Q9NRX3 87 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 TMEM14BQ9NUH8 114 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 TMEM140Q9NV12 185 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 COPZ2Q9P299 210 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 FBXL7Q9UJT9 491 aa4.92□□□□□ -1.62
USP54-202ENST00000413442 C14orf166Q9Y224 244 aaKnown RBP4.92□□□□□ -1.62
USP54-202ENST00000413442 LSM4Q9Y4Z0 139 aaKnown RBP4.92□□□□□ -1.62
USP54-202ENST00000413442 MEGF8Q7Z7M0 2845 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 IGLV11-55A0A075B6I3 123 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 IGHV4OR15-8A0A075B7B6 117 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 A0A087WW49 117 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 TRAV25A0A0B4J276 109 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 C3orf85A0A1B0GTC6 90 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 ANKRD20A5PA0PJZ0 165 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 H3BMQ9 156 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 TNFSF12O43508 249 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 SAP30O75446 220 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 SCGB2A1O75556 95 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 CDS2O95674 445 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 LY86O95711 162 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 RLN1P04808 185 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 PGAM2P15259 253 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 UCP1P25874 307 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 FCGR2BP31994 310 aaPredicted RBP4.91□□□□□ -1.62
USP54-202ENST00000413442 ETV6P41212 452 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 MECP2P51608 486 aaKnown RBP4.91□□□□□ -1.62
USP54-202ENST00000413442 CMC4P56277 68 aaPredicted RBP4.91□□□□□ -1.62
USP54-202ENST00000413442 PIGPP57054 158 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 SRPXP78539 464 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 DEFB136Q30KP8 78 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 C15orf32Q32M92 178 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 ANKRD55Q3KP44 614 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 OR2B11Q5JQS5 317 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 LCN12Q6JVE5 192 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 IDO2Q6ZQW0 420 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 SSX9Q7RTT3 188 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 VKORC1L1Q8N0U8 176 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 Q8N402 240 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 ZNF114Q8NC26 417 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 OR1P1Q8NH06 330 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 OR52E5Q8NH55 327 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 RRNAD1Q96FB5 475 aaKnown RBP4.91□□□□□ -1.62
USP54-202ENST00000413442 SEC22AQ96IW7 307 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 FANCD2OSQ96PS1 177 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 THAP7Q9BT49 309 aaPredicted RBP4.91□□□□□ -1.62
USP54-202ENST00000413442 PDCD10Q9BUL8 212 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 C6orf62Q9GZU0 229 aaPredicted RBP4.91□□□□□ -1.62
USP54-202ENST00000413442 MIXL1Q9H2W2 232 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 GPR132Q9UNW8 380 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 OR51B2Q9Y5P1 312 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 SMAD5-AS1Q9Y6J3 95 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 CEPT1Q9Y6K0 416 aa4.91□□□□□ -1.62
USP54-202ENST00000413442 TEX13DA0A0J9YY54 714 aaPredicted RBP4.9□□□□□ -1.63
USP54-202ENST00000413442 DUXBA0A1W2PPF3 345 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 IGLC7A0M8Q6 106 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 NAP1L6A6NFF2 107 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 C15orf61A6NNL5 157 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 K7EIL1 84 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 K7EMT4 169 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 S1PR2O95136 353 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 IGHV3-11P01762 117 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 OR13C7P0DN81 318 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 ANXA3P12429 323 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 MYOD1P15172 320 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 SNCAP37840 140 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 KRTAP10-11P60412 298 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 AARDQ4LEZ3 155 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 SPANXN2Q5MJ10 180 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 SGPP2Q8IWX5 399 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 GALNT14Q96FL9 552 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 BSCL2Q96G97 398 aaPredicted RBP4.9□□□□□ -1.63
USP54-202ENST00000413442 DUX3Q96PT4 197 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 OR5B12Q96R08 314 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 FXYD6Q9H0Q3 95 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 TMEM222Q9H0R3 208 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.9□□□□□ -1.63
USP54-202ENST00000413442 MRPL27Q9P0M9 148 aaKnown RBP4.9□□□□□ -1.63
USP54-202ENST00000413442 UFC1Q9Y3C8 167 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 F11RQ9Y624 299 aaKnown RBP4.9□□□□□ -1.63
USP54-202ENST00000413442 SORL1Q92673 2214 aa4.9□□□□□ -1.63
USP54-202ENST00000413442 TRAV30A0A087WSZ9 112 aa4.89□□□□□ -1.63
USP54-202ENST00000413442 ANKRD34BA5PLL1 514 aa4.89□□□□□ -1.63
USP54-202ENST00000413442 CCDC160A6NGH7 325 aa4.89□□□□□ -1.63
USP54-202ENST00000413442 HMX3A6NHT5 357 aa4.89□□□□□ -1.63
USP54-202ENST00000413442 A8MWP6 167 aa4.89□□□□□ -1.63
USP54-202ENST00000413442 E7EUB6 86 aa4.89□□□□□ -1.63
USP54-202ENST00000413442 M0QYG6 137 aa4.89□□□□□ -1.63
USP54-202ENST00000413442 OR2J3O76001 311 aa4.89□□□□□ -1.63
USP54-202ENST00000413442 CLEC3BP05452 202 aa4.89□□□□□ -1.63
USP54-202ENST00000413442 GP9P14770 177 aa4.89□□□□□ -1.63
USP54-202ENST00000413442 BMI1P35226 326 aa4.89□□□□□ -1.63
USP54-202ENST00000413442 G6PCP35575 357 aa4.89□□□□□ -1.63
USP54-202ENST00000413442 ARL3P36405 182 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms